FFCP PHASE1:Hg19::chr7:73480017..73480028,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:73480017..73480028,+
|short_description=p@chr7:73480017..73480028,+
|description=CAGE_peak_at_chr7:73480017..73480028,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:73480017..73480028,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_at_chr7:73480017..73480028,+ | |||
|id=chr7:73480017..73480028,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.06e-13!75;CL:0002334!2.82e-11!12;CL:0000055!1.05e-10!180;CL:0002620!1.87e-10!23;CL:0000136!2.99e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.78e-12;12!CL:0002615;1.06e-10;3!CL:0002580;1.62e-10;3!CL:0000135;4.81e-10;3!CL:0000388;4.81e-10;3!CL:0002579;1.31e-09;3!CL:0000136;1.26e-08;13!CL:0000153;3.32e-08;9!CL:0000447;3.32e-08;9!CL:0002617;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-13,76;CL:0002334,6.10e-12,12;CL:0002615,1.08e-10,3;CL:0002580,1.68e-10,3;CL:0000135,5.53e-10,3;CL:0000388,5.53e-10,3;CL:0002579,1.07e-09,3;CL:0000136,1.42e-09,15;CL:0000153,3.20e-08,9;CL:0000447,3.20e-08,9;CL:0002617,1.07e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.32e-07!5;DOID:450!9.32e-07!5;DOID:66!9.32e-07!5;DOID:423!9.32e-07!5;DOID:0080000!9.32e-07!5;DOID:11722!9.32e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.44e-10!6;UBERON:0002358!2.44e-10!6;UBERON:0003684!2.44e-10!6;UBERON:0001178!2.44e-10!6;UBERON:0004457!6.61e-10!12;UBERON:0000042!6.61e-10!12;UBERON:0002199!1.52e-08!45;UBERON:0002416!1.52e-08!45;UBERON:0002097!2.74e-08!40;UBERON:0001443!9.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.61e-21;9!UBERON:0000042;5.61e-21;9!UBERON:0003688;1.41e-18;6!UBERON:0002358;1.41e-18;6!UBERON:0003684;1.41e-18;6!UBERON:0001178;1.41e-18;6!UBERON:0007846;4.81e-10;3!UBERON:0000043;4.81e-10;3!UBERON:0007845;4.81e-10;3!UBERON:0001443;6.71e-10;11!UBERON:0000310;5.11e-08;10!UBERON:0005406;1.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.17e-18,6;UBERON:0002358,1.17e-18,6;UBERON:0003684,1.17e-18,6;UBERON:0001178,1.17e-18,6;UBERON:0004457,2.06e-15,12;UBERON:0000042,2.06e-15,12;UBERON:0007846,5.53e-10,3;UBERON:0000043,5.53e-10,3;UBERON:0007845,5.53e-10,3;UBERON:0001443,6.07e-10,11;UBERON:0000310,5.16e-08,10;UBERON:0005406,1.52e-07,2 | |||
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| ||
|short_description=p@chr7:73480017..73480028,+ | |||
}} | }} |
Latest revision as of 11:31, 31 July 2015
Short description: | p@chr7:73480017..73480028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73480017..73480028, + |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.29e-13 | 76 |
preadipocyte | 6.10e-12 | 12 |
adipocyte of omentum tissue | 1.08e-10 | 3 |
preadipocyte of the breast | 1.68e-10 | 3 |
fibrocyte | 5.53e-10 | 3 |
tendon cell | 5.53e-10 | 3 |
omentum preadipocyte | 1.07e-09 | 3 |
fat cell | 1.42e-09 | 15 |
GAG secreting cell | 3.20e-08 | 9 |
carbohydrate secreting cell | 3.20e-08 | 9 |
adipocyte of breast | 1.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.17e-18 | 6 |
peritoneum | 1.17e-18 | 6 |
abdominal cavity | 1.17e-18 | 6 |
visceral peritoneum | 1.17e-18 | 6 |
cavity lining | 2.06e-15 | 12 |
serous membrane | 2.06e-15 | 12 |
dense regular connective tissue | 5.53e-10 | 3 |
tendon | 5.53e-10 | 3 |
regular connective tissue | 5.53e-10 | 3 |
chest | 6.07e-10 | 11 |
breast | 5.16e-08 | 10 |
perirenal fat | 1.52e-07 | 2 |