FFCP PHASE1:Hg19::chrX:106142727..106142730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:106142727..106142730,- | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_at_chrX:106142727..106142730,- | |description=CAGE_peak_at_chrX:106142727..106142730,- | ||
|id=chrX:106142727..106142730,- | |id=chrX:106142727..106142730,- | ||
|ontology_enrichment_celltype=CL:0000064!4.31e-15!3;CL:0005012!4.31e-15!3;CL:0000067!4.31e-15!3;CL:0002304!4.31e-15!3 | |ontology_enrichment_celltype=CL:0000064!4.31e-15!3;CL:0005012!4.31e-15!3;CL:0000067!4.31e-15!3;CL:0002304!4.31e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.68e-66;3!CL:0000067;4.68e-66;3!CL:0005012;4.68e-66;3!CL:0002304;4.68e-66;3!CL:0000710;6.00e-11;20!CL:0002149;1.44e-09;6!CL:0002255;1.44e-09;6!CL:0000075;2.22e-08;27!CL:0002077;3.69e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.53e-66,3;CL:0000067,6.53e-66,3;CL:0005012,6.53e-66,3;CL:0002304,6.53e-66,3;CL:0000710,6.30e-11,20;CL:0002149,1.32e-09,6;CL:0002255,1.32e-09,6;CL:0000075,2.30e-08,27;CL:0002077,7.59e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4231!2.67e-10!2;DOID:1907!2.67e-10!2 | |ontology_enrichment_disease=DOID:4231!2.67e-10!2;DOID:1907!2.67e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001778!4.31e-15!3;UBERON:0001775!4.31e-15!3;UBERON:0000488!1.96e-11!4;UBERON:0002203!9.36e-08!6;UBERON:0001768!9.36e-08!6 | |ontology_enrichment_uberon=UBERON:0001778!4.31e-15!3;UBERON:0001775!4.31e-15!3;UBERON:0000488!1.96e-11!4;UBERON:0002203!9.36e-08!6;UBERON:0001768!9.36e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.68e-66;3!UBERON:0001775;4.68e-66;3!UBERON:0000488;6.60e-50;4!UBERON:0002203;9.87e-34;6!UBERON:0001768;9.87e-34;6!UBERON:0002200;9.87e-34;6!UBERON:0007625;5.63e-19;11!UBERON:0006876;5.63e-19;11!UBERON:0001801;3.66e-15;14!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0000970;6.00e-11;20!UBERON:0002104;1.77e-10;21!UBERON:0001456;1.77e-10;21!UBERON:0000020;1.17e-09;23!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24!UBERON:0010371;1.21e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,6.53e-66,3;UBERON:0001775,6.53e-66,3;UBERON:0000488,8.47e-50,4;UBERON:0002203,1.17e-33,6;UBERON:0001768,1.17e-33,6;UBERON:0002200,1.17e-33,6;UBERON:0007625,6.17e-19,11;UBERON:0006876,6.17e-19,11;UBERON:0001801,3.93e-15,14;UBERON:0000019,6.30e-11,20;UBERON:0000047,6.30e-11,20;UBERON:0010312,6.30e-11,20;UBERON:0004088,6.30e-11,20;UBERON:0010230,6.30e-11,20;UBERON:0003072,6.30e-11,20;UBERON:0004128,6.30e-11,20;UBERON:0003071,6.30e-11,20;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0001456,4.96e-10,22;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0005085,2.05e-07,31 | |||
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| ||
|short_description=p@chrX:106142727..106142730,- | |short_description=p@chrX:106142727..106142730,- | ||
}} | }} |
Latest revision as of 04:49, 1 August 2015
Short description: | p@chrX:106142727..106142730, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:106142727..106142730, - |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.53e-66 | 3 |
ciliated epithelial cell | 6.53e-66 | 3 |
multi-ciliated epithelial cell | 6.53e-66 | 3 |
non-pigmented ciliary epithelial cell | 6.53e-66 | 3 |
neurecto-epithelial cell | 6.30e-11 | 20 |
epithelial cell of uterus | 1.32e-09 | 6 |
stromal cell of endometrium | 1.32e-09 | 6 |
columnar/cuboidal epithelial cell | 2.30e-08 | 27 |
ecto-epithelial cell | 7.59e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 6.53e-66 | 3 |
ciliary body | 6.53e-66 | 3 |
atypical epithelium | 8.47e-50 | 4 |
vasculature of eye | 1.17e-33 | 6 |
uvea | 1.17e-33 | 6 |
vasculature of head | 1.17e-33 | 6 |
pigment epithelium of eye | 6.17e-19 | 11 |
vasculature of organ | 6.17e-19 | 11 |
anterior segment of eyeball | 3.93e-15 | 14 |
camera-type eye | 6.30e-11 | 20 |
simple eye | 6.30e-11 | 20 |
immature eye | 6.30e-11 | 20 |
ocular region | 6.30e-11 | 20 |
eyeball of camera-type eye | 6.30e-11 | 20 |
optic cup | 6.30e-11 | 20 |
optic vesicle | 6.30e-11 | 20 |
eye primordium | 6.30e-11 | 20 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
face | 4.96e-10 | 22 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
ectodermal placode | 2.05e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.32e-09 | 6 |