FFCP PHASE1:Hg19::chr6:75822973..75822991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75822973..75822991,- | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_at_chr6:75822973..75822991,- | |description=CAGE_peak_at_chr6:75822973..75822991,- | ||
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|ontology_enrichment_celltype=CL:0000057!1.24e-15!75;CL:0000055!2.08e-12!180;CL:0002620!3.83e-11!23;CL:0002334!5.03e-09!12;CL:0000136!5.24e-09!15;CL:0000499!5.04e-07!27 | |ontology_enrichment_celltype=CL:0000057!1.24e-15!75;CL:0000055!2.08e-12!180;CL:0002620!3.83e-11!23;CL:0002334!5.03e-09!12;CL:0000136!5.24e-09!15;CL:0000499!5.04e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.22e-27;12!CL:0002580;1.64e-21;3!CL:0002579;5.07e-21;3!CL:0000136;9.58e-19;13!CL:0002617;4.25e-15;2!CL:0002620;1.51e-13;23!CL:0000153;9.25e-12;9!CL:0000447;9.25e-12;9!CL:0000138;2.54e-10;6!CL:0002615;2.59e-10;3!CL:0002616;3.11e-08;1!CL:0002581;7.85e-08;1!CL:0000327;4.13e-07;15 | |ontology_enrichment_celltype_v019=CL:0002334;5.22e-27;12!CL:0002580;1.64e-21;3!CL:0002579;5.07e-21;3!CL:0000136;9.58e-19;13!CL:0002617;4.25e-15;2!CL:0002620;1.51e-13;23!CL:0000153;9.25e-12;9!CL:0000447;9.25e-12;9!CL:0000138;2.54e-10;6!CL:0002615;2.59e-10;3!CL:0002616;3.11e-08;1!CL:0002581;7.85e-08;1!CL:0000327;4.13e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.14e-27,12;CL:0002580,1.12e-21,3;CL:0000136,1.62e-21,15;CL:0002579,3.61e-21,3;CL:0000057,4.87e-17,76;CL:0002617,4.89e-15,2;CL:0002620,1.65e-13,23;CL:0000153,1.10e-11,9;CL:0000447,1.10e-11,9;CL:0000058,2.67e-10,6;CL:0000138,2.67e-10,6;CL:0002615,2.78e-10,3;CL:0000134,5.83e-09,354;CL:0002320,1.09e-08,361;CL:0002616,2.90e-08,1;CL:0002581,6.63e-08,1;CL:0000219,9.82e-08,386;CL:0000327,4.56e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.93e-08!5;DOID:450!3.93e-08!5;DOID:66!3.93e-08!5;DOID:423!3.93e-08!5;DOID:0080000!3.93e-08!5;DOID:11722!3.93e-08!5 | |ontology_enrichment_disease=DOID:17!3.93e-08!5;DOID:450!3.93e-08!5;DOID:66!3.93e-08!5;DOID:423!3.93e-08!5;DOID:0080000!3.93e-08!5;DOID:11722!3.93e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.17e-12;5!DOID:450;1.17e-12;5!DOID:66;1.17e-12;5!DOID:423;1.17e-12;5!DOID:0080000;1.17e-12;5!DOID:11722;1.17e-12;5 | |ontology_enrichment_disease_v019=DOID:17;1.17e-12;5!DOID:450;1.17e-12;5!DOID:66;1.17e-12;5!DOID:423;1.17e-12;5!DOID:0080000;1.17e-12;5!DOID:11722;1.17e-12;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.15e-12,5;DOID:450,1.15e-12,5;DOID:66,1.15e-12,5;DOID:423,1.15e-12,5;DOID:0080000,1.15e-12,5;DOID:11722,1.15e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.88e-10!6;UBERON:0002358!3.88e-10!6;UBERON:0003684!3.88e-10!6;UBERON:0001178!3.88e-10!6;UBERON:0004457!1.05e-07!12;UBERON:0000042!1.05e-07!12;UBERON:0003102!3.06e-07!95;UBERON:0002097!3.77e-07!40;UBERON:0002199!9.05e-07!45;UBERON:0002416!9.05e-07!45 | |ontology_enrichment_uberon=UBERON:0003688!3.88e-10!6;UBERON:0002358!3.88e-10!6;UBERON:0003684!3.88e-10!6;UBERON:0001178!3.88e-10!6;UBERON:0004457!1.05e-07!12;UBERON:0000042!1.05e-07!12;UBERON:0003102!3.06e-07!95;UBERON:0002097!3.77e-07!40;UBERON:0002199!9.05e-07!45;UBERON:0002416!9.05e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.61e-28;6!UBERON:0002358;1.61e-28;6!UBERON:0003684;1.61e-28;6!UBERON:0001178;1.61e-28;6!UBERON:0004457;9.47e-27;9!UBERON:0000042;9.47e-27;9!UBERON:0000310;2.44e-17;10!UBERON:0001443;9.55e-16;11!UBERON:0005406;2.28e-14;2!UBERON:0001013;8.78e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.61e-28;6!UBERON:0002358;1.61e-28;6!UBERON:0003684;1.61e-28;6!UBERON:0001178;1.61e-28;6!UBERON:0004457;9.47e-27;9!UBERON:0000042;9.47e-27;9!UBERON:0000310;2.44e-17;10!UBERON:0001443;9.55e-16;11!UBERON:0005406;2.28e-14;2!UBERON:0001013;8.78e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.32e-28,6;UBERON:0002358,1.32e-28,6;UBERON:0003684,1.32e-28,6;UBERON:0001178,1.32e-28,6;UBERON:0004457,6.19e-20,12;UBERON:0000042,6.19e-20,12;UBERON:0000310,2.17e-17,10;UBERON:0001443,8.60e-16,11;UBERON:0005406,1.80e-14,2;UBERON:0002384,2.55e-08,371;UBERON:0002199,3.20e-08,46;UBERON:0002416,3.20e-08,46;UBERON:0001013,9.27e-08,14;UBERON:0002097,3.28e-07,41 | |||
