FFCP PHASE1:Hg19::chr5:65349876..65349891,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:65349876..65349891,+ | |||
|description=CAGE_peak_at_chr5:65349876..65349891,+ | |||
|id=chr5:65349876..65349891,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.57e-08!45;CL:0002057!3.45e-08!42;CL:0002194!5.95e-08!63;CL:0000576!5.95e-08!63;CL:0000040!5.95e-08!63;CL:0000559!5.95e-08!63;CL:0002009!1.96e-07!65;CL:0002087!7.84e-07!119;CL:0000766!9.15e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-08;33!CL:0002057;2.15e-08;33!CL:0000473;3.44e-08;39!CL:0000234;3.44e-08;39!CL:0000135;3.02e-07;3!CL:0000388;3.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.92e-10,48;CL:0000234,2.92e-10,48;CL:0000766,8.41e-09,72;CL:0000860,2.03e-08,42;CL:0002057,2.03e-08,42;CL:0002194,3.03e-08,59;CL:0000576,3.03e-08,59;CL:0000040,3.03e-08,59;CL:0000559,3.03e-08,59;CL:0002009,8.01e-08,61;CL:0000135,2.24e-07,3;CL:0000388,2.24e-07,3;CL:0000839,6.92e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.02e-07;3!UBERON:0000043;3.02e-07;3!UBERON:0007845;3.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.24e-07,3;UBERON:0000043,2.24e-07,3;UBERON:0007845,2.24e-07,3;UBERON:0003528,5.59e-07,34;UBERON:0002020,5.59e-07,34 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,1.77936752594749,0.502170558379211,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0.369754010166788,0.0774672005803016,0.568676929949686,0,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.872389432677388,0.755751887377619,0,1.16214518452842,0.822335776043652,1.85823822537062,0.575384784644301,0,1.41889337933151,1.37898272294647,0.645484683583826,0,2.25890807451126,1.36453075028923,0.674170453335254,1.53041946185451,1.28371610830437,3.83602275479425,0.659702600373432,0.797854630486527,0.426224750532694,6.09439401120026,1.13477044938228,0,0.75374599577023,2.08593167368081,0.65156653411535,1.21079900526674,2.20966581592539,0.949387162322653,1.05627643155971,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,1.14005097496499,0.79566670879636,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,1.91136614062614,0,0,0.263384084775077,0.983548850569165,0.786021525498329,1.02800749499755,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.443067789167242,1.35401931882508,0.512365278902701,0.390178042679635,1.64437904603676,0,0.289803085735052,1.03800594213442,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.403213486449465,1.60464117470104,0.289648807765598,0,0.670700859703636,0.12786256184353,0,2.00535164254356,2.02785126545153,0,0,0.756278537312543,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0.993943903390637,0.25326102332916,0,0.286836620748814,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.597794722207204,0,0.161872944368132,0.561803226808994,0,0.491337269247072,0.206651562351531,0,1.23633464639278,0,0,0,1.00094815897571,0,0,0.612975591598039,0.300476117813194,0.340296549480063,0.538168907066586,0.213557388818567,1.69545520927649,0,0.309157587715317,0.515281080091258,0.744467425326359,0.337552664482532,0.194874010322397,1.26216887122057,0.736399189138395,0.161646056818812,0,0.302256294682921,0.508681776931463,0.193260853163297,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0.207322110030741,0,0,0,1.92972281457866,0,1.85747171212792,0.721879481669586,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.491953754172454,0.343135620597051,0.219500570817251,0,0.402115889646523,0.462942225792648,0,0,0,0.579652024875384,0.234817388471643,0,0,0.380508304469197,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.503946384596579,0.141775097242386,0.626909658919938,0.581267877027924,0,0,0.616339038092582,0,0,0,0.380987365753014,0,0,0,0.308482478109971,0.901029173531752,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0.542621605391443,0,0,0,0.791951872933429,0.301439377059586,0,0.499864955910285,1.2162378064119,1.00451418286425,8.43335757932127,0.239