FFCP PHASE1:Hg19::chr7:143953304..143953314,-: Difference between revisions
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|id=chr7:143953304..143953314,-
|short_description=p1@uc003wed.2
|description=CAGE_peak_1_at_uc003wed.2_5end
|association_with_transcript=11bp_to_uc003wed.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_uc003wed.2_5end | |||
|cluster_id=chr7:143953304..143953314,- | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_1_at_uc003wed.2_5end | |||
|id=chr7:143953304..143953314,- | |||
|ontology_enrichment_celltype=CL:0000159!9.95e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.74e-12;3!CL:0000569;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.59e-12,3;CL:0000569,1.32e-09,4;CL:0000011,1.32e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.50e-09;4 | |||
|ontology_enrichment_disease=DOID:0050687!8.32e-14!143;DOID:14566!2.58e-12!239;DOID:305!1.48e-11!106;DOID:162!8.89e-11!235;DOID:1749!1.06e-09!14;DOID:299!5.45e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002394!1.78e-16!4;UBERON:0003928!1.78e-16!4;UBERON:0002294!1.66e-14!7;UBERON:0001173!1.66e-14!7;UBERON:0004912!1.66e-14!7;UBERON:0000010!2.93e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4!UBERON:0000945;6.78e-08;5!UBERON:0010039;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6 | |||
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| ||
|short_description=p1@uc003wed.2 | |||
}} | }} |
Latest revision as of 07:09, 31 July 2015
Short description: | p1@uc003wed.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003wed.2_5end |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | 11bp_to_uc003wed.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.59e-12 | 3 |
cardiac mesenchymal cell | 1.32e-09 | 4 |
migratory trunk neural crest cell | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
bile duct | 7.17e-07 | 6 |
digestive system duct | 7.17e-07 | 6 |