FFCP PHASE1:Hg19::chr9:33719660..33719671,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:33719660..33719671,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr9:33719660..33719671,- | |description=CAGE_peak_at_chr9:33719660..33719671,- | ||
|id=chr9:33719660..33719671,- | |id=chr9:33719660..33719671,- | ||
|ontology_enrichment_celltype=CL:0000242!7.41e-67!2;CL:0002553!3.61e-34!1;CL:0000312!1.59e-27!5;CL:0000240!3.88e-23!6;CL:0000311!3.88e-23!6;CL:0000079!3.88e-23!6;CL:0000237!3.88e-23!6;CL:0000036!3.88e-23!6;CL:0000357!3.88e-23!6;CL:0000114!3.88e-23!6;CL:0000362!1.22e-17!8;CL:0002159!2.90e-11!13;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000082!5.94e-08!19;CL:0002274!7.49e-08!5;CL:0000457!7.49e-08!5;CL:0002191!7.49e-08!5;CL:0000097!7.49e-08!5;CL:0000831!7.49e-08!5;CL:0002028!7.49e-08!5;CL:0000035!1.17e-07!20 | |ontology_enrichment_celltype=CL:0000242!7.41e-67!2;CL:0002553!3.61e-34!1;CL:0000312!1.59e-27!5;CL:0000240!3.88e-23!6;CL:0000311!3.88e-23!6;CL:0000079!3.88e-23!6;CL:0000237!3.88e-23!6;CL:0000036!3.88e-23!6;CL:0000357!3.88e-23!6;CL:0000114!3.88e-23!6;CL:0000362!1.22e-17!8;CL:0002159!2.90e-11!13;CL:0000095!5.16e-08!17;CL:0000123!5.16e-08!17;CL:0000082!5.94e-08!19;CL:0002274!7.49e-08!5;CL:0000457!7.49e-08!5;CL:0002191!7.49e-08!5;CL:0000097!7.49e-08!5;CL:0000831!7.49e-08!5;CL:0002028!7.49e-08!5;CL:0000035!1.17e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.61e-131;2!CL:0000242;4.61e-131;2!CL:0002553;4.66e-66;1!CL:0000312;2.19e-53;5!CL:0000240;9.76e-45;6!CL:0000311;9.76e-45;6!CL:0000079;9.76e-45;6!CL:0000237;9.76e-45;6!CL:0000362;2.66e-30;9!CL:0002159;5.89e-20;14!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25!CL:0002077;1.20e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.61e-131,2;CL:0002553,4.66e-66,1;CL:0000312,2.19e-53,5;CL:0000240,9.76e-45,6;CL:0000311,9.76e-45,6;CL:0000079,9.76e-45,6;CL:0000237,9.76e-45,6;CL:0000036,9.76e-45,6;CL:0000357,9.76e-45,6;CL:0000114,9.76e-45,6;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0002077,6.54e-09,34;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;9.76e-45;6!CL:0000114;9.76e-45;6 | |||
|ontology_enrichment_disease=DOID:1324!8.10e-10!15;DOID:5409!1.44e-09!4;DOID:0050615!2.89e-09!16;DOID:305!3.00e-08!106 | |ontology_enrichment_disease=DOID:1324!8.10e-10!15;DOID:5409!1.44e-09!4;DOID:0050615!2.89e-09!16;DOID:305!3.00e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001003!1.57e-10!14;UBERON:0007376!1.57e-10!14;UBERON:0007383!1.57e-10!14;UBERON:0004802!5.94e-08!19;UBERON:0000115!5.94e-08!19;UBERON:0002048!5.40e-07!22;UBERON:0000117!5.40e-07!22;UBERON:0000171!5.40e-07!22;UBERON:0000170!5.40e-07!22;UBERON:0005597!5.40e-07!22;UBERON:0000118!5.40e-07!22 | |ontology_enrichment_uberon=UBERON:0001003!1.57e-10!14;UBERON:0007376!1.57e-10!14;UBERON:0007383!1.57e-10!14;UBERON:0004802!5.94e-08!19;UBERON:0000115!5.94e-08!19;UBERON:0002048!5.40e-07!22;UBERON:0000117!5.40e-07!22;UBERON:0000171!5.40e-07!22;UBERON:0000170!5.40e-07!22;UBERON:0005597!5.40e-07!22;UBERON:0000118!5.40e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.04e-18;15!UBERON:0007376;1.04e-18;15!UBERON:0010371;2.68e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.04e-18,15;UBERON:0007376,1.04e-18,15;UBERON:0007383,1.04e-18,15;UBERON:0002097,1.42e-07,41;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46 | |||
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|short_description=p@chr9:33719660..33719671,- | |short_description=p@chr9:33719660..33719671,- | ||
}} | }} |
Latest revision as of 01:29, 1 August 2015
Short description: | p@chr9:33719660..33719671, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:33719660..33719671, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.61e-131 | 2 |
lung fibroblast | 4.66e-66 | 1 |
keratinocyte | 2.19e-53 | 5 |
stratified squamous epithelial cell | 9.76e-45 | 6 |
keratin accumulating cell | 9.76e-45 | 6 |
stratified epithelial cell | 9.76e-45 | 6 |
keratinizing barrier epithelial cell | 9.76e-45 | 6 |
epithelial fate stem cell | 9.76e-45 | 6 |
stratified epithelial stem cell | 9.76e-45 | 6 |
surface ectodermal cell | 9.76e-45 | 6 |
epidermal cell | 2.66e-30 | 9 |
general ecto-epithelial cell | 5.89e-20 | 14 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
ecto-epithelial cell | 6.54e-09 | 34 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.04e-18 | 15 |
outer epithelium | 1.04e-18 | 15 |
enveloping layer of ectoderm | 1.04e-18 | 15 |
skin of body | 1.42e-07 | 41 |
integument | 7.30e-07 | 46 |
integumental system | 7.30e-07 | 46 |