FFCP PHASE1:Hg19::chr6:125589278..125589288,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:125589278..125589288,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr6:125589278..125589288,+ | |description=CAGE_peak_at_chr6:125589278..125589288,+ | ||
|id=chr6:125589278..125589288,+ | |id=chr6:125589278..125589288,+ | ||
|ontology_enrichment_celltype=CL:0002586!7.37e-31!3;CL:0000149!2.53e-23!4;CL:0000159!9.15e-22!2;CL:0000064!7.51e-14!3;CL:0005012!7.51e-14!3;CL:0000067!7.51e-14!3;CL:0002304!7.51e-14!3;CL:0000319!8.62e-12!1;CL:0000313!9.57e-12!1;CL:0002149!1.06e-07!6;CL:0002255!1.06e-07!6;CL:0000147!4.72e-07!14 | |ontology_enrichment_celltype=CL:0002586!7.37e-31!3;CL:0000149!2.53e-23!4;CL:0000159!9.15e-22!2;CL:0000064!7.51e-14!3;CL:0005012!7.51e-14!3;CL:0000067!7.51e-14!3;CL:0002304!7.51e-14!3;CL:0000319!8.62e-12!1;CL:0000313!9.57e-12!1;CL:0002149!1.06e-07!6;CL:0002255!1.06e-07!6;CL:0000147!4.72e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000159;4.61e-131;2!CL:0000319;1.23e-66;1!CL:0000313;2.39e-66;1!CL:0000151;2.43e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,4.61e-131,2;CL:0000319,1.23e-66,1;CL:0000313,2.39e-66,1;CL:0000151,1.78e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:3030!8.62e-12!1;DOID:2152!9.57e-12!1;DOID:299!3.52e-10!25;DOID:3001!1.06e-07!6 | |ontology_enrichment_disease=DOID:3030!8.62e-12!1;DOID:2152!9.57e-12!1;DOID:299!3.52e-10!25;DOID:3001!1.06e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3030;1.23e-66;1!DOID:2152;2.39e-66;1!DOID:4468;7.05e-34;2!DOID:299;1.10e-24;25!DOID:120;6.90e-11;27!DOID:193;3.24e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.23e-66,1;DOID:2152,2.39e-66,1;DOID:4468,7.05e-34,2;DOID:299,1.10e-24,25;DOID:120,6.90e-11,27;DOID:193,3.24e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.78e-32!11;UBERON:0001781!7.37e-31!3;UBERON:0001782!7.37e-31!3;UBERON:0005424!7.37e-31!3;UBERON:0000966!8.59e-19!5;UBERON:0005388!8.59e-19!5;UBERON:0001802!8.59e-19!5;UBERON:0000019!2.40e-18!19;UBERON:0000047!2.40e-18!19;UBERON:0004088!2.40e-18!19;UBERON:0003072!2.40e-18!19;UBERON:0003071!2.40e-18!19;UBERON:0004128!2.40e-18!19;UBERON:0000970!2.06e-17!20;UBERON:0002104!1.44e-16!21;UBERON:0001456!1.44e-16!21;UBERON:0005085!4.64e-16!29;UBERON:0000020!4.27e-15!23;UBERON:0001032!1.88e-14!24;UBERON:0004456!1.88e-14!24;UBERON:0001778!7.51e-14!3;UBERON:0001775!7.51e-14!3;UBERON:0004911!9.57e-12!1;UBERON:0000488!1.27e-10!4;UBERON:0002203!2.26e-07!6;UBERON:0001768!2.26e-07!6;UBERON:0003056!4.20e-07!61;UBERON:0001444!5.10e-07!48;UBERON:0001801!8.57e-07!14 | |ontology_enrichment_uberon=UBERON:0007625!6.78e-32!11;UBERON:0001781!7.37e-31!3;UBERON:0001782!7.37e-31!3;UBERON:0005424!7.37e-31!3;UBERON:0000966!8.59e-19!5;UBERON:0005388!8.59e-19!5;UBERON:0001802!8.59e-19!5;UBERON:0000019!2.40e-18!19;UBERON:0000047!2.40e-18!19;UBERON:0004088!2.40e-18!19;UBERON:0003072!2.40e-18!19;UBERON:0003071!2.40e-18!19;UBERON:0004128!2.40e-18!19;UBERON:0000970!2.06e-17!20;UBERON:0002104!1.44e-16!21;UBERON:0001456!1.44e-16!21;UBERON:0005085!4.64e-16!29;UBERON:0000020!4.27e-15!23;UBERON:0001032!1.88e-14!24;UBERON:0004456!1.88e-14!24;UBERON:0001778!7.51e-14!3;UBERON:0001775!7.51e-14!3;UBERON:0004911!9.57e-12!1;UBERON:0000488!1.27e-10!4;UBERON:0002203!2.26e-07!6;UBERON:0001768!2.26e-07!6;UBERON:0003056!4.20e-07!61;UBERON:0001444!5.10e-07!48;UBERON:0001801!8.57e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.39e-66;1!UBERON:0004909;5.04e-34;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.39e-66,1;UBERON:0004909,5.04e-34,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08082020397869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3055538026711,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,6.93503677146312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08082020397869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3055538026711,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,6.93503677146312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:125589278..125589288,+ | |short_description=p@chr6:125589278..125589288,+ | ||
}} | }} |
Latest revision as of 19:07, 30 July 2015
Short description: | p@chr6:125589278..125589288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:125589278..125589288, + |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 4.61e-131 | 2 |
mucus secreting cell | 1.23e-66 | 1 |
serous secreting cell | 2.39e-66 | 1 |
secretory cell | 1.78e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.39e-66 | 1 |
epithelium of gonad | 5.04e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.23e-66 | 1 |
ovary epithelial cancer | 2.39e-66 | 1 |
clear cell adenocarcinoma | 7.05e-34 | 2 |
adenocarcinoma | 1.10e-24 | 25 |
female reproductive organ cancer | 6.90e-11 | 27 |
reproductive organ cancer | 3.24e-10 | 29 |