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FFCP PHASE1:Hg19::chr6:161736275..161736279,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:161736275..161736279,-
|DHSsupport=supported 
|short_description=p@chr6:161736275..161736279,-
|DPIdataset=robust
|description=CAGE_peak_at_chr6:161736275..161736279,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr6:161736275..161736279,-
|coexpression_cluster_id=C52
|description=CAGE_peak_at_chr6:161736275..161736279,-
|id=chr6:161736275..161736279,-
|ontology_enrichment_celltype=CL:0002149!1.83e-09!6;CL:0002255!1.83e-09!6;CL:0000054!1.45e-07!2;CL:0000137!1.45e-07!2;CL:0000092!1.45e-07!2
|ontology_enrichment_celltype_v019=CL:0002149;9.87e-34;6!CL:0002255;9.87e-34;6!CL:0000499;4.06e-08;28
|ontology_enrichment_celltype_v019_2=CL:0002149,9.87e-34,6;CL:0002255,9.87e-34,6;CL:0000499,4.06e-08,28
|ontology_enrichment_development_v019=UBERON:0005795;9.44e-21;10
|ontology_enrichment_disease=DOID:0060085!7.55e-14!1;DOID:3165!7.55e-14!1;DOID:0060121!7.55e-14!1;DOID:2438!7.55e-14!1;DOID:4418!7.55e-14!1;DOID:2355!8.58e-14!1;DOID:3112!9.73e-14!1;DOID:3001!1.83e-09!6;DOID:299!2.99e-08!25;DOID:200!1.45e-07!2;DOID:4305!1.45e-07!2;DOID:74!1.54e-07!2;DOID:3493!2.40e-07!2
|ontology_enrichment_disease_v019=DOID:3001;9.87e-34;6!DOID:299;5.71e-09;25!DOID:120;2.22e-08;27!DOID:193;7.15e-08;29
|ontology_enrichment_disease_v019_2=DOID:3001,9.87e-34,6;DOID:299,5.71e-09,25;DOID:120,2.22e-08,27;DOID:193,7.15e-08,29
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0000995;1.09e-12;17!UBERON:0003975;4.81e-12;18!UBERON:0004175;1.77e-10;21!UBERON:0003134;1.21e-07;33
|ontology_enrichment_uberon_v019_2=UBERON:0000995,1.77e-10,21;UBERON:0005795,4.74e-10,22;UBERON:0003975,4.74e-10,22;UBERON:0004175,5.71e-09,25
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|short_description=p@chr6:161736275..161736279,-
}}
}}

Latest revision as of 21:50, 30 July 2015

Short description:p@chr6:161736275..161736279, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr6:161736275..161736279, -
Coexpression cluster:C52_adult_NK_chronic_cord_testis_embryonic_myeloma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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