FFCP PHASE1:Hg19::chr6:79577721..79577739,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:79577721..79577739,+ | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_at_chr6:79577721..79577739,+ | |description=CAGE_peak_at_chr6:79577721..79577739,+ | ||
|id=chr6:79577721..79577739,+ | |id=chr6:79577721..79577739,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.24e-08!5 | |ontology_enrichment_celltype=CL:0002322!5.24e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.95e-18;2!CL:0000242;1.95e-18;2!CL:0002319;3.58e-15;25!CL:0000540;7.30e-14;6!CL:0000404;7.30e-14;6!CL:0000333;5.21e-08;5!CL:0000312;6.42e-08;5!CL:0000095;1.50e-07;17!CL:0000240;9.82e-07;6!CL:0000311;9.82e-07;6!CL:0000079;9.82e-07;6!CL:0000237;9.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.71e-18,2;CL:0002319,3.58e-15,25;CL:0000540,8.33e-14,6;CL:0000031,8.33e-14,6;CL:0000404,8.33e-14,6;CL:0000047,1.73e-10,8;CL:0000133,2.37e-10,59;CL:0000221,2.64e-08,72;CL:0000312,6.10e-08,5;CL:0000095,1.42e-07,17;CL:0000123,1.42e-07,17;CL:0000333,6.88e-07,41;CL:0000240,9.42e-07,6;CL:0000311,9.42e-07,6;CL:0000079,9.42e-07,6;CL:0000237,9.42e-07,6;CL:0000036,9.42e-07,6;CL:0000357,9.42e-07,6;CL:0000114,9.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;7.30e-14;6!UBERON:0004140;6.61e-10;1!CL:0000357;9.82e-07;6!CL:0000114;9.82e-07;6 | |||
|ontology_enrichment_disease=DOID:162!7.06e-17!235;DOID:14566!4.63e-16!239;DOID:305!4.36e-11!106;DOID:0050687!7.62e-11!143;DOID:0050686!1.04e-07!137;DOID:4362!3.43e-07!5 | |ontology_enrichment_disease=DOID:162!7.06e-17!235;DOID:14566!4.63e-16!239;DOID:305!4.36e-11!106;DOID:0050687!7.62e-11!143;DOID:0050686!1.04e-07!137;DOID:4362!3.43e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;5.78e-08;5!DOID:169;8.26e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.95e-08,5;DOID:169,8.64e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000002!7.62e-08!6;UBERON:0001560!7.62e-08!6 | |ontology_enrichment_uberon=UBERON:0000002!7.62e-08!6;UBERON:0001560!7.62e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.21e-08;5!UBERON:0002410;5.21e-08;5!UBERON:0000002;9.01e-07;6!UBERON:0001560;9.01e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.49e-08,5;UBERON:0002410,5.49e-08,5;UBERON:0000002,7.92e-07,6;UBERON:0001560,7.92e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,1.06023814657188,0.464775771478074,0.414644220061482,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0.569134746787313,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,1.84344458585075,0.894704431569664,1.16794399198336,0,0,0,0,0,2.81974010175699,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,1.76352923497993,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0,0,0.221158519862449,0,0,0.32681539055697,0.139423744278603,0.0769502585037971,0,0,0.538545866458633,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0.485560759068186,0.789168805698781,0,0,0,1.35291077473043,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0,0,0,0.451961481561065,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,1.02956998717179,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,1.07493555978762,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,1.12527203925513,2.33817042215297,4.15440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,1.52183498429854,0,0,0,0,1.40500471742064,2.3187364577732,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,21.6141487503171,1.1860729253635,0,0,0.169732529954025,0,0.247871528518004,0,0,0.23658523500376,0.80057074828547,0,0,0,1.41696576325585,0,0,0,0,0,0,0.294443155503077,0.471878893390961,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0,0.230467975111559,0,0,0.0657727735628491,0,0.222462803784138,0,0,0,0,0,0,0,2.05417695252545,0.813689977576877,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,3.27515248846948,4.77481860387284,0,2.14597555874024,0.659643100472575,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0,0,0.252332849670158,1.20192129160065,0.126698501011437,0.917899467677836,0,1.8378979906969,0.50141507858475,0.151557396436479,0,0,0,0,0,0.129177819672012,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,1.06023814657188,0.464775771478074,0.414644220061482,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0.569134746787313,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,1.84344458585075,0.894704431569664,1.16794399198336,0,0,0,0,0,2.81974010175699,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,1.76352923497993,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0,0,0.221158519862449,0,0,0.32681539055697,0.139423744278603,0.0769502585037971,0,0,0.538545866458633,0,0,0,0,0,0.156980256395025,0.664846727600626,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0.485560759068186,0.789168805698781,0,0,0,1.35291077473043,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0,0,0,0.451961481561065,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,1.02956998717179,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,1.07493555978762,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,1.12527203925513,2.33817042215297,4.15440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,1.52183498429854,0,0,0,0,1.40500471742064,2.3187364577732,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,21.6141487503171,1.1860729253635,0,0,0.169732529954025,0,0.247871528518004,0,0,0.23658523500376,0.80057074828547,0,0,0,1.41696576325585,0,0,0,0,0,0,0.294443155503077,0.471878893390961,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0,0.230467975111559,0,0,0.0657727735628491,0,0.222462803784138,0,0,0,0,0,0,0,2.05417695252545,0.813689977576877,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,3.27515248846948,4.77481860387284,0,2.14597555874024,0.659643100472575,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0,0,0.252332849670158,1.20192129160065,0.126698501011437,0.917899467677836,0,1.8378979906969,0.50141507858475,0.151557396436479,0,0,0,0,0,0.129177819672012,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr6:79577721..79577739,+ | |short_description=p@chr6:79577721..79577739,+ | ||
}} | }} |
Latest revision as of 03:21, 31 July 2015
Short description: | p@chr6:79577721..79577739, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:79577721..79577739, + |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.71e-18 | 2 |
neural cell | 3.58e-15 | 25 |
neuron | 8.33e-14 | 6 |
neuroblast | 8.33e-14 | 6 |
electrically signaling cell | 8.33e-14 | 6 |
neuronal stem cell | 1.73e-10 | 8 |
neurectodermal cell | 2.37e-10 | 59 |
ectodermal cell | 2.64e-08 | 72 |
keratinocyte | 6.10e-08 | 5 |
neuron associated cell | 1.42e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.42e-07 | 17 |
migratory neural crest cell | 6.88e-07 | 41 |
stratified squamous epithelial cell | 9.42e-07 | 6 |
keratin accumulating cell | 9.42e-07 | 6 |
stratified epithelial cell | 9.42e-07 | 6 |
keratinizing barrier epithelial cell | 9.42e-07 | 6 |
epithelial fate stem cell | 9.42e-07 | 6 |
stratified epithelial stem cell | 9.42e-07 | 6 |
surface ectodermal cell | 9.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.49e-08 | 5 |
autonomic nervous system | 5.49e-08 | 5 |
uterine cervix | 7.92e-07 | 6 |
neck of organ | 7.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.95e-08 | 5 |
neuroendocrine tumor | 8.64e-07 | 6 |