FFCP PHASE1:Hg19::chrX:80937955..80937971,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:80937955..80937971,+ | |||
|coexpression_cluster_id=C984 | |||
|description=CAGE_peak_at_chrX:80937955..80937971,+ | |||
|id=chrX:80937955..80937971,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.10e-14!3;CL:0000197!6.02e-13!6;CL:0000098!6.02e-13!6;CL:0002167!6.02e-13!6;CL:0000737!9.89e-11!4;CL:0002588!1.90e-09!2;CL:0000710!1.19e-07!20;CL:0000075!2.31e-07!27;CL:0002580!6.37e-07!3;CL:0000746!6.56e-07!3;CL:0000513!6.56e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000197;4.44e-24;6!CL:0000098;4.44e-24;6!CL:0002167;4.44e-24;6!CL:0002541;9.65e-13;3!CL:0000228;7.22e-10;1!CL:0002372;7.22e-10;1!CL:0000737;1.81e-09;4!CL:0002539;2.14e-08;10!CL:0000075;4.56e-08;27!CL:0000710;2.39e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,4.58e-24,6;CL:0000098,4.58e-24,6;CL:0002167,4.58e-24,6;CL:0002541,1.26e-12,3;CL:0000228,7.55e-10,1;CL:0002372,7.55e-10,1;CL:0000737,1.66e-09,4;CL:0002539,1.86e-08,10;CL:0000075,4.50e-08,27;CL:0000710,2.41e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.99e-11!14;DOID:120!4.23e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.10e-14!3;UBERON:0000920!2.10e-14!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.65e-13;3!UBERON:0000920;9.65e-13;3!UBERON:0005631;1.70e-08;10!UBERON:0000158;1.70e-08;10!UBERON:0004237;2.14e-08;10!UBERON:0004695;2.14e-08;10!UBERON:0002111;2.14e-08;10!UBERON:0004178;2.14e-08;10!UBERON:0002118;9.54e-08;5!UBERON:0000947;6.97e-07;21!UBERON:0010191;6.97e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.26e-12,3;UBERON:0004237,1.86e-08,10;UBERON:0004695,1.86e-08,10;UBERON:0002111,1.86e-08,10;UBERON:0004178,1.86e-08,10;UBERON:0002118,1.09e-07,5;UBERON:0000947,6.45e-07,21;UBERON:0010191,6.45e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,2.19093027116212,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69359477496841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89451363499672,0,0,0,1.45481451136931,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52631302506568,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.57535895367776,5.70972764150918,3.46945313074656,4.4513737697231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,9.51464234385987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.687743287091848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,2.62618933211459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7600463892768,0.915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,1.77962244319307,0,0,0,0,0,0.449803112163605,0,1.65882483136342,0,0.521745061811734,0,0.761610424337591,0,0,0,1.39210127963548,1.19428766609585,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:80937955..80937971,+ | |||
}} |
Latest revision as of 09:45, 1 August 2015
Short description: | p@chrX:80937955..80937971, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:80937955..80937971, + |
Coexpression cluster: | C984_chorionic_Preadipocyte_Fibroblast_mesenchymal_Lens_amniotic_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 4.58e-24 | 6 |
sensory epithelial cell | 4.58e-24 | 6 |
olfactory epithelial cell | 4.58e-24 | 6 |
chorionic membrane mesenchymal stem cell | 1.26e-12 | 3 |
multinucleate cell | 7.55e-10 | 1 |
myotube | 7.55e-10 | 1 |
striated muscle cell | 1.66e-09 | 4 |
aortic smooth muscle cell | 1.86e-08 | 10 |
columnar/cuboidal epithelial cell | 4.50e-08 | 27 |
neurecto-epithelial cell | 2.41e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.26e-12 | 3 |
blood vessel smooth muscle | 1.86e-08 | 10 |
arterial system smooth muscle | 1.86e-08 | 10 |
artery smooth muscle tissue | 1.86e-08 | 10 |
aorta smooth muscle tissue | 1.86e-08 | 10 |
right ovary | 1.09e-07 | 5 |
aorta | 6.45e-07 | 21 |
aortic system | 6.45e-07 | 21 |