FFCP PHASE1:Hg19::chr6:5999177..5999208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:5999177..5999208,- | |||
|coexpression_cluster_id=C1087 | |coexpression_cluster_id=C1087 | ||
|description=CAGE_peak_at_chr6:5999177..5999208,- | |description=CAGE_peak_at_chr6:5999177..5999208,- | ||
|id=chr6:5999177..5999208,- | |id=chr6:5999177..5999208,- | ||
|ontology_enrichment_celltype=CL:0002620!1.14e-07!23 | |ontology_enrichment_celltype=CL:0002620!1.14e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002521;5.29e-13;3!CL:0002620;8.16e-08;23!CL:0000136;1.05e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.98e-13,3;CL:0002620,7.05e-08,23;CL:0000058,9.65e-07,6;CL:0000138,9.65e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.34e-08;5!DOID:450;7.34e-08;5!DOID:66;7.34e-08;5!DOID:423;7.34e-08;5!DOID:0080000;7.34e-08;5!DOID:11722;7.34e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.40e-08,5;DOID:450,5.40e-08,5;DOID:66,5.40e-08,5;DOID:423,5.40e-08,5;DOID:0080000,5.40e-08,5;DOID:11722,5.40e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.38e-15!115;UBERON:0001950!3.06e-12!20;UBERON:0002619!1.21e-10!22;UBERON:0002199!1.10e-09!45;UBERON:0002416!1.10e-09!45;UBERON:0002020!7.97e-09!34;UBERON:0003528!7.97e-09!34;UBERON:0001869!8.39e-09!32;UBERON:0000956!9.69e-09!25;UBERON:0000203!9.69e-09!25;UBERON:0001893!6.32e-08!34;UBERON:0002097!1.82e-07!40;UBERON:0001049!1.84e-07!57;UBERON:0005068!1.84e-07!57;UBERON:0006241!1.84e-07!57;UBERON:0007135!1.84e-07!57;UBERON:0001017!1.86e-07!82;UBERON:0002791!2.19e-07!33;UBERON:0005743!4.42e-07!86;UBERON:0000955!5.67e-07!69;UBERON:0006238!5.67e-07!69;UBERON:0000073!5.83e-07!94;UBERON:0001016!5.83e-07!94;UBERON:0002346!7.30e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!5.38e-15!115;UBERON:0001950!3.06e-12!20;UBERON:0002619!1.21e-10!22;UBERON:0002199!1.10e-09!45;UBERON:0002416!1.10e-09!45;UBERON:0002020!7.97e-09!34;UBERON:0003528!7.97e-09!34;UBERON:0001869!8.39e-09!32;UBERON:0000956!9.69e-09!25;UBERON:0000203!9.69e-09!25;UBERON:0001893!6.32e-08!34;UBERON:0002097!1.82e-07!40;UBERON:0001049!1.84e-07!57;UBERON:0005068!1.84e-07!57;UBERON:0006241!1.84e-07!57;UBERON:0007135!1.84e-07!57;UBERON:0001017!1.86e-07!82;UBERON:0002791!2.19e-07!33;UBERON:0005743!4.42e-07!86;UBERON:0000955!5.67e-07!69;UBERON:0006238!5.67e-07!69;UBERON:0000073!5.83e-07!94;UBERON:0001016!5.83e-07!94;UBERON:0002346!7.30e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.29e-13;3!UBERON:0002346;6.83e-10;4!UBERON:0000923;6.83e-10;4!UBERON:0010316;6.83e-10;4!UBERON:0005291;6.83e-10;4!UBERON:0002050;5.38e-08;5!UBERON:0005423;5.38e-08;5!UBERON:0002072;5.64e-08;5!UBERON:0003102;1.29e-07;50!UBERON:0001013;3.95e-07;14!UBERON:0002199;7.49e-07;46!UBERON:0002416;7.49e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.98e-13,3;UBERON:0002199,1.55e-10,46;UBERON:0002416,1.55e-10,46;UBERON:0002072,3.17e-08,5;UBERON:0001013,2.58e-07,14 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0,2.00146596706261,0,0,7.59899634504932,1.89515962028049,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.88300474649071,1.5905718941022,2.43317435151318,0,0,0,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,1.10298924103761,0.81014194788176,0.267899184852239,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0.352303495931295,0.323745888736263,0.561803226808994,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,1.92201649936711,1.27159140695737,0.600182192168805,2.98852334791473,0.257640540045629,1.8611685633159,0.168776332241266,1.07180705677318,0,3.31379635112278,0,0,2.51880245569101,