624855491583,2.29723871668228,0,0.434343920002738,0.410952645100767,0.179060963239896,0.224170287987055,0.394061520403854,1.94064817373566,1.15508732651774,0,0,0.773288812777695,0.167516265334349,1.27587750330633,6.74106321552464,8.97484377612075,0.414415513436035,0.12269149171914,0,0.542530047399471,0.415941723061614,1.60586089917446,0.788512075169673,0.702848489956279,0,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0.343143423810856,0.206768026122887,1.72571360654893,0.853820462427555,0,1.66435439510497,0.30239029332968,0,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0.321707842287215,0,0.462629081407967,0,0.246381468041427,0,0.232420756919918,0.120859449591622,1.00253235151642,1.10497186723076,0.114814448164607,1.0925470080403,1.18011973463482,0.451199612907412,0.462092022626489,0,0,0.422206515571503,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0.256450125116389,0,0.325378394664303,0.412164046590889,0.27470839445503,0.330037999682352,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.426133137080504,0.267096106940212,0.661139661443912,0.192190067365106,0.382838137483752,0.50578890427775,3.253918845081,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.38126038784765,0,1.28381696410176,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.409499734223957,1.1312434556297,0,0,1.32687795048244,0,0,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0.196498082026242,0,0,0.211107635297664,1.64647446479951,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,1.01489521846434,0.764637207142375,0,0.476463550915578,0,0.648473311192717,1.08006287447623,2.37937552888281,0.534120355637366,0,0.245040215981032,0.557409525377156,0.144269212976445,0.497992903438899,0.956557636372934,0.399158742865633,0,0,0.324621940274555,0,0,0.313359791546046,0,0,0.1605880751037,0.605399121573143,0,0,0.614481528616916,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0.852408440419239,0.71623345421307,0.890894042497916,0.307160702099232,0,1.68803299692615,0.222617410045812,0.494411622680279,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.369254416383208,0.311039587661807,0.718946809178615,0.716084698702437,0.511572370226872,0.493217028184668,0,0,0,0.371072392647405,0,0,0.174919999992391,0,0.227586896570999,0,0,0.344743373241465,0.583209226766509,0.520874984799877,0.885741385813839,0.844175070377856,1.52581736317083,0.663475559587348,0.591095237907095,0.219385397153973,0,0.139423744278603,0.153900517007594,0.569710279235006,0,0.359030577639089,0.651884231532048,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0.335643173951685,0,0.158936578980379,2.74297483886435,0.652931232636591,0,0.432777279484182,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0.404406797884062,0.802577647298789,0.468528891450678,0.547364367646998,0,0.242780379534093,0.789168805698781,0,0.61214552326098,0.063186579628488,0.60129367765797,0,0,0,0,0,0,1.24807205711825,0.173559738335131,0.0979923974143777,0,0,0.51595809741485,0.483781656445426,0.365446585430928,0.328461828212837,0.0969890164884194,0,0.451961481561065,0.274083849293502,0.19871461170299,0.696418755514666,0.391102765469606,0.480952921509202,0.426905989478705,2.79733453414982,0.864542502924636,0.229073192331831,0.686379991447858,0.432164393964449,0.372757606696298,0.471388069233591,0.135904206073614,0.523014231561666,0.815985741090574,0,1.20084057741958,2.60120219894787,0,0.429765441419957,1.31443677139657,0.279282401272254,0.916641696046735,0,0.399358000997982,0,0,0.201550417460179,0.360299883542404,0,0,0.164831716762333,0.0674035438541849,0.492137407573744,0.0846733320657845,1.59045937961861,1.36203406111576,0.482259445395058,0.412618309791701,0.83088067605837,0.2249738915515,0,0,0.335434687599266,0.394028536495991,0,0.105600336519406,0,0.383830394638891,0,0,0,0,2.5926644736038,0.326587360109409,0,0.082092520749339,1.02232813071253,0.679872549120754,0.439656701034247,0,0.517131825