FFCP PHASE1:Hg19::chrX:3240495..3240508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_BC172854_5end | |association_with_transcript=9bp_to_BC172854_5end | ||
|cluster_id=chrX:3240495..3240508,- | |||
|coexpression_cluster_id=C551 | |coexpression_cluster_id=C551 | ||
|description=CAGE_peak_1_at_BC172854_5end | |description=CAGE_peak_1_at_BC172854_5end | ||
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|ontology_enrichment_celltype=CL:0000057!3.75e-10!75;CL:0002620!6.47e-08!23 | |ontology_enrichment_celltype=CL:0000057!3.75e-10!75;CL:0002620!6.47e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.99e-17;23!CL:0002580;9.37e-10;3!CL:0000135;5.24e-09;3!CL:0000388;5.24e-09;3 | |ontology_enrichment_celltype_v019=CL:0002620;2.99e-17;23!CL:0002580;9.37e-10;3!CL:0000135;5.24e-09;3!CL:0000388;5.24e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.06e-17,23;CL:0000057,6.09e-12,76;CL:0002580,9.42e-10,3;CL:0000135,3.44e-09,3;CL:0000388,3.44e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.96e-08!14 | |ontology_enrichment_disease=DOID:2394!2.96e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.69e-15;14!DOID:17;1.52e-13;5!DOID:450;1.52e-13;5!DOID:66;1.52e-13;5!DOID:423;1.52e-13;5!DOID:0080000;1.52e-13;5!DOID:11722;1.52e-13;5!DOID:193;3.24e-09;29!DOID:120;2.33e-08;27 | |ontology_enrichment_disease_v019=DOID:2394;7.69e-15;14!DOID:17;1.52e-13;5!DOID:450;1.52e-13;5!DOID:66;1.52e-13;5!DOID:423;1.52e-13;5!DOID:0080000;1.52e-13;5!DOID:11722;1.52e-13;5!DOID:193;3.24e-09;29!DOID:120;2.33e-08;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-14,14;DOID:17,7.83e-14,5;DOID:450,7.83e-14,5;DOID:66,7.83e-14,5;DOID:423,7.83e-14,5;DOID:0080000,7.83e-14,5;DOID:11722,7.83e-14,5;DOID:193,3.83e-09,29;DOID:120,2.97e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.73e-10!95 | |ontology_enrichment_uberon=UBERON:0003102!5.73e-10!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.24e-09;3!UBERON:0000043;5.24e-09;3!UBERON:0007845;5.24e-09;3!UBERON:0002097;1.67e-08;41!UBERON:0002199;2.25e-07;46!UBERON:0002416;2.25e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0007846;5.24e-09;3!UBERON:0000043;5.24e-09;3!UBERON:0007845;5.24e-09;3!UBERON:0002097;1.67e-08;41!UBERON:0002199;2.25e-07;46!UBERON:0002416;2.25e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.35e-11,41;UBERON:0002199,2.13e-11,46;UBERON:0002416,2.13e-11,46;UBERON:0007846,3.44e-09,3;UBERON:0000043,3.44e-09,3;UBERON:0007845,3.44e-09,3;UBERON:0003102,1.50e-08,99 | |||
|phase1_expression=0.54503513781167,5.99481466894753,0.704772020479856,2.00146596706261,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.984968464614303,0.612002073732759,1.25381888591235,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0.869079113764942,0,2.43317435151318,0.567208902984407,1.33037638477538,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,2.71993622206413,0,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.45071417671979,0,6.81680615617675,4.91181994282705,1.69545520927649,1.50045548042201,1.95799805553034,3.09168648054755,1.8611685633159,0.168776332241266,1.36411807225678,6.05841058185875,2.66944706062668,2.10139873864455,9.58525899794859,1.30977727695932,0.847802961552438,0,0.272746120590835,0,0,0,0.232387885739037,0.207322110030741,0,0,0,6.43240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.821860859650752,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.06834745212444,0,0,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,5.42590878707255,2.61460037580088,2.29937879718731,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0.623912584592421,0.713715955188647,1.10391690523754,0.117141414992713,0,0,0,0,0,1.21637060255316,0.195801157462741,0.686286847621712,0,0,0,0,0,0.30239029332968,3.47350930946288,3.52962538562544,11.7877239661891,0.896974044789907,2.04682899626681,0.64341568457443,0,0.308419387605311,1.59805552781814,0.0821271560138091,0,0,0,1.80455823272956,0,0.114814448164607,0.364182336013434,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0.103041011647722,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0.712256285173899,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,2.96365403663912,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,3.99308912729002,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,1.56262495439963,0,0,0,0,0,0,0,1.39423744278603,1.23120413606075,7.17834951836108,0,0,0.108647371922008,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0,1.17330829640882,0,0,0.19980960958213,0,0,0,0,0,1.17847017308398,0.407712618220842,0.313808538937,0,0.866851769704557,0,0,0,1.71906176567983,0,2.79282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.472834243795189,0,0,0,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0,0.681552087141687,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,1.63599316893057,0.554805861502613,0,0.50313580350515,0.889811221596536,0,0.453692771289717,0,0.443565449968902,1.11507737014592,0.449803112163605,2.17368139626763,0,3.98762571836992,1.04349012362347,30.3520370174381,5.71207818253193,2.84809513243263,0.727394636810238,4.72606450986949,0,2.3885753321917,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0,0.617602894321944,0.877136198314828,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,4.93746321166957,0,0,0,0,0,0,0,0,0,0,0,1.28400018965175,0,0.381382095467167,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0,0.295712172434091,0,0,0,0,0,0.548257766857182,2.48105589194647,0,0.766574565837572,0,0,0,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,1.82631744101899,0,0,0.142953088353313,0.47404083519818,0,0,4.81026818838152,0,2.3900586793153,0,0,0,0,2.9637093513365,0.68732060563215,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0.735444965261716,0,0,0,0.8453114551668,0,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| ||
|short_description=p1@BC172854 | |short_description=p1@BC172854 | ||
}} | }} |
Latest revision as of 07:48, 1 August 2015
Short description: | p1@BC172854 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC172854_5end |
Coexpression cluster: | C551_mesenchymal_cholangiocellular_Fibroblast_Mesothelial_Preadipocyte_cervical_Chondrocyte |
Association with transcript: | 9bp_to_BC172854_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.06e-17 | 23 |
fibroblast | 6.09e-12 | 76 |
preadipocyte of the breast | 9.42e-10 | 3 |
fibrocyte | 3.44e-09 | 3 |
tendon cell | 3.44e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.35e-11 | 41 |
integument | 2.13e-11 | 46 |
integumental system | 2.13e-11 | 46 |
dense regular connective tissue | 3.44e-09 | 3 |
tendon | 3.44e-09 | 3 |
regular connective tissue | 3.44e-09 | 3 |
surface structure | 1.50e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-14 | 14 |
musculoskeletal system disease | 7.83e-14 | 5 |
myotonic disease | 7.83e-14 | 5 |
muscle tissue disease | 7.83e-14 | 5 |
myopathy | 7.83e-14 | 5 |
muscular disease | 7.83e-14 | 5 |
myotonic dystrophy | 7.83e-14 | 5 |
reproductive organ cancer | 3.83e-09 | 29 |
female reproductive organ cancer | 2.97e-08 | 27 |