FFCP PHASE1:Hg19::chr9:22238174..22238210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:22238174..22238210,+ | |||
|description=CAGE_peak_at_chr9:22238174..22238210,+ | |description=CAGE_peak_at_chr9:22238174..22238210,+ | ||
|id=chr9:22238174..22238210,+ | |id=chr9:22238174..22238210,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.08e-13!254;CL:0000548!1.18e-10!679;CL:0000004!1.18e-10!679;CL:0000255!1.18e-10!679;CL:0000012!2.38e-10!682;CL:0000220!6.57e-08!246;CL:0002321!1.13e-07!248;CL:0000063!1.20e-07!578 | |ontology_enrichment_celltype=CL:0000066!4.08e-13!254;CL:0000548!1.18e-10!679;CL:0000004!1.18e-10!679;CL:0000255!1.18e-10!679;CL:0000012!2.38e-10!682;CL:0000220!6.57e-08!246;CL:0002321!1.13e-07!248;CL:0000063!1.20e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000064;7.03e-12;3!CL:0000067;7.03e-12;3!CL:0005012;7.03e-12;3!CL:0002304;7.03e-12;3!CL:0002166;2.21e-11;3 | |ontology_enrichment_celltype_v019=CL:0000064;7.03e-12;3!CL:0000067;7.03e-12;3!CL:0005012;7.03e-12;3!CL:0002304;7.03e-12;3!CL:0002166;2.21e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.34e-12,3;CL:0000067,7.34e-12,3;CL:0005012,7.34e-12,3;CL:0002304,7.34e-12,3;CL:0002166,1.21e-11,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.97e-08!11;UBERON:0006876!2.97e-08!11;UBERON:0002203!3.22e-07!6;UBERON:0001768!3.22e-07!6 | |ontology_enrichment_uberon=UBERON:0002200!2.97e-08!11;UBERON:0006876!2.97e-08!11;UBERON:0002203!3.22e-07!6;UBERON:0001768!3.22e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;9.16e-15;4!UBERON:0001778;7.03e-12;3!UBERON:0001775;7.03e-12;3!UBERON:0007625;2.24e-11;11!UBERON:0002203;7.57e-10;6!UBERON:0001768;7.57e-10;6!UBERON:0002200;7.57e-10;6!UBERON:0001708;1.24e-08;4!UBERON:0008895;1.24e-08;4!UBERON:0006876;7.88e-08;11!UBERON:0010371;8.88e-08;31!UBERON:0002104;2.13e-07;21!UBERON:0011159;5.62e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000488;9.16e-15;4!UBERON:0001778;7.03e-12;3!UBERON:0001775;7.03e-12;3!UBERON:0007625;2.24e-11;11!UBERON:0002203;7.57e-10;6!UBERON:0001768;7.57e-10;6!UBERON:0002200;7.57e-10;6!UBERON:0001708;1.24e-08;4!UBERON:0008895;1.24e-08;4!UBERON:0006876;7.88e-08;11!UBERON:0010371;8.88e-08;31!UBERON:0002104;2.13e-07;21!UBERON:0011159;5.62e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.59e-14,4;UBERON:0001778,7.34e-12,3;UBERON:0001775,7.34e-12,3;UBERON:0007625,2.94e-11,11;UBERON:0002203,1.08e-09,6;UBERON:0001768,1.08e-09,6;UBERON:0002200,1.08e-09,6;UBERON:0001708,7.91e-09,4;UBERON:0008895,7.91e-09,4;UBERON:0000019,8.73e-08,20;UBERON:0000047,8.73e-08,20;UBERON:0010312,8.73e-08,20;UBERON:0004088,8.73e-08,20;UBERON:0010230,8.73e-08,20;UBERON:0003072,8.73e-08,20;UBERON:0004128,8.73e-08,20;UBERON:0003071,8.73e-08,20;UBERON:0006876,1.16e-07,11;UBERON:0000033,1.25e-07,56;UBERON:0000970,2.30e-07,21;UBERON:0002104,2.30e-07,21;UBERON:0011159,3.95e-07,5;UBERON:0001456,5.55e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.09220686065086,0.263766978228454,0,0,0.672325146451775,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0.85870796139317,0.684372125364421,0.87879847716362,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,1.26584954976354,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,4.34860158954712,5.5432349365641,4.91874799881506,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.379891534993739,1.05927344650575,0,0,0,0,1.97334038733728,0,0.942974704487816,0.326923806226917,1.05950199351452,0,1.17160715916898,0,0,0.149448680551801,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.773043412653187,1.09098448236334,1.43402297694502,0,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,0,0,1.02940686179115,0.439001141634502,0,0.100528972411631,0.648119116109707,0,0,0,0,4.57893907519705,0,0,0,0,0,0,0,0,9.3733833986777,3.86358894857377,1.84307626415102,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0.448