FFCP PHASE1:Hg19::chr9:139929577..139929581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:139929577..139929581,+ | |||
|coexpression_cluster_id=C2576 | |||
|description=CAGE_peak_at_chr9:139929577..139929581,+ | |description=CAGE_peak_at_chr9:139929577..139929581,+ | ||
|id=chr9:139929577..139929581,+ | |id=chr9:139929577..139929581,+ | ||
|ontology_enrichment_celltype=CL:0000197!8.90e-13!6;CL:0000098!8.90e-13!6;CL:0002167!8.90e-13!6;CL:0002588!2.02e-10!2;CL:0000393!2.36e-08!60;CL:0000211!2.36e-08!60;CL:0002539!1.39e-07!10;CL:0000540!3.45e-07!6;CL:0000031!3.45e-07!6;CL:0000404!3.45e-07!6 | |ontology_enrichment_celltype=CL:0000197!8.90e-13!6;CL:0000098!8.90e-13!6;CL:0002167!8.90e-13!6;CL:0002588!2.02e-10!2;CL:0000393!2.36e-08!60;CL:0000211!2.36e-08!60;CL:0002539!1.39e-07!10;CL:0000540!3.45e-07!6;CL:0000031!3.45e-07!6;CL:0000404!3.45e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000197;3.57e-30;6!CL:0000098;3.57e-30;6!CL:0002167;3.57e-30;6!CL:0000075;3.74e-12;27!CL:0002588;3.18e-11;2!CL:0000710;1.51e-09;20!CL:0002539;5.80e-09;10!CL:0000746;6.56e-08;3!CL:0002580;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.40e-30,6;CL:0000098,3.40e-30,6;CL:0002167,3.40e-30,6;CL:0000075,3.64e-12,27;CL:0002588,3.70e-11,2;CL:0000710,1.49e-09,20;CL:0002539,5.57e-09,10;CL:0002580,5.18e-08,3;CL:0000746,6.78e-08,3;CL:0000513,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000513;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002066!2.09e-14!5;UBERON:0002049!1.20e-10!79;UBERON:0007798!1.20e-10!79;UBERON:0001981!9.95e-10!60;UBERON:0007500!9.95e-10!60;UBERON:0004537!9.95e-10!60;UBERON:0006965!9.95e-10!60;UBERON:0000947!1.12e-09!21;UBERON:0010191!1.12e-09!21;UBERON:0000055!1.69e-09!69;UBERON:0004535!7.82e-09!110;UBERON:0004872!1.55e-08!84;UBERON:0001009!1.70e-08!113;UBERON:0001638!4.87e-08!9;UBERON:0003920!4.87e-08!9;UBERON:0004582!4.87e-08!9;UBERON:0004237!1.39e-07!10;UBERON:0004695!1.39e-07!10;UBERON:0002111!1.39e-07!10;UBERON:0004178!1.39e-07!10;UBERON:0001637!4.58e-07!42;UBERON:0003509!4.58e-07!42;UBERON:0004572!4.58e-07!42 | |ontology_enrichment_uberon=UBERON:0002066!2.09e-14!5;UBERON:0002049!1.20e-10!79;UBERON:0007798!1.20e-10!79;UBERON:0001981!9.95e-10!60;UBERON:0007500!9.95e-10!60;UBERON:0004537!9.95e-10!60;UBERON:0006965!9.95e-10!60;UBERON:0000947!1.12e-09!21;UBERON:0010191!1.12e-09!21;UBERON:0000055!1.69e-09!69;UBERON:0004535!7.82e-09!110;UBERON:0004872!1.55e-08!84;UBERON:0001009!1.70e-08!113;UBERON:0001638!4.87e-08!9;UBERON:0003920!4.87e-08!9;UBERON:0004582!4.87e-08!9;UBERON:0004237!1.39e-07!10;UBERON:0004695!1.39e-07!10;UBERON:0002111!1.39e-07!10;UBERON:0004178!1.39e-07!10;UBERON:0001637!4.58e-07!42;UBERON:0003509!4.58e-07!42;UBERON:0004572!4.58e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;5.80e-09;10!UBERON:0004695;5.80e-09;10!UBERON:0002111;5.80e-09;10!UBERON:0004178;5.80e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,5.57e-09,10;UBERON:0004695,5.57e-09,10;UBERON:0002111,5.57e-09,10;UBERON:0004178,5.57e-09,10 | |||
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|short_description=p@chr9:139929577..139929581,+ | |short_description=p@chr9:139929577..139929581,+ | ||
}} | }} |
Latest revision as of 00:34, 1 August 2015
Short description: | p@chr9:139929577..139929581, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139929577..139929581, + |
Coexpression cluster: | C2576_Lens_Preadipocyte_Olfactory_Fibroblast_Cardiac_Smooth_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.40e-30 | 6 |
sensory epithelial cell | 3.40e-30 | 6 |
olfactory epithelial cell | 3.40e-30 | 6 |
columnar/cuboidal epithelial cell | 3.64e-12 | 27 |
smooth muscle cell of the umbilical vein | 3.70e-11 | 2 |
neurecto-epithelial cell | 1.49e-09 | 20 |
aortic smooth muscle cell | 5.57e-09 | 10 |
preadipocyte of the breast | 5.18e-08 | 3 |
cardiac muscle cell | 6.78e-08 | 3 |
cardiac muscle myoblast | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 5.57e-09 | 10 |
arterial system smooth muscle | 5.57e-09 | 10 |
artery smooth muscle tissue | 5.57e-09 | 10 |
aorta smooth muscle tissue | 5.57e-09 | 10 |