FFCP PHASE1:Hg19::chr6:152635032..152635056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:152635032..152635056,- | |||
|coexpression_cluster_id=C1894 | |coexpression_cluster_id=C1894 | ||
|description=CAGE_peak_at_chr6:152635032..152635056,- | |description=CAGE_peak_at_chr6:152635032..152635056,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!8.00e-11!19;CL:0000039!1.07e-08!7;CL:0000586!1.07e-08!7;CL:1000306!7.04e-08!4;CL:0002547!7.04e-08!4 | |ontology_enrichment_celltype=CL:0000077!8.00e-11!19;CL:0000039!1.07e-08!7;CL:0000586!1.07e-08!7;CL:1000306!7.04e-08!4;CL:0002547!7.04e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.54e-25;19!CL:0002563;4.02e-11;4 | |ontology_enrichment_celltype_v019=CL:0000077;1.54e-25;19!CL:0002563;4.02e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.46e-25,19;CL:0002563,4.45e-11,4;CL:0000213,6.52e-08,58;CL:0000215,6.52e-08,58;CL:0000076,3.17e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.50e-08!14 | |ontology_enrichment_disease=DOID:2394!4.50e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.97e-11;14 | |ontology_enrichment_disease_v019=DOID:2394;1.97e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000415!7.04e-08!4;UBERON:0007240!7.04e-08!4;UBERON:0005742!7.04e-08!4;UBERON:0005734!7.04e-08!4;UBERON:0004664!7.04e-08!4;UBERON:0004663!7.04e-08!4;UBERON:0002118!7.26e-07!5;UBERON:0004532!7.26e-07!5 | |ontology_enrichment_uberon=UBERON:0000415!7.04e-08!4;UBERON:0007240!7.04e-08!4;UBERON:0005742!7.04e-08!4;UBERON:0005734!7.04e-08!4;UBERON:0004664!7.04e-08!4;UBERON:0004663!7.04e-08!4;UBERON:0002118!7.26e-07!5;UBERON:0004532!7.26e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.81e-11;1!UBERON:0001242;4.02e-11;4!UBERON:0001262;4.02e-11;4!UBERON:0004786;4.02e-11;4!UBERON:0004808;4.02e-11;4!UBERON:0001277;4.02e-11;4!UBERON:0002118;8.84e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0007195;3.81e-11;1!UBERON:0001242;4.02e-11;4!UBERON:0001262;4.02e-11;4!UBERON:0004786;4.02e-11;4!UBERON:0004808;4.02e-11;4!UBERON:0001277;4.02e-11;4!UBERON:0002118;8.84e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.45e-11,4;UBERON:0001262,4.45e-11,4;UBERON:0004786,4.45e-11,4;UBERON:0004808,4.45e-11,4;UBERON:0001277,4.45e-11,4;UBERON:0007195,4.91e-11,1;UBERON:0002118,7.86e-09,5 | |||
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| ||
|short_description=p@chr6:152635032..152635056,- | |short_description=p@chr6:152635032..152635056,- | ||
}} | }} |
Latest revision as of 21:04, 30 July 2015
Short description: | p@chr6:152635032..152635056, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:152635032..152635056, - |
Coexpression cluster: | C1894_mesothelioma_Mesothelial_aorta_mesenchymal_pleomorphic_heart_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.46e-25 | 19 |
intestinal epithelial cell | 4.45e-11 | 4 |
lining cell | 6.52e-08 | 58 |
barrier cell | 6.52e-08 | 58 |
squamous epithelial cell | 3.17e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.45e-11 | 4 |
wall of intestine | 4.45e-11 | 4 |
gastrointestinal system mucosa | 4.45e-11 | 4 |
gastrointestinal system epithelium | 4.45e-11 | 4 |
intestinal epithelium | 4.45e-11 | 4 |
stroma of bone marrow | 4.91e-11 | 1 |
right ovary | 7.86e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.58e-11 | 14 |