524337381443,0.43596006883328,0.2933531432838,24.3030825624622,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,2.71295439353627,1.74306691720059,1.3996218765488,0,0,0,1.19812427745791,0,0,0.289562613335158,1.2328579353023,0.358121926479791,0,0,0,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,2.40756879782175,2.27407504055985,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,1.24053903909388,1.68808170616869,0,1.28139149255701,0,1.44768529029247,0,0,0.177561725313127,0.164254312027618,0,0,0,1.80455823272956,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,4.92021968549559,0.650756789328606,0,0.824125183365091,0.990113999047056,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,1.15699440752685,0.384380134730212,1.78657797492418,0,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0.75894634753143,0.699869440489966,0.48111056362756,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61928026063815,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,1.00177834520615,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,2.47313502185028,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,1.20258735531594,0.103688191397247,0,0,0,0,0,0.693373365065693,0,0,0.34823682632161,0,0.171986032471617,0.0967563312890851,0,0,0,0,0,3.01492234222852,0.397429223405979,0,0.586654148204409,0.240476460754601,0,0.39961921916426,0,0,0,8.64328787928898,0,0.235694034616795,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.13480708770837,5.21665652028169,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,12.2496390362512,0.179287339332845,2.68681276247223,0,0,0,0,0,0.326587360109409,0,0.492555124496034,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,1.62474530350739,4.85277176133273,0.570930667089935,9.1753669682287,0,0,0,0.701139929541673,0.554805861502613,0.189403005275089,0,0,0.686520205190771,0,0.621748802331122,0,0,0.449803112163605,0.465788870628778,0,1.86089200190596,0.521745061811734,1.05180326298053,0.761610424337591,0.406870733204662,0,0.751873899297419,0,1.19428766609585,0,0,0,1.26184898228651,0,1.07220795687463,0,0,0,3.67105056759701,0,0,4.82424909073156,0,0.192914038270915,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0.567515953566836,0.552317850755522,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,1.10057159113007,0.577628330751691,0.381382095467167,2.7614397042404,0,0.0752103283492573,0.20170506870352,0,0,0.327543835020193,1.03499260351932,0,0,0,0,0,0,0,0,1.02209942111676,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| ||
|short_description=p@chr9:22238174..22238210,+ | |short_description=p@chr9:22238174..22238210,+ | ||
}} | }} |
Latest revision as of 01:11, 1 August 2015
Short description: | p@chr9:22238174..22238210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:22238174..22238210, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.34e-12 | 3 |
ciliated epithelial cell | 7.34e-12 | 3 |
multi-ciliated epithelial cell | 7.34e-12 | 3 |
non-pigmented ciliary epithelial cell | 7.34e-12 | 3 |
epithelial cell of Malassez | 1.21e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 1.59e-14 | 4 |
ciliary epithelium | 7.34e-12 | 3 |
ciliary body | 7.34e-12 | 3 |
pigment epithelium of eye | 2.94e-11 | 11 |
vasculature of eye | 1.08e-09 | 6 |
uvea | 1.08e-09 | 6 |
vasculature of head | 1.08e-09 | 6 |
jaw skeleton | 7.91e-09 | 4 |
splanchnocranium | 7.91e-09 | 4 |
camera-type eye | 8.73e-08 | 20 |
simple eye | 8.73e-08 | 20 |
immature eye | 8.73e-08 | 20 |
ocular region | 8.73e-08 | 20 |
eyeball of camera-type eye | 8.73e-08 | 20 |
optic cup | 8.73e-08 | 20 |
optic vesicle | 8.73e-08 | 20 |
eye primordium | 8.73e-08 | 20 |
vasculature of organ | 1.16e-07 | 11 |
head | 1.25e-07 | 56 |
eye | 2.30e-07 | 21 |
visual system | 2.30e-07 | 21 |
primary subdivision of cranial skeletal system | 3.95e-07 | 5 |
face | 5.55e-07 | 22 |