FFCP PHASE1:Hg19::chr5:14742023..14742037,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:14742023..14742037,-
|short_description=p@chr5:14742023..14742037,-
|description=CAGE_peak_at_chr5:14742023..14742037,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:14742023..14742037,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr5:14742023..14742037,- | |||
|id=chr5:14742023..14742037,- | |||
|ontology_enrichment_celltype=CL:0000242!2.05e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.43e-131;2!CL:0000242;6.43e-131;2!CL:0000312;2.51e-53;5!CL:0000240;1.09e-44;6!CL:0000311;1.09e-44;6!CL:0000079;1.09e-44;6!CL:0000237;1.09e-44;6!CL:0000362;2.87e-30;9!CL:0002159;6.18e-20;14!CL:0000095;5.09e-15;17!CL:0000333;1.71e-14;5!CL:0002319;6.40e-11;25!CL:0002077;1.22e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.99e-131,2;CL:0000312,2.87e-53,5;CL:0000240,1.22e-44,6;CL:0000311,1.22e-44,6;CL:0000079,1.22e-44,6;CL:0000237,1.22e-44,6;CL:0000036,1.22e-44,6;CL:0000357,1.22e-44,6;CL:0000114,1.22e-44,6;CL:0000362,3.09e-30,9;CL:0002159,6.48e-20,14;CL:0000095,5.27e-15,17;CL:0000123,5.27e-15,17;CL:0000333,7.46e-15,41;CL:0002319,6.56e-11,25;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72;CL:0002077,6.80e-09,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.09e-44;6!CL:0000114;1.09e-44;6!CL:0000221;3.40e-08;72!CL:0000133;5.19e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.59e-12;6!DOID:171;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.45e-12,6;DOID:171,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002133!2.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.08e-18;15!UBERON:0007376;1.08e-18;15!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0010371;2.74e-09;31!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.13e-18,15;UBERON:0007376,1.13e-18,15;UBERON:0007383,1.13e-18,15;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0000010,1.12e-08,8;UBERON:0002097,1.47e-07,41;UBERON:0002199,7.52e-07,46;UBERON:0002416,7.52e-07,46 | |||
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| ||
|short_description=p@chr5:14742023..14742037,- | |||
}} | }} |
Latest revision as of 11:15, 30 July 2015
Short description: | p@chr5:14742023..14742037, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:14742023..14742037, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.99e-131 | 2 |
keratinocyte | 2.87e-53 | 5 |
stratified squamous epithelial cell | 1.22e-44 | 6 |
keratin accumulating cell | 1.22e-44 | 6 |
stratified epithelial cell | 1.22e-44 | 6 |
keratinizing barrier epithelial cell | 1.22e-44 | 6 |
epithelial fate stem cell | 1.22e-44 | 6 |
stratified epithelial stem cell | 1.22e-44 | 6 |
surface ectodermal cell | 1.22e-44 | 6 |
epidermal cell | 3.09e-30 | 9 |
general ecto-epithelial cell | 6.48e-20 | 14 |
neuron associated cell | 5.27e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.27e-15 | 17 |
migratory neural crest cell | 7.46e-15 | 41 |
neural cell | 6.56e-11 | 25 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
ecto-epithelial cell | 6.80e-09 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.13e-18 | 15 |
outer epithelium | 1.13e-18 | 15 |
enveloping layer of ectoderm | 1.13e-18 | 15 |
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
peripheral nervous system | 1.12e-08 | 8 |
skin of body | 1.47e-07 | 41 |
integument | 7.52e-07 | 46 |
integumental system | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.45e-12 | 6 |
neuroectodermal tumor | 6.13e-08 | 10 |