FFCP PHASE1:Hg19::chr5:137814096..137814100,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:137814096..137814100,+ | |||
|description=CAGE_peak_at_chr5:137814096..137814100,+ | |description=CAGE_peak_at_chr5:137814096..137814100,+ | ||
|id=chr5:137814096..137814100,+ | |id=chr5:137814096..137814100,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.88e-08!254 | |ontology_enrichment_celltype=CL:0000066!2.88e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.78e-29;1!CL:0000159;1.78e-15;2!CL:1000415;1.78e-15;2!CL:0002563;2.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.33e-29,1;CL:1000415,1.15e-15,2;CL:0000159,1.54e-15,2;CL:0002563,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.70e-07;5 | |||
|ontology_enrichment_disease=DOID:0050687!4.93e-43!143;DOID:14566!3.92e-37!239;DOID:162!3.55e-35!235;DOID:305!1.17e-26!106;DOID:7!1.04e-10!39;DOID:299!3.35e-09!25;DOID:0050686!1.14e-08!137;DOID:3093!4.81e-08!11;DOID:4231!4.35e-07!2;DOID:1907!4.35e-07!2;DOID:3095!5.74e-07!22;DOID:2994!5.74e-07!22 | |ontology_enrichment_disease=DOID:0050687!4.93e-43!143;DOID:14566!3.92e-37!239;DOID:162!3.55e-35!235;DOID:305!1.17e-26!106;DOID:7!1.04e-10!39;DOID:299!3.35e-09!25;DOID:0050686!1.14e-08!137;DOID:3093!4.81e-08!11;DOID:4231!4.35e-07!2;DOID:1907!4.35e-07!2;DOID:3095!5.74e-07!22;DOID:2994!5.74e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.78e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!8.55e-10!7;UBERON:0001173!8.55e-10!7;UBERON:0004912!8.55e-10!7;UBERON:0000344!1.07e-07!12;UBERON:0002394!9.72e-07!4;UBERON:0003928!9.72e-07!4 | |ontology_enrichment_uberon=UBERON:0002294!8.55e-10!7;UBERON:0001173!8.55e-10!7;UBERON:0004912!8.55e-10!7;UBERON:0000344!1.07e-07!12;UBERON:0002394!9.72e-07!4;UBERON:0003928!9.72e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.78e-29;1!UBERON:0004909;1.78e-15;2!UBERON:0002110;8.99e-11;3!UBERON:0001242;2.11e-08;4!UBERON:0002346;2.11e-08;4!UBERON:0000923;2.11e-08;4!UBERON:0010316;2.11e-08;4!UBERON:0001262;2.11e-08;4!UBERON:0004786;2.11e-08;4!UBERON:0004808;2.11e-08;4!UBERON:0001277;2.11e-08;4!UBERON:0005291;2.11e-08;4!UBERON:0002046;5.70e-07;5!UBERON:0002050;5.70e-07;5!UBERON:0005423;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.33e-29,1;UBERON:0004909,1.54e-15,2;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0001242,1.82e-08,4;UBERON:0001262,1.82e-08,4;UBERON:0004786,1.82e-08,4;UBERON:0004808,1.82e-08,4;UBERON:0001277,1.82e-08,4;UBERON:0002046,5.70e-07,5;UBERON:0004117,5.70e-07,5;UBERON:0007689,5.70e-07,5;UBERON:0007123,5.70e-07,5;UBERON:0003091,5.70e-07,5 | |||
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| ||
|short_description=p@chr5:137814096..137814100,+ | |short_description=p@chr5:137814096..137814100,+ | ||
}} | }} |
Latest revision as of 10:15, 30 July 2015
Short description: | p@chr5:137814096..137814100, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:137814096..137814100, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.33e-29 | 1 |
epithelial cell of gall bladder | 1.15e-15 | 2 |
seromucus secreting cell | 1.54e-15 | 2 |
intestinal epithelial cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.33e-29 | 1 |
epithelium of gonad | 1.54e-15 | 2 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
intestinal mucosa | 1.82e-08 | 4 |
wall of intestine | 1.82e-08 | 4 |
gastrointestinal system mucosa | 1.82e-08 | 4 |
gastrointestinal system epithelium | 1.82e-08 | 4 |
intestinal epithelium | 1.82e-08 | 4 |
thyroid gland | 5.70e-07 | 5 |
pharyngeal pouch | 5.70e-07 | 5 |
thyroid diverticulum | 5.70e-07 | 5 |
pharyngeal pouch 2 | 5.70e-07 | 5 |
thyroid primordium | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.33e-29 | 1 |