FFCP PHASE1:Hg19::chr6:139693814..139693833,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:139693814..139693833,-
|short_description=p@chr6:139693814..139693833,-
|description=CAGE_peak_at_chr6:139693814..139693833,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:139693814..139693833,- | |||
|coexpression_cluster_id=C715 | |||
|description=CAGE_peak_at_chr6:139693814..139693833,- | |||
|id=chr6:139693814..139693833,- | |||
|ontology_enrichment_celltype=CL:0002620!1.96e-08!23;CL:0002320!5.27e-08!365;CL:0000057!7.18e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.92e-13;23!CL:0002559;9.59e-08;5!CL:0000135;3.24e-07;3!CL:0000388;3.24e-07;3!CL:0002579;4.47e-07;3!CL:0000197;6.30e-07;6!CL:0000098;6.30e-07;6!CL:0002167;6.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.32e-13,23;CL:0000057,5.99e-09,76;CL:0002559,6.48e-08,5;CL:0000135,2.93e-07,3;CL:0000388,2.93e-07,3;CL:0000197,6.17e-07,6;CL:0000098,6.17e-07,6;CL:0002167,6.17e-07,6;CL:0002579,9.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.84e-11;5!DOID:450;7.84e-11;5!DOID:66;7.84e-11;5!DOID:423;7.84e-11;5!DOID:0080000;7.84e-11;5!DOID:11722;7.84e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.62e-11,5;DOID:450,5.62e-11,5;DOID:66,5.62e-11,5;DOID:423,5.62e-11,5;DOID:0080000,5.62e-11,5;DOID:11722,5.62e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.98e-08!375;UBERON:0002097!3.73e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.65e-09;41!UBERON:0002346;3.69e-09;4!UBERON:0000923;3.69e-09;4!UBERON:0010316;3.69e-09;4!UBERON:0005291;3.69e-09;4!UBERON:0002073;9.59e-08;5!UBERON:0002050;2.61e-07;5!UBERON:0005423;2.61e-07;5!UBERON:0007846;3.24e-07;3!UBERON:0000043;3.24e-07;3!UBERON:0007845;3.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.63e-11,41;UBERON:0002199,8.86e-10,46;UBERON:0002416,8.86e-10,46;UBERON:0002073,6.48e-08,5;UBERON:0005086,6.48e-08,5;UBERON:0007846,2.93e-07,3;UBERON:0000043,2.93e-07,3;UBERON:0007845,2.93e-07,3 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,0,0.495065411840187,1.32558950291166,0,0,0,0.487932798790507,0,0.816002764977012,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0,0.309706370895104,1.1507695692886,0,0,1.72372840368309,0,0,0.188242339542605,0.272906150057846,0.674170453335254,1.53041946185451,1.60464513538047,0.639337125799041,0,0,0.426224750532694,1.7412554317715,0,0,1.00499466102697,0,1.95469960234605,0,0,0.632924774881769,0,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,1.17903228824749,0.205601498999509,0,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0,0.270803863765016,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,2.43806866313962,1.34140171940727,0,0.361439152384566,0.50133791063589,1.30361867064741,0,0.973269740605272,0.189069634328136,0.221729397462564,0,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.860509862246441,0,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0.576175924479999,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.741800787835671,0,2.87447256726495,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,2.33206526395521,2.34913127700424,1.90738711043606,1.50045548042201,1.23663035086127,3.86460810068444,2.41951913231067,0.843881661206331,0.487185025805993,4.29137416214995,2.20919756741518,0.323292113637624,1.42003837006646,1.10827308050404,1.52604533079439,0.193260853163297,0.272746120590835,0,0,0,0.232387885739037,0,0.504641701751257,0,1.56449532329816,2.57296375277154,0,3.25057549622385,2.88751792667834,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0,0,0,0.38474715694639,0,1.40241773803446,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,1.32969058292435,2.08014873822732,0.257207374262142,0,0.532844358032199,0.428933980974443,1.62786481617433,0,0.65147236858747,0.355391948742546,0,0,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,1.14861935834114,2.85273810081437,0.434343920002738,1.02738161275192,0.358121926479791,0.112085143993527,0,0.862510299438069,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0.36807447515742,1.00034104211935,0.813795071099207,2.49565033836969,7.49401752948079,3.46945313074656,3.39710103478868,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.695068915744663,0.587403472388222,0.686286847621712,0,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0.744323423456331,0.61384789315225,0.841980283299221,1.02511319404561,2.04682899626681,1.44768529029247,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0,0.229628896329213,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0.541892875087706,0,0,0,0.447749509444357,0,0.522870902049801,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0.308097234229289,0.460511024178389,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,1.85938219718914,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0,0,0.899362287916574,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,1.75380354101505,0.578775534266688,0.655894752046633,0,0,0,0,0.196498082026242,0,0.354761064070598,0.633322905892992,3.29294892959902,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0.427296284509893,0,0.490080431962063,0.185803175125719,0,0,0,0,0,0,0.649243880549111,0.561594356226918,0,0.47003968731907,0,0.169291777801603,0.1605880751037,1.21079824314629,0.425846237690326,1.37402137902306,0.614481528616916,0.671028323677248,0.333698283423817,0.19538809540204,0,0,0.540911356951966,0.66614393599564,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0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| ||
|short_description=p@chr6:139693814..139693833,- | |||
}} | }} |
Latest revision as of 20:14, 30 July 2015
Short description: | p@chr6:139693814..139693833, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:139693814..139693833, - |
Coexpression cluster: | C715_liposarcoma_Fibroblast_Mesenchymal_Olfactory_Hair_Mast_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.32e-13 | 23 |
fibroblast | 5.99e-09 | 76 |
hair follicle cell | 6.48e-08 | 5 |
fibrocyte | 2.93e-07 | 3 |
tendon cell | 2.93e-07 | 3 |
receptor cell | 6.17e-07 | 6 |
sensory epithelial cell | 6.17e-07 | 6 |
olfactory epithelial cell | 6.17e-07 | 6 |
omentum preadipocyte | 9.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.63e-11 | 41 |
integument | 8.86e-10 | 46 |
integumental system | 8.86e-10 | 46 |
hair follicle | 6.48e-08 | 5 |
hair follicle placode | 6.48e-08 | 5 |
dense regular connective tissue | 2.93e-07 | 3 |
tendon | 2.93e-07 | 3 |
regular connective tissue | 2.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.62e-11 | 5 |
myotonic disease | 5.62e-11 | 5 |
muscle tissue disease | 5.62e-11 | 5 |
myopathy | 5.62e-11 | 5 |
muscular disease | 5.62e-11 | 5 |
myotonic dystrophy | 5.62e-11 | 5 |