FFCP PHASE1:Hg19::chr7:94060182..94060195,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:94060182..94060195,+ to FFCP PHASE1:Hg19::chr7:94060182..94060195,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:94060182..94060195,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr7:94060182..94060195,+ | |||
|id=chr7:94060182..94060195,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.78e-31!180;CL:0000057!1.75e-19!75;CL:0000680!1.21e-13!57;CL:0000056!1.21e-13!57;CL:0000355!1.21e-13!57;CL:0000187!3.57e-13!54;CL:0000183!3.87e-13!59;CL:0000048!1.23e-12!430;CL:0000723!6.36e-12!436;CL:0002334!2.83e-11!12;CL:0000034!5.13e-11!444;CL:0000393!9.28e-11!60;CL:0000211!9.28e-11!60;CL:0000192!1.22e-09!42;CL:0000514!1.22e-09!42;CL:0002620!2.38e-09!23;CL:0002494!7.41e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.39e-10;12!CL:0002620;1.52e-07;23!CL:0002579;3.27e-07;3!CL:0002580;7.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.51e-13,76;CL:0002334,3.73e-10,12;CL:0002620,1.18e-07,23;CL:0002579,2.91e-07,3;CL:0002580,4.52e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.38e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.74e-07;5!DOID:450;1.74e-07;5!DOID:66;1.74e-07;5!DOID:423;1.74e-07;5!DOID:0080000;1.74e-07;5!DOID:11722;1.74e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.94e-07,5;DOID:450,1.94e-07,5;DOID:66,1.94e-07,5;DOID:423,1.94e-07,5;DOID:0080000,1.94e-07,5;DOID:11722,1.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.84e-14!61;UBERON:0002036!2.84e-14!61;UBERON:0003082!2.84e-14!61;UBERON:0000914!1.13e-13!83;UBERON:0002329!1.13e-13!83;UBERON:0003077!1.13e-13!83;UBERON:0003059!1.13e-13!83;UBERON:0007282!1.13e-13!83;UBERON:0009618!1.13e-13!83;UBERON:0007285!1.13e-13!83;UBERON:0002385!2.03e-13!63;UBERON:0001015!2.03e-13!63;UBERON:0000383!2.03e-13!63;UBERON:0004290!1.39e-12!70;UBERON:0000486!2.26e-10!82;UBERON:0002199!4.36e-07!45;UBERON:0002416!4.36e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.77e-07,46;UBERON:0002416,7.77e-07,46 | |||
|phase1_expression=2.18014055124668,0.856402095563933,4.51054093107108,0,0,1.74467704820074,2.53299878168311,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,1.46062018077475,0,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,1.0843174571537,1.50401373190767,2.02785126545153,0.795285947051099,1.94653948121054,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4364109856017,0.633152558322899,0.264818361626438,8.89193524321323,1.06400514659507,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,1.66493170409425,0.576175924479999,0,0.624320153660641,0,0,0,0,0,0,0,0,1.18800285728205,1.23633464639278,0,0,0.336672227908132,0,0,0.438977620880838,0.612975591598039,1.05166641234618,0.226864366320042,4.30535125653269,2.13557388818567,2.33125091275518,4.20127534518163,0.206105058476878,2.83404594050192,1.67505170698431,5.06328996723799,0.584622030967192,3.78650661366172,1.65689817556139,0.161646056818812,7.10019185033229,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,1.42198887333556,0,0.845302752556,1.32969058292435,0,0,0,0,0.57191197463259,1.08524321078289,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,6.44709670745502,5.17444067511769,4.1002627908823,1.99140405487612,1.50473049863859,0,1.03473071292505,0.664225598535437,0.553107505625109,0.260650843404249,1.56640925970192,1.37257369524342,0,0,0,0,1.66435439510497,0,2.23297027036899,1.84154367945675,2.80660094433074,5.12556597022804,1.53512174720011,3.86049410744658,2.96836132889982,0.616838775210622,1.24293207719189,0.246381468041427,0.519254429183621,0.813472649219715,0,0,0,0.34444334449382,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.429680979473094,1.16013355131383,0.170453254832202,0.445160178233687,0,0,0,0,0.464845549297286,9.12955805808856,1.3940745403212,1.54016790088044,0,0.869932992075073,0.18532421910392,0.429374660225974,0,0,0.762520775695299,0.511795582622668,0.42793898803392,0.318203247925937,0,0.899362287916574,0.274537029736055,0.117812402345686,1.41527737101321,1.58510321173008,0.842516912477962,0,0,0,0.682499557039929,0.848432591722276,0,0.551365343546124,0,0.438450885253763,0.578775534266688,1.9676842561399,0.405820753925408,0,0.281695602532241,0,0.196498082026242,0.35667105148125,0,1.05553817648832,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.593929361665277,1.53580351049616,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4335094148843,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.134366944973453,3.96329871896644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27134268827375,0,0.864221491201268,0.326587360109409,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.8697064787778,0.554805861502613,0.568209015825267,0.251567901752575,5.33886732957922,0.228840068396924,0.756154618816195,1.08806040407946,0.147855149989634,0.159296767163702,0,1.24210365501008,0.414706207840855,2.12673371646396,2.08698024724694,1.6528336989694,2.28483127301277,0,0.727394636810238,1.18151612746737,0.928067519756987,3.98095888698616,0.800055529326307,2.74716564146234,1.6837474438296,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,5.99549104274163,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,0,0.397832444232549,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0.116241425368125,0.347716544605159,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,11.6570638334193,0,0,0,0,0,0,0,3.27839340755936,0,0,0,0.196308467114945,0,7.1851473689178,2.71883383500507,0,0,0,0,0,0,1.46067277649303,0.4587292834045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| ||
|short_description=p@chr7:94060182..94060195,+ | |||
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Latest revision as of 12:48, 31 July 2015
Short description: | p@chr7:94060182..94060195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94060182..94060195, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.51e-13 | 76 |
preadipocyte | 3.73e-10 | 12 |
skin fibroblast | 1.18e-07 | 23 |
omentum preadipocyte | 2.91e-07 | 3 |
preadipocyte of the breast | 4.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 7.77e-07 | 46 |
integumental system | 7.77e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.94e-07 | 5 |
myotonic disease | 1.94e-07 | 5 |
muscle tissue disease | 1.94e-07 | 5 |
myopathy | 1.94e-07 | 5 |
muscular disease | 1.94e-07 | 5 |
myotonic dystrophy | 1.94e-07 | 5 |