FFCP PHASE1:Hg19::chr5:66245273..66245278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:66245273..66245278,+ | |||
|description=CAGE_peak_at_chr5:66245273..66245278,+ | |description=CAGE_peak_at_chr5:66245273..66245278,+ | ||
|id=chr5:66245273..66245278,+ | |id=chr5:66245273..66245278,+ | ||
|ontology_enrichment_celltype=CL:0000313!1.41e-08!1;CL:1001319!3.83e-08!1;CL:1000600!3.83e-08!1;CL:0000066!4.93e-07!254 | |ontology_enrichment_celltype=CL:0000313!1.41e-08!1;CL:1001319!3.83e-08!1;CL:1000600!3.83e-08!1;CL:0000066!4.93e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000313;4.10e-23;1!CL:0000159;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.28e-23,1;CL:0000159,2.59e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.12e-12!106;DOID:0050687!2.54e-09!143;DOID:0050619!1.22e-08!1;DOID:1357!1.22e-08!1;DOID:2152!1.41e-08!1;DOID:3151!1.63e-08!1;DOID:3149!1.63e-08!1;DOID:299!5.06e-07!25;DOID:162!5.57e-07!235;DOID:14566!9.27e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.10e-23;1!DOID:1357;2.10e-23;1!DOID:3151;4.10e-23;1!DOID:2152;4.10e-23;1!DOID:3149;4.10e-23;1!DOID:299;1.58e-14;25!DOID:3493;1.65e-12;2!DOID:3451;2.90e-12;2!DOID:4159;2.90e-12;2!DOID:0060122;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.10e-23,1;DOID:1357,2.10e-23,1;DOID:2152,3.28e-23,1;DOID:3151,5.13e-23,1;DOID:3149,5.13e-23,1;DOID:299,1.53e-14,25;DOID:3493,1.65e-12,2;DOID:3451,3.24e-12,2;DOID:4159,3.24e-12,2;DOID:0060122,3.24e-12,2;DOID:305,1.67e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001042!5.05e-11!10;UBERON:0009145!5.05e-11!10;UBERON:0006562!4.91e-10!11;UBERON:0000344!1.93e-09!12;UBERON:0001557!1.01e-08!19;UBERON:0001764!1.22e-08!1;UBERON:0001825!1.22e-08!1;UBERON:0004911!1.41e-08!1;UBERON:0004645!3.83e-08!1;UBERON:0001256!3.83e-08!1;UBERON:0001259!3.83e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0002370!1.05e-07!4;UBERON:0005058!1.05e-07!4;UBERON:0009113!1.05e-07!4;UBERON:0003295!1.05e-07!4;UBERON:0005562!1.05e-07!4;UBERON:0000974!8.37e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.10e-23;1!UBERON:0001825;2.10e-23;1!UBERON:0004911;4.10e-23;1!UBERON:0004909;2.90e-12;2!UBERON:0003343;6.50e-07;4!UBERON:0004785;6.50e-07;4!UBERON:0002394;8.14e-07;4!UBERON:0003928;8.14e-07;4!UBERON:0000014;9.11e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.10e-23,1;UBERON:0001825,2.10e-23,1;UBERON:0004911,3.28e-23,1;UBERON:0004909,2.59e-12,2;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4;UBERON:0000014,9.63e-07,4 | |||
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|short_description=p@chr5:66245273..66245278,+ | |short_description=p@chr5:66245273..66245278,+ | ||
}} | }} |
Latest revision as of 15:49, 30 July 2015
Short description: | p@chr5:66245273..66245278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:66245273..66245278, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.28e-23 | 1 |
seromucus secreting cell | 2.59e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.10e-23 | 1 |
paranasal sinus | 2.10e-23 | 1 |
epithelium of female gonad | 3.28e-23 | 1 |
epithelium of gonad | 2.59e-12 | 2 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.10e-23 | 1 |
maxillary sinus cancer | 2.10e-23 | 1 |
ovary epithelial cancer | 3.28e-23 | 1 |
skin squamous cell carcinoma | 5.13e-23 | 1 |
keratoacanthoma | 5.13e-23 | 1 |
adenocarcinoma | 1.53e-14 | 25 |
signet ring cell adenocarcinoma | 1.65e-12 | 2 |
skin carcinoma | 3.24e-12 | 2 |
skin cancer | 3.24e-12 | 2 |
integumentary system cancer | 3.24e-12 | 2 |
carcinoma | 1.67e-07 | 106 |