|phase1_expression=4.1786027232228,4.06790995392868,3.10099689011137,6.00439790118782,0.893922188854576,3.48935409640147,2.53299878168311,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.0843174571537,0.50133791063589,1.30361867064741,0,1.45990461090791,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.989067717114227,0,0,0,0,0.554128230968366,0.438977620880838,0.612975591598039,0.300476117813194,0,2.87023417102179,3.20336083227851,1.27159140695737,0.900273288253207,0.412210116953756,3.09168648054755,2.04728541964749,0.337552664482532,0.292311015483596,0.757301322732344,1.10459878370759,0.323292113637624,4.26011511019937,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.904902010304444,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.178428988797162,0.315404830067869,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0,0.434418072340414,0,0,0,0,0,0,0,0,3.96972492510043,6.1384789315225,3.64858122762996,1.92208723883551,3.07024349440022,4.82561763430822,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,0.658589785919804,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0,0.378806010550178,0.754703705257725,0,0,0.151230923763239,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0.300515217994437,0,0,0.181848659202559,0.429642228169954,0,0.398095888698616,0,1.03018711554838,0.673498977531838,0,0,0.214441591374926,0,0,0,0.244736704506468,0.358177682162975,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,1.8374728641192,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0.684466602170562,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr6:75822973..75822991,- | |short_description=p@chr6:75822973..75822991,- | ||
}} | }} |
Latest revision as of 03:12, 31 July 2015
Short description: | p@chr6:75822973..75822991, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75822973..75822991, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.14e-27 | 12 |
preadipocyte of the breast | 1.12e-21 | 3 |
fat cell | 1.62e-21 | 15 |
omentum preadipocyte | 3.61e-21 | 3 |
fibroblast | 4.87e-17 | 76 |
adipocyte of breast | 4.89e-15 | 2 |
skin fibroblast | 1.65e-13 | 23 |
GAG secreting cell | 1.10e-11 | 9 |
carbohydrate secreting cell | 1.10e-11 | 9 |
chondroblast | 2.67e-10 | 6 |
chondrocyte | 2.67e-10 | 6 |
adipocyte of omentum tissue | 2.78e-10 | 3 |
mesenchymal cell | 5.83e-09 | 354 |
connective tissue cell | 1.09e-08 | 361 |
perirenal adipocyte cell | 2.90e-08 | 1 |
perirenal preadipocyte | 6.63e-08 | 1 |
motile cell | 9.82e-08 | 386 |
extracellular matrix secreting cell | 4.56e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.32e-28 | 6 |
peritoneum | 1.32e-28 | 6 |
abdominal cavity | 1.32e-28 | 6 |
visceral peritoneum | 1.32e-28 | 6 |
cavity lining | 6.19e-20 | 12 |
serous membrane | 6.19e-20 | 12 |
breast | 2.17e-17 | 10 |
chest | 8.60e-16 | 11 |
perirenal fat | 1.80e-14 | 2 |
connective tissue | 2.55e-08 | 371 |
integument | 3.20e-08 | 46 |
integumental system | 3.20e-08 | 46 |
adipose tissue | 9.27e-08 | 14 |
skin of body | 3.28e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.15e-12 | 5 |
myotonic disease | 1.15e-12 | 5 |
muscle tissue disease | 1.15e-12 | 5 |
myopathy | 1.15e-12 | 5 |
muscular disease | 1.15e-12 | 5 |
myotonic dystrophy | 1.15e-12 | 5 |