FFCP PHASE1:Hg19::chr9:75489043..75489052,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000453787_5end | |association_with_transcript=-18bp_to_ENST00000453787_5end | ||
|cluster_id=chr9:75489043..75489052,- | |||
|description=CAGE_peak_1_at_ENST00000453787_5end | |description=CAGE_peak_1_at_ENST00000453787_5end | ||
|id=chr9:75489043..75489052,- | |id=chr9:75489043..75489052,- | ||
|ontology_enrichment_celltype=CL:0000064!2.80e-11!3;CL:0005012!2.80e-11!3;CL:0000067!2.80e-11!3;CL:0002304!2.80e-11!3 | |ontology_enrichment_celltype=CL:0000064!2.80e-11!3;CL:0005012!2.80e-11!3;CL:0000067!2.80e-11!3;CL:0002304!2.80e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000342;9.99e-30;1!CL:0002565;9.99e-30;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,9.99e-30,1;CL:0002565,9.99e-30,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4!UBERON:0007123;5.38e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.37e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000970!8.55e-16!20;UBERON:0002104!6.10e-15!21;UBERON:0007625!7.18e-15!11;UBERON:0000488!8.78e-15!4;UBERON:0000020!1.85e-13!23;UBERON:0000019!2.00e-13!19;UBERON:0000047!2.00e-13!19;UBERON:0004088!2.00e-13!19;UBERON:0003072!2.00e-13!19;UBERON:0003071!2.00e-13!19;UBERON:0004128!2.00e-13!19;UBERON:0001032!8.23e-13!24;UBERON:0004456!8.23e-13!24;UBERON:0001456!5.59e-12!21;UBERON:0003978!8.47e-12!3;UBERON:0009751!8.47e-12!3;UBERON:0000946!8.47e-12!3;UBERON:0002523!8.47e-12!3;UBERON:0005983!8.47e-12!3;UBERON:0002165!8.47e-12!3;UBERON:0002062!8.47e-12!3;UBERON:0007280!8.47e-12!3;UBERON:0001801!1.78e-11!14;UBERON:0001778!2.80e-11!3;UBERON:0001775!2.80e-11!3;UBERON:0002203!7.36e-10!6;UBERON:0001768!7.36e-10!6;UBERON:0002342!1.30e-08!14;UBERON:0005062!1.30e-08!14;UBERON:0002133!1.59e-08!2;UBERON:0005085!3.34e-08!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;9.99e-30;1!UBERON:0001769;9.99e-30;1!UBERON:0002135;2.73e-29;1!UBERON:0002133;2.21e-15;2!UBERON:0002369;1.04e-10;3!UBERON:0001235;1.04e-10;3!UBERON:0003978;1.04e-10;3!UBERON:0000946;1.04e-10;3!UBERON:0006858;1.04e-10;3!UBERON:0000488;1.82e-08;4!UBERON:0002046;5.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,9.99e-30,1;UBERON:0001769,9.99e-30,1;UBERON:0002135,2.37e-29,1;UBERON:0002133,2.05e-15,2;UBERON:0002369,8.99e-11,3;UBERON:0001235,8.99e-11,3;UBERON:0006858,8.99e-11,3;UBERON:0003978,9.90e-11,3;UBERON:0009751,9.90e-11,3;UBERON:0000946,9.90e-11,3;UBERON:0002523,9.90e-11,3;UBERON:0005983,9.90e-11,3;UBERON:0002165,9.90e-11,3;UBERON:0002062,9.90e-11,3;UBERON:0007280,9.90e-11,3;UBERON:0000488,1.82e-08,4;UBERON:0002046,5.38e-07,5;UBERON:0004117,5.38e-07,5;UBERON:0007689,5.38e-07,5;UBERON:0007123,5.38e-07,5;UBERON:0003091,5.38e-07,5 | |||
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| ||
|short_description=p1@ENST00000453787 | |short_description=p1@ENST00000453787 | ||
}} | }} |
Latest revision as of 02:39, 1 August 2015
Short description: | p1@ENST00000453787 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000453787_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000453787_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 9.99e-30 | 1 |
iris pigment epithelial cell | 9.99e-30 | 1 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 9.99e-30 | 1 |
iris | 9.99e-30 | 1 |
mitral valve | 2.37e-29 | 1 |
atrioventricular valve | 2.05e-15 | 2 |
adrenal gland | 8.99e-11 | 3 |
adrenal cortex | 8.99e-11 | 3 |
adrenal/interrenal gland | 8.99e-11 | 3 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |
atypical epithelium | 1.82e-08 | 4 |
thyroid gland | 5.38e-07 | 5 |
pharyngeal pouch | 5.38e-07 | 5 |
thyroid diverticulum | 5.38e-07 | 5 |
pharyngeal pouch 2 | 5.38e-07 | 5 |
thyroid primordium | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.37e-15 | 2 |