FFCP PHASE1:Hg19::chr6:170606374..170606376,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:170606374..170606376,- | |||
|coexpression_cluster_id=C1630 | |||
|description=CAGE_peak_at_chr6:170606374..170606376,- | |description=CAGE_peak_at_chr6:170606374..170606376,- | ||
|id=chr6:170606374..170606376,- | |id=chr6:170606374..170606376,- | ||
|ontology_enrichment_celltype=CL:0000057!2.24e-16!75;CL:0002620!1.45e-14!23;CL:0000864!4.15e-11!1;CL:0000091!4.15e-11!1;CL:0002550!6.14e-11!1;CL:0000055!2.46e-09!180 | |ontology_enrichment_celltype=CL:0000057!2.24e-16!75;CL:0002620!1.45e-14!23;CL:0000864!4.15e-11!1;CL:0000091!4.15e-11!1;CL:0002550!6.14e-11!1;CL:0000055!2.46e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:1000306;7.14e-26;4!CL:0002547;7.14e-26;4!CL:0002539;2.73e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.14e-26,4;CL:0002547,7.14e-26,4;CL:0002539,2.73e-11,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3350!2.05e-20!2;DOID:3571!4.15e-11!1;DOID:6193!4.58e-11!1;DOID:17!1.43e-08!5;DOID:450!1.43e-08!5;DOID:66!1.43e-08!5;DOID:423!1.43e-08!5;DOID:0080000!1.43e-08!5;DOID:11722!1.43e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002118!2.00e-08!5;UBERON:0004532!2.00e-08!5;UBERON:0002097!3.42e-08!40;UBERON:0002199!3.13e-07!45;UBERON:0002416!3.13e-07!45 | |ontology_enrichment_uberon=UBERON:0002118!2.00e-08!5;UBERON:0004532!2.00e-08!5;UBERON:0002097!3.42e-08!40;UBERON:0002199!3.13e-07!45;UBERON:0002416!3.13e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;7.14e-26;4!UBERON:0000415;7.14e-26;4!UBERON:0007240;7.14e-26;4!UBERON:0005742;7.14e-26;4!UBERON:0005734;7.14e-26;4!UBERON:0004664;7.14e-26;4!UBERON:0004663;7.14e-26;4!UBERON:0000947;4.86e-20;21!UBERON:0010191;4.86e-20;21!UBERON:0004573;1.83e-13;33!UBERON:0004571;1.83e-13;33!UBERON:0004237;2.73e-11;10!UBERON:0004695;2.73e-11;10!UBERON:0002111;2.73e-11;10!UBERON:0004178;2.73e-11;10!UBERON:0001637;1.65e-10;42!UBERON:0003509;1.65e-10;42!UBERON:0004572;1.65e-10;42!UBERON:0001135;5.55e-08;15!UBERON:0000055;7.93e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.14e-26,4;UBERON:0007240,7.14e-26,4;UBERON:0005742,7.14e-26,4;UBERON:0005734,7.14e-26,4;UBERON:0004664,7.14e-26,4;UBERON:0004663,7.14e-26,4;UBERON:0000947,4.86e-20,21;UBERON:0010191,4.86e-20,21;UBERON:0004797,1.91e-15,7;UBERON:0004573,2.96e-13,33;UBERON:0004571,2.96e-13,33;UBERON:0004237,2.73e-11,10;UBERON:0004695,2.73e-11,10;UBERON:0002111,2.73e-11,10;UBERON:0004178,2.73e-11,10;UBERON:0001637,1.07e-10,42;UBERON:0003509,1.07e-10,42;UBERON:0004572,1.07e-10,42;UBERON:0001135,5.55e-08,15;UBERON:0007500,5.66e-08,59;UBERON:0001981,5.66e-08,59;UBERON:0004537,5.66e-08,59;UBERON:0006965,5.66e-08,59;UBERON:0000055,4.47e-07,68 | |||
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|short_description=p@chr6:170606374..170606376,- | |short_description=p@chr6:170606374..170606376,- | ||
}} | }} |
Latest revision as of 22:21, 30 July 2015
Short description: | p@chr6:170606374..170606376, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:170606374..170606376, - |
Coexpression cluster: | C1630_Smooth_Fibroblast_mesenchymal_Chondrocyte_Nucleus_Anulus_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.14e-26 | 4 |
fibroblast of the aortic adventitia | 7.14e-26 | 4 |
aortic smooth muscle cell | 2.73e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.14e-26 | 4 |
tunica adventitia of artery | 7.14e-26 | 4 |
adventitia | 7.14e-26 | 4 |
tunica adventitia of blood vessel | 7.14e-26 | 4 |
aorta tunica adventitia | 7.14e-26 | 4 |
aorta wall | 7.14e-26 | 4 |
aorta | 4.86e-20 | 21 |
aortic system | 4.86e-20 | 21 |
blood vessel layer | 1.91e-15 | 7 |
systemic artery | 2.96e-13 | 33 |
systemic arterial system | 2.96e-13 | 33 |
blood vessel smooth muscle | 2.73e-11 | 10 |
arterial system smooth muscle | 2.73e-11 | 10 |
artery smooth muscle tissue | 2.73e-11 | 10 |
aorta smooth muscle tissue | 2.73e-11 | 10 |
artery | 1.07e-10 | 42 |
arterial blood vessel | 1.07e-10 | 42 |
arterial system | 1.07e-10 | 42 |
smooth muscle tissue | 5.55e-08 | 15 |
epithelial tube open at both ends | 5.66e-08 | 59 |
blood vessel | 5.66e-08 | 59 |
blood vasculature | 5.66e-08 | 59 |
vascular cord | 5.66e-08 | 59 |
vessel | 4.47e-07 | 68 |