FFCP PHASE1:Hg19::chr7:54900686..54900691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:54900686..54900691,- | |||
|coexpression_cluster_id=C373 | |coexpression_cluster_id=C373 | ||
|description=CAGE_peak_at_chr7:54900686..54900691,- | |description=CAGE_peak_at_chr7:54900686..54900691,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002535!7.98e-10!2 | |ontology_enrichment_celltype=CL:0002535!7.98e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2 | |ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4468!3.62e-34!2;DOID:305!1.76e-09!106;DOID:0050687!7.40e-07!143 | |ontology_enrichment_disease=DOID:4468!3.62e-34!2;DOID:305!1.76e-09!106;DOID:0050687!7.40e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.55e-29;14!DOID:4362;4.21e-21;5 | |ontology_enrichment_disease_v019=DOID:1749;2.55e-29;14!DOID:4362;4.21e-21;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.55e-29,14;DOID:4362,4.21e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.95e-17!9;UBERON:0006955!7.98e-10!2;UBERON:0004801!7.98e-10!2;UBERON:0001557!1.93e-08!19 | |ontology_enrichment_uberon=UBERON:0001737!3.95e-17!9;UBERON:0006955!7.98e-10!2;UBERON:0004801!7.98e-10!2;UBERON:0001557!1.93e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6 | |||
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|short_description=p@chr7:54900686..54900691,- | |short_description=p@chr7:54900686..54900691,- | ||
}} | }} |
Latest revision as of 10:46, 31 July 2015
Short description: | p@chr7:54900686..54900691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:54900686..54900691, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-50 | 2 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-50 | 2 |
cervix epithelium | 2.74e-50 | 2 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.55e-29 | 14 |
cervical cancer | 4.21e-21 | 5 |