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0.643240938192885,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0.577465791044295,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,1.80567659836631,2.27407504055985,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0,1.12264037773229,0,1.02341449813341,0,0,0,0.532685175939381,0.246381468041427,0,0.464841513839837,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0.649243880549111,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,2.78365540616599,0,0.111443384277478,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0.492339221844278,0,0,0,0,0.295930216910801,0,0,5.81599647657131,3.15411533750294,0,0,0,0,0,0,0,0,1.45802306691627,0.868124974666461,0,0,0,0.774054819518572,2.95547618953547,1.75508317723178,0,0,0.769502585037971,0,0,0.987334088507493,0.54323685961004,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.865554558968364,0,0.442287822516696,0.611030144933625,0,0.123563938946503,0.313265848516366,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,1.05226393590145,0.414752765588989,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.969890164884194,0,0.451961481561065,0,0,0.823040347426423,0.586654148204409,0,0,0,0,0,0.343189995723929,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.668245123238271,0,0.157611414598396,0,0,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0,1.70388021785422,0,0.293104467356165,0,0.258565912723101,0.66116300871345,0,0,0.213574825135389,0,1.24271716604159,0,0,0.121792598380896,0,0.544017803369474,0,0,0.983617892129413,0.314108192500469,1.77213635993397,3.78281421196086,0.250381861413,0.573409195690071,0.332787154610557,0.18628920882415,0.276697269872462,0,0.606596470166591,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0,1.66441758450784,0.757612021100357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,1.01839517972415,9.77844632467741,1.61116493536703,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,8.40977093387096,0,0.484100767249525,1.29180516505481,0,0,0,0,0,0,0,0.397832444232549,0.225630985047772,0,0,0,0,0,0.540300676947157,0.781078098613847,0.620060389503552,0.634158101939068,0.546974809018219,0,0.496211178389294,0.351742488719241,0,0,0,0,0,0.443511850813194,0,0,0.40781839786099,0.657727735628491,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,6.6885236304187,0.142953088353313,0,0,0,0,0,0,0,0,0.354996002191696,0.596493833314104,0.846774100381858,0,0,0,0,0,0,0,0.513314034281235,0,3.39997695141398,0,0.596852325484105,0,0,1.53916723443601,0.301925687133347,0.231522474323834,0,0,0.245148321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| ||
|short_description=p@chr6:5999177..5999208,- | |short_description=p@chr6:5999177..5999208,- | ||
}} | }} |
Latest revision as of 02:38, 31 July 2015
Short description: | p@chr6:5999177..5999208, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:5999177..5999208, - |
Coexpression cluster: | C1087_neuroectodermal_Fibroblast_renal_occipital_carcinoid_frontal_postcentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.98e-13 | 3 |
skin fibroblast | 7.05e-08 | 23 |
chondroblast | 9.65e-07 | 6 |
chondrocyte | 9.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.98e-13 | 3 |
integument | 1.55e-10 | 46 |
integumental system | 1.55e-10 | 46 |
hypodermis | 3.17e-08 | 5 |
adipose tissue | 2.58e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.40e-08 | 5 |
myotonic disease | 5.40e-08 | 5 |
muscle tissue disease | 5.40e-08 | 5 |
myopathy | 5.40e-08 | 5 |
muscular disease | 5.40e-08 | 5 |
myotonic dystrophy | 5.40e-08 | 5 |