FFCP PHASE1:Hg19::chr5:6582243..6582256,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000505626,ENST00000507628_5end | |||
|cluster_id=chr5:6582243..6582256,+ | |||
|description=CAGE_peak_1_at_ENST00000505626_5end,CAGE_peak_1_at_ENST00000507628_5end | |||
|id=chr5:6582243..6582256,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.32e-14!12;CL:0002579!1.11e-09!3;CL:0002580!1.56e-09!3;CL:0002615!2.12e-09!3;CL:0000136!1.86e-08!15;CL:0002617!5.46e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.08e-27;12!CL:0002579;7.58e-19;3!CL:0002615;1.62e-18;3!CL:0002580;1.62e-18;3!CL:0002581;6.65e-15;1!CL:0000136;1.01e-09;13!CL:0002097;6.57e-08;2!CL:0002617;6.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.08e-27,12;CL:0002579,7.26e-19,3;CL:0002580,1.77e-18,3;CL:0002615,1.94e-18,3;CL:0002581,6.22e-15,1;CL:0000136,1.56e-08,15;CL:0002617,4.69e-08,2;CL:0002097,5.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.12e-34!22;UBERON:0001950!1.21e-33!20;UBERON:0000956!1.64e-29!25;UBERON:0000203!1.64e-29!25;UBERON:0001869!3.94e-28!32;UBERON:0001893!3.35e-26!34;UBERON:0002791!3.87e-24!33;UBERON:0002020!2.68e-23!34;UBERON:0003528!2.68e-23!34;UBERON:0002780!6.61e-21!41;UBERON:0001890!6.61e-21!41;UBERON:0006240!6.61e-21!41;UBERON:0003080!2.72e-20!42;UBERON:0003688!2.25e-17!6;UBERON:0002358!2.25e-17!6;UBERON:0003684!2.25e-17!6;UBERON:0001178!2.25e-17!6;UBERON:0000955!3.35e-17!69;UBERON:0006238!3.35e-17!69;UBERON:0001049!1.06e-16!57;UBERON:0005068!1.06e-16!57;UBERON:0006241!1.06e-16!57;UBERON:0007135!1.06e-16!57;UBERON:0000200!1.27e-16!6;UBERON:0005743!1.48e-16!86;UBERON:0001017!3.77e-16!82;UBERON:0002616!5.98e-16!59;UBERON:0003056!1.65e-15!61;UBERON:0000073!2.48e-14!94;UBERON:0001016!2.48e-14!94;UBERON:0002346!2.51e-14!90;UBERON:0001872!4.23e-14!5;UBERON:0003075!4.92e-14!86;UBERON:0007284!4.92e-14!86;UBERON:0007023!8.87e-12!115;UBERON:0000153!1.27e-09!129;UBERON:0007811!1.27e-09!129;UBERON:0000033!1.42e-09!123;UBERON:0002021!6.39e-09!5;UBERON:0002771!9.75e-09!3;UBERON:0004457!2.92e-08!12;UBERON:0000042!2.92e-08!12;UBERON:0001871!4.33e-08!7;UBERON:0000310!3.51e-07!10;UBERON:0005406!5.01e-07!2;UBERON:0001870!9.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.43e-35;6!UBERON:0002358;1.43e-35;6!UBERON:0003684;1.43e-35;6!UBERON:0001178;1.43e-35;6!UBERON:0004457;7.30e-24;9!UBERON:0000042;7.30e-24;9!UBERON:0002581;1.61e-14;1!UBERON:0007190;1.61e-14;1!UBERON:0000310;1.82e-12;10!UBERON:0001872;1.66e-11;5!UBERON:0001443;2.18e-11;11!UBERON:0000200;9.67e-10;6!UBERON:0005406;4.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.64e-35,6;UBERON:0002358,1.64e-35,6;UBERON:0003684,1.64e-35,6;UBERON:0001178,1.64e-35,6;UBERON:0004457,5.80e-18,12;UBERON:0000042,5.80e-18,12;UBERON:0007190,2.11e-14,1;UBERON:0002581,2.75e-14,1;UBERON:0000310,1.55e-12,10;UBERON:0001443,1.89e-11,11;UBERON:0001872,2.41e-11,5;UBERON:0000200,1.26e-09,6;UBERON:0005406,4.09e-08,2;UBERON:0002323,3.46e-07,46;UBERON:0009569,8.51e-07,112;UBERON:0004458,9.66e-07,49 | |||
|phase1_expression=1.99846217197612,0.856402095563933,1.83240725324762,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.389748020644795,0,0,0.969876340912871,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,0.61384789315225,1.40330047216537,3.20347873139252,1.53512174720011,0.64341568457443,2.96836132889982,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.668245123238271,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.706521476061055,0,0.319267718114302,0.41023272848151,2.01657356977374,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,1.95546853708069,0,0,0,0,0,1.14813893851271,0.781078098613847,0.206686796501184,0.634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.05236437700559,0,0,0,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0.436350690340377,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000505626,p1@ENST00000507628 | |||
}} |
Latest revision as of 15:49, 30 July 2015
Short description: | p1@ENST00000505626, p1@ENST00000507628 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000505626_5end, CAGE_peak_1_at_ENST00000507628_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505626, ENST00000507628_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.08e-27 | 12 |
omentum preadipocyte | 7.26e-19 | 3 |
preadipocyte of the breast | 1.77e-18 | 3 |
adipocyte of omentum tissue | 1.94e-18 | 3 |
perirenal preadipocyte | 6.22e-15 | 1 |
fat cell | 1.56e-08 | 15 |
adipocyte of breast | 4.69e-08 | 2 |
cortical cell of adrenal gland | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.64e-35 | 6 |
peritoneum | 1.64e-35 | 6 |
abdominal cavity | 1.64e-35 | 6 |
visceral peritoneum | 1.64e-35 | 6 |
cavity lining | 5.80e-18 | 12 |
serous membrane | 5.80e-18 | 12 |
paracentral gyrus | 2.11e-14 | 1 |
postcentral gyrus | 2.75e-14 | 1 |
breast | 1.55e-12 | 10 |
chest | 1.89e-11 | 11 |
parietal lobe | 2.41e-11 | 5 |
gyrus | 1.26e-09 | 6 |
perirenal fat | 4.09e-08 | 2 |
body cavity | 3.46e-07 | 46 |
subdivision of trunk | 8.51e-07 | 112 |
body cavity or lining | 9.66e-07 | 49 |