FFCP PHASE1:Hg19::chr7:73477638..73477666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:73477638..73477666,+ | |||
|coexpression_cluster_id=C379 | |coexpression_cluster_id=C379 | ||
|description=CAGE_peak_at_chr7:73477638..73477666,+ | |description=CAGE_peak_at_chr7:73477638..73477666,+ | ||
|id=chr7:73477638..73477666,+ | |id=chr7:73477638..73477666,+ | ||
|ontology_enrichment_celltype=CL:0002615;4.10e-15;3!CL:0002580;7.34e-15;3!CL:0002579;6.10e-14;3!CL:0002334;3.23e-13;12!CL:0000136;1.74e-12;13!CL:0000153;1.01e-11;9!CL:0000447;1.01e-11;9!CL:0002617;1.53e-10;2!CL:0000138;5.83e-07;6!CL:0000327;6.14e-07;15 | |ontology_enrichment_celltype=CL:0000153!3.75e-08!9;CL:0000447!3.75e-08!9;CL:0000057!9.58e-08!75;CL:0000055!2.50e-07!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0002615;4.10e-15;3!CL:0002580;7.34e-15;3!CL:0002579;6.10e-14;3!CL:0002334;3.23e-13;12!CL:0000136;1.74e-12;13!CL:0000153;1.01e-11;9!CL:0000447;1.01e-11;9!CL:0002617;1.53e-10;2!CL:0000138;5.83e-07;6!CL:0000327;6.14e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.25e-15,3;CL:0002580,6.86e-15,3;CL:0002579,1.04e-13,3;CL:0002334,4.07e-13,12;CL:0000153,8.86e-12,9;CL:0000447,8.86e-12,9;CL:0000136,9.13e-11,15;CL:0002617,1.15e-10,2;CL:0000058,5.66e-07,6;CL:0000138,5.66e-07,6;CL:0000327,5.71e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004457;4.98e-31;9!UBERON:0000042;4.98e-31;9!UBERON:0003688;2.85e-27;6!UBERON:0002358;2.85e-27;6!UBERON:0003684;2.85e-27;6!UBERON:0001178;2.85e-27;6!UBERON:0001443;9.66e-15;11!UBERON:0000310;1.10e-11;10!UBERON:0004458;6.37e-07;48 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.70e-10!6;UBERON:0002358!1.70e-10!6;UBERON:0003684!1.70e-10!6;UBERON:0001178!1.70e-10!6;UBERON:0004457!1.91e-10!12;UBERON:0000042!1.91e-10!12;UBERON:0001443!4.36e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.98e-31;9!UBERON:0000042;4.98e-31;9!UBERON:0003688;2.85e-27;6!UBERON:0002358;2.85e-27;6!UBERON:0003684;2.85e-27;6!UBERON:0001178;2.85e-27;6!UBERON:0001443;9.66e-15;11!UBERON:0000310;1.10e-11;10!UBERON:0004458;6.37e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,7.46e-29,12;UBERON:0000042,7.46e-29,12;UBERON:0003688,7.43e-27,6;UBERON:0002358,7.43e-27,6;UBERON:0003684,7.43e-27,6;UBERON:0001178,7.43e-27,6;UBERON:0001443,7.24e-15,11;UBERON:0000310,9.31e-12,10;UBERON:0009569,1.56e-11,112;UBERON:0004458,8.27e-09,49;UBERON:0004923,3.08e-07,66;UBERON:0000915,5.19e-07,52 | |||
|phase1_expression=3.99692434395225,3.42560838225573,5.07435854745496,3.00219895059391,3.12872766099101,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.15877215168659,1.5905718941022,0.973269740605272,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48360157567134,0,0,0,0,0,0,3.37136575378922,4.5071417671979,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0.558350568994769,0.337552664482532,0.292311015483596,0.504867548488229,0,0.161646056818812,0,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,2.29723871668228,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.788512075169673,0,0,2.27407504055985,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,2.30192959932094,4.77122160536225,1.02511319404561,3.58195074346692,1.12597744800525,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,1.26664581178598,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0,0,0,0,3.58646378851925,0,0,0,0,2.17727711363265,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,1.37897349296586,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0,0,0.858452096273142,0,2.28423806454869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0,0,0,0.320362237703084,3.14408610199332,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0.247871528518004,0,0.318004350653419,0,0,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,2.97726707033577,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,10.1999308542419,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,2.113278637917,0,0,2.8361470708374,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0,0.248298857183432,0,0.12729431655633,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,3.99192427855216,0,0,0,0,7.03922827210363,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=3.99692434395225,3.42560838225573,5.07435854745496,3.00219895059391,3.12872766099101,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.15877215168659,1.5905718941022,0.973269740605272,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48360157567134,0,0,0,0,0,0,3.37136575378922,4.5071417671979,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0.558350568994769,0.337552664482532,0.292311015483596,0.504867548488229,0,0.161646056818812,0,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,2.29723871668228,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.788512075169673,0,0,2.27407504055985,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,2.30192959932094,4.77122160536225,1.02511319404561,3.58195074346692,1.12597744800525,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,1.26664581178598,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0,0,0,0,3.58646378851925,0,0,0,0,2.17727711363265,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,1.37897349296586,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0,0,0.858452096273142,0,2.28423806454869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0,0,0,0.320362237703084,3.14408610199332,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0.247871528518004,0,0.318004350653419,0,0,0.705351887381368,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,2.97726707033577,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,10.1999308542419,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,2.113278637917,0,0,2.8361470708374,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0,0.248298857183432,0,0.12729431655633,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,3.99192427855216,0,0,0,0,7.03922827210363,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr7:73477638..73477666,+ | |short_description=p@chr7:73477638..73477666,+ | ||
}} | }} |
Latest revision as of 11:31, 31 July 2015
Short description: | p@chr7:73477638..73477666, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73477638..73477666, + |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.25e-15 | 3 |
preadipocyte of the breast | 6.86e-15 | 3 |
omentum preadipocyte | 1.04e-13 | 3 |
preadipocyte | 4.07e-13 | 12 |
GAG secreting cell | 8.86e-12 | 9 |
carbohydrate secreting cell | 8.86e-12 | 9 |
fat cell | 9.13e-11 | 15 |
adipocyte of breast | 1.15e-10 | 2 |
chondroblast | 5.66e-07 | 6 |
chondrocyte | 5.66e-07 | 6 |
extracellular matrix secreting cell | 5.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 7.46e-29 | 12 |
serous membrane | 7.46e-29 | 12 |
omentum | 7.43e-27 | 6 |
peritoneum | 7.43e-27 | 6 |
abdominal cavity | 7.43e-27 | 6 |
visceral peritoneum | 7.43e-27 | 6 |
chest | 7.24e-15 | 11 |
breast | 9.31e-12 | 10 |
subdivision of trunk | 1.56e-11 | 112 |
body cavity or lining | 8.27e-09 | 49 |
organ component layer | 3.08e-07 | 66 |
thoracic segment of trunk | 5.19e-07 | 52 |