FFCP PHASE1:Hg19::chr5:53358788..53358795,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:53358788..53358795,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr5:53358788..53358795,- | |description=CAGE_peak_at_chr5:53358788..53358795,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!1.01e-19!180;CL:0000057!2.44e-16!75;CL:0002620!4.01e-15!23;CL:0000359!4.60e-13!32;CL:0000192!1.27e-11!42;CL:0000514!1.27e-11!42;CL:1000306!3.05e-11!4;CL:0002547!3.05e-11!4;CL:0000393!1.51e-10!60;CL:0000211!1.51e-10!60;CL:0002589!1.89e-10!2;CL:0000187!3.42e-10!54;CL:0000048!9.76e-10!430;CL:0000680!1.57e-09!57;CL:0000056!1.57e-09!57;CL:0000355!1.57e-09!57;CL:0000723!1.72e-09!436;CL:0000034!3.57e-09!444;CL:0000183!3.99e-09!59;CL:0002539!5.03e-08!10 | |ontology_enrichment_celltype=CL:0000055!1.01e-19!180;CL:0000057!2.44e-16!75;CL:0002620!4.01e-15!23;CL:0000359!4.60e-13!32;CL:0000192!1.27e-11!42;CL:0000514!1.27e-11!42;CL:1000306!3.05e-11!4;CL:0002547!3.05e-11!4;CL:0000393!1.51e-10!60;CL:0000211!1.51e-10!60;CL:0002589!1.89e-10!2;CL:0000187!3.42e-10!54;CL:0000048!9.76e-10!430;CL:0000680!1.57e-09!57;CL:0000056!1.57e-09!57;CL:0000355!1.57e-09!57;CL:0000723!1.72e-09!436;CL:0000034!3.57e-09!444;CL:0000183!3.99e-09!59;CL:0002539!5.03e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000346;5.96e-34;3!CL:1000428;5.96e-34;3!CL:1000306;5.56e-26;4!CL:0002547;5.56e-26;4!CL:0002559;5.15e-21;5 | |ontology_enrichment_celltype_v019=CL:0000346;5.96e-34;3!CL:1000428;5.96e-34;3!CL:1000306;5.56e-26;4!CL:0002547;5.56e-26;4!CL:0002559;5.15e-21;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.96e-34,3;CL:1000428,5.96e-34,3;CL:1000306,5.56e-26,4;CL:0002547,5.56e-26,4;CL:0002559,5.15e-21,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!2.80e-09!5;DOID:450!2.80e-09!5;DOID:66!2.80e-09!5;DOID:423!2.80e-09!5;DOID:0080000!2.80e-09!5;DOID:11722!2.80e-09!5 | |ontology_enrichment_disease=DOID:17!2.80e-09!5;DOID:450!2.80e-09!5;DOID:66!2.80e-09!5;DOID:423!2.80e-09!5;DOID:0080000!2.80e-09!5;DOID:11722!2.80e-09!5 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!2.06e-15!33;UBERON:0004571!2.06e-15!33;UBERON:0001637!6.81e-14!42;UBERON:0003509!6.81e-14!42;UBERON:0004572!6.81e-14!42;UBERON:0002097!2.82e-12!40;UBERON:0000415!3.05e-11!4;UBERON:0007240!3.05e-11!4;UBERON:0005742!3.05e-11!4;UBERON:0005734!3.05e-11!4;UBERON:0004664!3.05e-11!4;UBERON:0004663!3.05e-11!4;UBERON:0002199!1.14e-10!45;UBERON:0002416!1.14e-10!45;UBERON:0000055!1.86e-10!69;UBERON:0001529!1.89e-10!2;UBERON:0007204!1.89e-10!2;UBERON:0000947!2.28e-10!21;UBERON:0010191!2.28e-10!21;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0000914!1.39e-09!83;UBERON:0002329!1.39e-09!83;UBERON:0003077!1.39e-09!83;UBERON:0003059!1.39e-09!83;UBERON:0007282!1.39e-09!83;UBERON:0009618!1.39e-09!83;UBERON:0007285!1.39e-09!83;UBERON:0001981!5.45e-09!60;UBERON:0007500!5.45e-09!60;UBERON:0004537!5.45e-09!60;UBERON:0006965!5.45e-09!60;UBERON:0004290!9.06e-09!70;UBERON:0001134!9.52e-09!61;UBERON:0002036!9.52e-09!61;UBERON:0003082!9.52e-09!61;UBERON:0002385!2.15e-08!63;UBERON:0001015!2.15e-08!63;UBERON:0000383!2.15e-08!63;UBERON:0004237!5.03e-08!10;UBERON:0004695!5.03e-08!10;UBERON:0002111!5.03e-08!10;UBERON:0004178!5.03e-08!10;UBERON:0004535!1.67e-07!110;UBERON:0001009!3.24e-07!113;UBERON:0000486!4.19e-07!82;UBERON:0004872!6.75e-07!84 | |ontology_enrichment_uberon=UBERON:0004573!2.06e-15!33;UBERON:0004571!2.06e-15!33;UBERON:0001637!6.81e-14!42;UBERON:0003509!6.81e-14!42;UBERON:0004572!6.81e-14!42;UBERON:0002097!2.82e-12!40;UBERON:0000415!3.05e-11!4;UBERON:0007240!3.05e-11!4;UBERON:0005742!3.05e-11!4;UBERON:0005734!3.05e-11!4;UBERON:0004664!3.05e-11!4;UBERON:0004663!3.05e-11!4;UBERON:0002199!1.14e-10!45;UBERON:0002416!1.14e-10!45;UBERON:0000055!1.86e-10!69;UBERON:0001529!1.89e-10!2;UBERON:0007204!1.89e-10!2;UBERON:0000947!2.28e-10!21;UBERON:0010191!2.28e-10!21;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0000914!1.39e-09!83;UBERON:0002329!1.39e-09!83;UBERON:0003077!1.39e-09!83;UBERON:0003059!1.39e-09!83;UBERON:0007282!1.39e-09!83;UBERON:0009618!1.39e-09!83;UBERON:0007285!1.39e-09!83;UBERON:0001981!5.45e-09!60;UBERON:0007500!5.45e-09!60;UBERON:0004537!5.45e-09!60;UBERON:0006965!5.45e-09!60;UBERON:0004290!9.06e-09!70;UBERON:0001134!9.52e-09!61;UBERON:0002036!9.52e-09!61;UBERON:0003082!9.52e-09!61;UBERON:0002385!2.15e-08!63;UBERON:0001015!2.15e-08!63;UBERON:0000383!2.15e-08!63;UBERON:0004237!5.03e-08!10;UBERON:0004695!5.03e-08!10;UBERON:0002111!5.03e-08!10;UBERON:0004178!5.03e-08!10;UBERON:0004535!1.67e-07!110;UBERON:0001009!3.24e-07!113;UBERON:0000486!4.19e-07!82;UBERON:0004872!6.75e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.96e-34;3!UBERON:0001992;5.96e-34;3!UBERON:0004797;5.56e-26;4!UBERON:0000415;5.56e-26;4!UBERON:0007240;5.56e-26;4!UBERON:0005742;5.56e-26;4!UBERON:0005734;5.56e-26;4!UBERON:0004664;5.56e-26;4!UBERON:0004663;5.56e-26;4!UBERON:0002073;5.15e-21;5!UBERON:0002067;2.45e-12;9!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15!UBERON:0004923;1.47e-07;55 | |ontology_enrichment_uberon_v019=UBERON:0000412;5.96e-34;3!UBERON:0001992;5.96e-34;3!UBERON:0004797;5.56e-26;4!UBERON:0000415;5.56e-26;4!UBERON:0007240;5.56e-26;4!UBERON:0005742;5.56e-26;4!UBERON:0005734;5.56e-26;4!UBERON:0004664;5.56e-26;4!UBERON:0004663;5.56e-26;4!UBERON:0002073;5.15e-21;5!UBERON:0002067;2.45e-12;9!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15!UBERON:0004923;1.47e-07;55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.96e-34,3;UBERON:0001992,5.96e-34,3;UBERON:0000415,5.56e-26,4;UBERON:0007240,5.56e-26,4;UBERON:0005742,5.56e-26,4;UBERON:0005734,5.56e-26,4;UBERON:0004664,5.56e-26,4;UBERON:0004663,5.56e-26,4;UBERON:0002073,5.15e-21,5;UBERON:0005086,5.15e-21,5;UBERON:0004797,1.65e-15,7;UBERON:0002067,2.45e-12,9;UBERON:0004016,2.45e-12,9;UBERON:0010083,2.45e-12,9;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15;UBERON:0004923,2.96e-07,66 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,7.94455084879313,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0.358779271377724,0.640672166455702,0.211931901159562,0,0,0,0.37223371266318,0.337552664482532,0,0.252433774244115,0.368199594569197,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,7.94455084879313,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0.358779271377724,0.640672166455702,0.211931901159562,0,0,0,0.37223371266318,0.337552664482532,0,0.252433774244115,0.368199594569197,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:53358788..53358795,- | |short_description=p@chr5:53358788..53358795,- | ||
}} | }} |
Latest revision as of 15:12, 30 July 2015
Short description: | p@chr5:53358788..53358795, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:53358788..53358795, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.96e-34 | 3 |
stem cell of epidermis | 5.96e-34 | 3 |
fibroblast of tunica adventitia of artery | 5.56e-26 | 4 |
fibroblast of the aortic adventitia | 5.56e-26 | 4 |
hair follicle cell | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.96e-34 | 3 |
papillary layer of dermis | 5.96e-34 | 3 |
artery wall | 5.56e-26 | 4 |
tunica adventitia of artery | 5.56e-26 | 4 |
adventitia | 5.56e-26 | 4 |
tunica adventitia of blood vessel | 5.56e-26 | 4 |
aorta tunica adventitia | 5.56e-26 | 4 |
aorta wall | 5.56e-26 | 4 |
hair follicle | 5.15e-21 | 5 |
hair follicle placode | 5.15e-21 | 5 |
blood vessel layer | 1.65e-15 | 7 |
dermis | 2.45e-12 | 9 |
dermatome | 2.45e-12 | 9 |
future dermis | 2.45e-12 | 9 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
organ component layer | 2.96e-07 | 66 |