FFCP PHASE1:Hg19::chr9:101832269..101832284,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:101832269..101832284,+ to FFCP PHASE1:Hg19::chr9:101832269..101832284,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:101832269..101832284,+ | |||
|coexpression_cluster_id=C1096 | |||
|description=CAGE_peak_at_chr9:101832269..101832284,+ | |||
|id=chr9:101832269..101832284,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.58e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000138;3.96e-09;6!CL:0000153;4.59e-08;9!CL:0000447;4.59e-08;9!CL:0002622;6.89e-08;3!CL:0000499;6.48e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.61e-09,6;CL:0000138,4.61e-09,6;CL:0000153,5.43e-08,9;CL:0000447,5.43e-08,9;CL:0002622,6.34e-08,3;CL:0000499,6.90e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.67e-10;4!UBERON:0007284;8.67e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.49e-10!9;UBERON:0007023!1.98e-09!115;UBERON:0001557!4.50e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.97e-19;9!UBERON:0001557;6.97e-19;9!UBERON:0003978;8.90e-08;3!UBERON:0000946;8.90e-08;3!UBERON:0011135;1.49e-07;5!UBERON:0002216;1.49e-07;5!UBERON:0011134;1.49e-07;5!UBERON:0002209;1.49e-07;5!UBERON:0002213;1.49e-07;5!UBERON:0007844;1.49e-07;5!UBERON:0011138;1.49e-07;5!UBERON:0001130;1.49e-07;5!UBERON:0001066;1.49e-07;5!UBERON:0001468;1.49e-07;5!UBERON:0000922;2.28e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.86e-19,9;UBERON:0001557,8.41e-12,19;UBERON:0003978,9.66e-08,3;UBERON:0009751,9.66e-08,3;UBERON:0000946,9.66e-08,3;UBERON:0002523,9.66e-08,3;UBERON:0005983,9.66e-08,3;UBERON:0002165,9.66e-08,3;UBERON:0002062,9.66e-08,3;UBERON:0007280,9.66e-08,3;UBERON:0011135,1.32e-07,5;UBERON:0002216,1.32e-07,5;UBERON:0011134,1.32e-07,5;UBERON:0002209,1.32e-07,5;UBERON:0002213,1.32e-07,5;UBERON:0005856,1.32e-07,5;UBERON:0005866,1.32e-07,5;UBERON:0005863,1.32e-07,5;UBERON:0007844,1.32e-07,5;UBERON:0011138,1.32e-07,5;UBERON:0001130,1.32e-07,5;UBERON:0001066,1.32e-07,5;UBERON:0001468,1.32e-07,5;UBERON:0003101,8.73e-07,22;UBERON:0000079,8.73e-07,22 | |||
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| ||
|short_description=p@chr9:101832269..101832284,+ | |||
}} | }} |
Latest revision as of 21:07, 31 July 2015
Short description: | p@chr9:101832269..101832284, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:101832269..101832284, + |
Coexpression cluster: | C1096_Olfactory_Chondrocyte_Prostate_sacrococcigeal_Ewing_Smooth_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.61e-09 | 6 |
chondrocyte | 4.61e-09 | 6 |
GAG secreting cell | 5.43e-08 | 9 |
carbohydrate secreting cell | 5.43e-08 | 9 |
prostate stromal cell | 6.34e-08 | 3 |
stromal cell | 6.90e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.86e-19 | 9 |
upper respiratory tract | 8.41e-12 | 19 |
valve | 9.66e-08 | 3 |
cardiac mesenchyme | 9.66e-08 | 3 |
cardial valve | 9.66e-08 | 3 |
tunica intima | 9.66e-08 | 3 |
heart layer | 9.66e-08 | 3 |
endocardium | 9.66e-08 | 3 |
endocardial cushion | 9.66e-08 | 3 |
presumptive endocardium | 9.66e-08 | 3 |
intervertebral cartilage | 1.32e-07 | 5 |
symphysis | 1.32e-07 | 5 |
nonsynovial joint | 1.32e-07 | 5 |
fibrous joint | 1.32e-07 | 5 |
cartilaginous joint | 1.32e-07 | 5 |
developing mesenchymal condensation | 1.32e-07 | 5 |
pre-cartilage condensation | 1.32e-07 | 5 |
cartilaginous condensation | 1.32e-07 | 5 |
cartilage element | 1.32e-07 | 5 |
post-cranial axial skeletal system | 1.32e-07 | 5 |
vertebral column | 1.32e-07 | 5 |
intervertebral disk | 1.32e-07 | 5 |
intervertebral joint | 1.32e-07 | 5 |
male organism | 8.73e-07 | 22 |
male reproductive system | 8.73e-07 | 22 |