FFCP PHASE1:Hg19::chr9:139089234..139089236,-: Difference between revisions
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|id=chr9:139089234..139089236,-
|short_description=p@chr9:139089234..139089236,-
|description=CAGE_peak_at_chr9:139089234..139089236,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:139089234..139089236,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr9:139089234..139089236,- | |||
|id=chr9:139089234..139089236,- | |||
|ontology_enrichment_celltype=CL:0000242!8.82e-51!2;CL:0000312!4.92e-21!5;CL:0000240!1.03e-17!6;CL:0000311!1.03e-17!6;CL:0000079!1.03e-17!6;CL:0000237!1.03e-17!6;CL:0000036!1.03e-17!6;CL:0000357!1.03e-17!6;CL:0000114!1.03e-17!6;CL:0000362!1.51e-13!8;CL:0000095!1.45e-12!17;CL:0000123!1.45e-12!17;CL:0002319!4.87e-09!25;CL:0002159!1.04e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.29e-195;2!CL:0000242;3.29e-195;2!CL:0000312;3.49e-79;5!CL:0000240;2.83e-66;6!CL:0000311;2.83e-66;6!CL:0000079;2.83e-66;6!CL:0000237;2.83e-66;6!CL:0000362;9.75e-45;9!CL:0002159;2.55e-29;14!CL:0000095;5.37e-22;17!CL:0002319;6.71e-16;25!CL:0002077;1.77e-12;34!CL:0000076;1.47e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.29e-195,2;CL:0000312,3.49e-79,5;CL:0000240,2.83e-66,6;CL:0000311,2.83e-66,6;CL:0000079,2.83e-66,6;CL:0000237,2.83e-66,6;CL:0000036,2.83e-66,6;CL:0000357,2.83e-66,6;CL:0000114,2.83e-66,6;CL:0000362,9.75e-45,9;CL:0002159,2.55e-29,14;CL:0000095,5.37e-22,17;CL:0000123,5.37e-22,17;CL:0002319,6.71e-16,25;CL:0002077,6.62e-13,34;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;2.83e-66;6!CL:0000114;2.83e-66;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!9.73e-56!4;UBERON:0010133!9.73e-56!4;UBERON:0001905!8.50e-50!2;UBERON:0002757!8.50e-50!2;UBERON:0010134!8.50e-50!2;UBERON:0002784!8.50e-50!2;UBERON:0005408!8.50e-50!2;UBERON:0001899!8.50e-50!2;UBERON:0001894!2.86e-32!7;UBERON:0006222!2.86e-32!7;UBERON:0000007!9.40e-14!2;UBERON:0003056!3.32e-10!61;UBERON:0002780!7.93e-10!41;UBERON:0001890!7.93e-10!41;UBERON:0006240!7.93e-10!41;UBERON:0003080!1.31e-09!42;UBERON:0000955!6.15e-09!69;UBERON:0006238!6.15e-09!69;UBERON:0001003!3.76e-08!14;UBERON:0007376!3.76e-08!14;UBERON:0007383!3.76e-08!14;UBERON:0001017!1.40e-07!82;UBERON:0003075!2.53e-07!86;UBERON:0007284!2.53e-07!86;UBERON:0005743!3.05e-07!86;UBERON:0001049!3.21e-07!57;UBERON:0005068!3.21e-07!57;UBERON:0006241!3.21e-07!57;UBERON:0007135!3.21e-07!57;UBERON:0004121!4.76e-07!169;UBERON:0002368!5.08e-07!35;UBERON:0002346!5.23e-07!90;UBERON:0002616!5.44e-07!59;UBERON:0000924!6.94e-07!173;UBERON:0006601!6.94e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.82e-27;15!UBERON:0007376;1.82e-27;15!UBERON:0010371;1.84e-13;31!UBERON:0003102;8.55e-09;50!UBERON:0002097;3.55e-08;41!UBERON:0002199;1.47e-07;46!UBERON:0002416;1.47e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.82e-27,15;UBERON:0007376,1.82e-27,15;UBERON:0007383,1.82e-27,15;UBERON:0002097,6.32e-11,41;UBERON:0002199,7.07e-10,46;UBERON:0002416,7.07e-10,46 | |||
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|short_description=p@chr9:139089234..139089236,- | |||
}} | }} |
Latest revision as of 00:16, 1 August 2015
Short description: | p@chr9:139089234..139089236, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139089234..139089236, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.29e-195 | 2 |
keratinocyte | 3.49e-79 | 5 |
stratified squamous epithelial cell | 2.83e-66 | 6 |
keratin accumulating cell | 2.83e-66 | 6 |
stratified epithelial cell | 2.83e-66 | 6 |
keratinizing barrier epithelial cell | 2.83e-66 | 6 |
epithelial fate stem cell | 2.83e-66 | 6 |
stratified epithelial stem cell | 2.83e-66 | 6 |
surface ectodermal cell | 2.83e-66 | 6 |
epidermal cell | 9.75e-45 | 9 |
general ecto-epithelial cell | 2.55e-29 | 14 |
neuron associated cell | 5.37e-22 | 17 |
neuron associated cell (sensu Vertebrata) | 5.37e-22 | 17 |
neural cell | 6.71e-16 | 25 |
ecto-epithelial cell | 6.62e-13 | 34 |
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.82e-27 | 15 |
outer epithelium | 1.82e-27 | 15 |
enveloping layer of ectoderm | 1.82e-27 | 15 |
skin of body | 6.32e-11 | 41 |
integument | 7.07e-10 | 46 |
integumental system | 7.07e-10 | 46 |