FFCP PHASE1:Hg19::chr6:35511396..35511405,+: Difference between revisions
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|id=chr6:35511396..35511405,+
|short_description=p@chr6:35511396..35511405,+
|description=CAGE_peak_at_chr6:35511396..35511405,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:35511396..35511405,+ | |||
|coexpression_cluster_id=C1937 | |||
|description=CAGE_peak_at_chr6:35511396..35511405,+ | |||
|id=chr6:35511396..35511405,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.29e-27!7;CL:0000586!1.29e-27!7;CL:0000540!1.13e-08!6;CL:0000031!1.13e-08!6;CL:0000404!1.13e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.24e-51;7!CL:0000586;3.24e-51;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.30e-51,7;CL:0000586,2.30e-51,7 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.97e-09;5 | |||
|ontology_enrichment_disease=DOID:3095!5.72e-09!22;DOID:2994!5.72e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.41e-17;22!DOID:2994;5.41e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.85e-17,22;DOID:2994,4.85e-17,22 | |||
|ontology_enrichment_uberon=UBERON:0002171!3.33e-13!1;UBERON:0006518!3.33e-13!1;UBERON:0008949!3.33e-13!1;UBERON:0000101!3.33e-13!1;UBERON:0002167!3.33e-13!1;UBERON:0000341!3.28e-07!2;UBERON:0000473!7.44e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.97e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5 | |||
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|short_description=p@chr6:35511396..35511405,+ | |||
}} | }} |
Latest revision as of 01:02, 31 July 2015
Short description: | p@chr6:35511396..35511405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35511396..35511405, + |
Coexpression cluster: | C1937_choriocarcinoma_thyroid_testicular_throat_Alveolar_lung_pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.30e-51 | 7 |
germ cell | 2.30e-51 | 7 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.85e-17 | 22 |
germ cell cancer | 4.85e-17 | 22 |