446202,1.58679122091228,0.342173675768659,0,0.106787412567695,0,0.828478110694391,0.496166021811951,0.790446527591777,0.243585196761792,0,0,0,0,0,0,0,4.88105059607853,1.1267183763585,0,0.665574309221114,0.248385611765534,0.553394539744923,0.499921631848426,0.454947352624943,0.285465333544967,0.705797459094515,1.40500471742064,0.28984205722165,0.597019211547496,0.701139929541673,0,0.568209015825267,0.50313580350515,0.889811221596536,0.686520205190771,0.302461847526478,0.15543720058278,0.295710299979268,0.159296767163702,0.449803112163605,0.310525913752519,0,0.53168342911599,0.521745061811734,0,1.14241563650639,0.406870733204662,0.545545977607678,0,0.464033759878494,1.59238355479446,2.00013882331577,0,0,0,0.770479321629213,0.643324774124777,0.260994291965212,1.81364740409818,0.926089897295336,3.67105056759701,0.537266523244462,0,0.657852148736121,0.706756583783524,0.192914038270915,0,1.02496607435179,0.690860683462397,0.911579868532147,1.24432592536558,0.389720617678777,0.265729680626726,0,6.22458712808184,0.245772908753719,0.211312123358627,0.79994958341972,0.213383459388282,0,0,0.368211900503681,0,0.622077260032973,0.127894371303652,0,0.157265941855896,0.327628914576042,0.33946505990805,0.637724760305049,0.123935764259002,0,0.318004350653419,0.157723490002507,0,1.41070377476274,0.3062454773532,0.128458450192919,0,1.91560630868582,0,0.504143392443436,0.138314504928436,0.968853873791107,5.71077681036618,0,0,0.183428598521679,0.808679663052368,1.52552838186867,0.690359926060101,0,0.376051641746286,0.40341013740704,0,0,0.49131575253029,0.443568258651136,0.135075169236789,0.781078098613847,1.2401207790071,0.19024743058172,0,0,1.48863353516788,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.460935950223117,0.342976018874837,0.747667062745149,0.0657727735628491,1.89110145414349,0.333694205676207,0.313972371402056,0.785577949580009,0,0,1.07963795609311,0.9555033757741,0.214429632529969,0,0,0,0,0.414432328326074,0.85359238546975,0,0.430227358820278,0.709992004383392,0.426067023795788,0,1.3746412112643,0.31020638566432,0.955538938977433,1.11855431797792,0,0.365753774946808,0.647428837187895,0,0,0.485710993059139,0,0.397901550322736,0.475680363110274,0.11294608203896,0,0.150962843566674,0.231522474323834,1.96703604453562,0.940634592723046,0,0.235676547101626,0.785233868459781,0.297046400327086,0.4226557275834,0.339854229375634,0.281951753939561,0.0644578879735772,0.199882311849858,0.178553938605658,0.352894871715692,0.481448200135009,0,0,2.15009374727177,0,0.0679914901909147,0,1.0580536810308,1.48798007266701,2.31087814315709,2.59575937274273,0,0.546327859818478,0.126698501011437,0,0,0.275684698604535,0,0.303114792872958,0.267964130156178,1.65833887891756,2.58582489654738,0,0,0.322944549180031,0.124149428591716,0.224263725161227,0.25458863311266,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.286888821570705,0.665320713092027,0.407016343054873,1.28072815053259,0,0.179650404213174,0,0,0.406896178315738,0,0,0.961705476909699 | |||
|short_description=p@chr5:65349876..65349891,+ | |||
}} |
Latest revision as of 15:47, 30 July 2015
Short description: | p@chr5:65349876..65349891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:65349876..65349891, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.92e-10 | 48 |
phagocyte | 2.92e-10 | 48 |
myeloid leukocyte | 8.41e-09 | 72 |
classical monocyte | 2.03e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-08 | 42 |
monopoietic cell | 3.03e-08 | 59 |
monocyte | 3.03e-08 | 59 |
monoblast | 3.03e-08 | 59 |
promonocyte | 3.03e-08 | 59 |
macrophage dendritic cell progenitor | 8.01e-08 | 61 |
fibrocyte | 2.24e-07 | 3 |
tendon cell | 2.24e-07 | 3 |
myeloid lineage restricted progenitor cell | 6.92e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.24e-07 | 3 |
tendon | 2.24e-07 | 3 |
regular connective tissue | 2.24e-07 | 3 |
brain grey matter | 5.59e-07 | 34 |
gray matter | 5.59e-07 | 34 |