FFCP PHASE1:Hg19::chr7:141730341..141730356,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:141730341..141730356,+ | |||
|coexpression_cluster_id=C4661 | |||
|description=CAGE_peak_at_chr7:141730341..141730356,+ | |||
|id=chr7:141730341..141730356,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.66e-08!42;CL:0000860!4.71e-07!45;CL:0000144!7.44e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000771;2.86e-12;2!CL:0000197;2.55e-09;6!CL:0000098;2.55e-09;6!CL:0002167;2.55e-09;6!CL:0002541;1.16e-08;3!CL:0000860;1.63e-08;33!CL:0002057;1.63e-08;33!CL:0000766;4.52e-08;69!CL:0000473;7.06e-07;39!CL:0000234;7.06e-07;39!CL:0000094;8.54e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.64e-12,2;CL:0000766,3.37e-10,72;CL:0000197,2.59e-09,6;CL:0000098,2.59e-09,6;CL:0002167,2.59e-09,6;CL:0000860,3.46e-09,42;CL:0002057,3.46e-09,42;CL:0002541,1.18e-08,3;CL:0000473,7.39e-08,48;CL:0000234,7.39e-08,48;CL:0002194,1.85e-07,59;CL:0000576,1.85e-07,59;CL:0000040,1.85e-07,59;CL:0000559,1.85e-07,59;CL:0002009,3.66e-07,61;CL:0000094,7.88e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-08;42 | |||
|ontology_enrichment_disease=DOID:2394!2.25e-13!14;DOID:120!5.23e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2513;2.99e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.99e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.16e-08;3!UBERON:0000920;1.16e-08;3!UBERON:0007195;3.56e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.18e-08,3;UBERON:0007195,3.57e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,0,2.18441372130172,0.527533956456907,0,0,0.672325146451775,0,0,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,1.30206522429511,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,1.72372840368309,1.29096936716765,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,1.7412554317715,1.13477044938228,0.622822248995575,0,0,0,1.81619850790011,2.20966581592539,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,1.32409180813219,0,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.439001141634502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.358234090811393,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44030255766841,10.4584015032035,8.69765023283896,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,1.65766205374414,0,0,0,3.11956292296211,6.95873056308931,2.99634588564476,0.234282829985426,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.06727557803444,0,0,0,0.248107807818777,1.2276957863045,0,0.256278298511402,0,0.482561763430822,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,4.66559381492711,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.64127056201227,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.265841714557995,1.04349012362347,0.450772826991655,10.2817407285575,1.22061219961398,0.181848659202559,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,3.7104720648635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.90691047733584,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:141730341..141730356,+ | |||
}} |
Latest revision as of 06:50, 31 July 2015
Short description: | p@chr7:141730341..141730356, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:141730341..141730356, + |
Coexpression cluster: | C4661_Mesothelial_mesenchymal_Olfactory_basal_chorionic_mesothelioma_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.64e-12 | 2 |
myeloid leukocyte | 3.37e-10 | 72 |
receptor cell | 2.59e-09 | 6 |
sensory epithelial cell | 2.59e-09 | 6 |
olfactory epithelial cell | 2.59e-09 | 6 |
classical monocyte | 3.46e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-09 | 42 |
chorionic membrane mesenchymal stem cell | 1.18e-08 | 3 |
defensive cell | 7.39e-08 | 48 |
phagocyte | 7.39e-08 | 48 |
monopoietic cell | 1.85e-07 | 59 |
monocyte | 1.85e-07 | 59 |
monoblast | 1.85e-07 | 59 |
promonocyte | 1.85e-07 | 59 |
macrophage dendritic cell progenitor | 3.66e-07 | 61 |
granulocyte | 7.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.18e-08 | 3 |
stroma of bone marrow | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.99e-07 | 1 |