FFCP PHASE1:Mm9::chr10:107880104..107880107,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:107880104..107880107,- | |||
|description=CAGE_peak_at_chr10:107880104..107880107,- | |description=CAGE_peak_at_chr10:107880104..107880107,- | ||
|id=chr10:107880104..107880107,- | |id=chr10:107880104..107880107,- | ||
|ontology_enrichment_celltype=CL:0000239!7.77e-14!6;CL:0000677!7.77e-14!6;CL:0000212!7.77e-14!6;CL:0000584!7.77e-14!6;CL:0000075!9.97e-12!7;CL:0002563!1.08e-11!9;CL:0002251!1.08e-11!9;CL:0000066!5.77e-09!25;CL:0000473!5.65e-08!3;CL:0000627!5.65e-08!3;CL:0000682!5.65e-08!3 | |ontology_enrichment_celltype=CL:0000239!7.77e-14!6;CL:0000677!7.77e-14!6;CL:0000212!7.77e-14!6;CL:0000584!7.77e-14!6;CL:0000075!9.97e-12!7;CL:0002563!1.08e-11!9;CL:0002251!1.08e-11!9;CL:0000066!5.77e-09!25;CL:0000473!5.65e-08!3;CL:0000627!5.65e-08!3;CL:0000682!5.65e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.84e-22,6;CL:0000677,1.84e-22,6;CL:0000584,1.84e-22,6;CL:0000075,3.00e-19,7;CL:0000682,4.51e-17,3;CL:0000066,2.39e-16,25;CL:0002563,5.87e-15,9;CL:0002251,5.87e-15,9;CL:0000223,3.06e-09,20;CL:0002076,6.37e-09,15;CL:0000473,1.32e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.50e-19!15;UBERON:0001242!3.28e-15!13;UBERON:0000060!3.28e-15!13;UBERON:0001262!3.28e-15!13;UBERON:0004786!3.28e-15!13;UBERON:0004923!1.22e-14!24;UBERON:0003350!1.08e-11!9;UBERON:0004808!1.08e-11!9;UBERON:0001277!1.08e-11!9;UBERON:0000160!2.06e-10!43;UBERON:0004119!8.76e-10!130;UBERON:0000925!8.76e-10!130;UBERON:0006595!8.76e-10!130;UBERON:0000485!2.45e-09!11;UBERON:0001007!3.15e-09!128;UBERON:0001555!3.15e-09!128;UBERON:0007026!3.15e-09!128;UBERON:0004921!1.08e-07!126;UBERON:0004185!1.08e-07!126;UBERON:0000064!3.25e-07!99 | |ontology_enrichment_uberon=UBERON:0000344!4.50e-19!15;UBERON:0001242!3.28e-15!13;UBERON:0000060!3.28e-15!13;UBERON:0001262!3.28e-15!13;UBERON:0004786!3.28e-15!13;UBERON:0004923!1.22e-14!24;UBERON:0003350!1.08e-11!9;UBERON:0004808!1.08e-11!9;UBERON:0001277!1.08e-11!9;UBERON:0000160!2.06e-10!43;UBERON:0004119!8.76e-10!130;UBERON:0000925!8.76e-10!130;UBERON:0006595!8.76e-10!130;UBERON:0000485!2.45e-09!11;UBERON:0001007!3.15e-09!128;UBERON:0001555!3.15e-09!128;UBERON:0007026!3.15e-09!128;UBERON:0004921!1.08e-07!126;UBERON:0004185!1.08e-07!126;UBERON:0000064!3.25e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.73e-22,15;UBERON:0003350,5.87e-15,9;UBERON:0004808,5.87e-15,9;UBERON:0001277,5.87e-15,9;UBERON:0001242,2.28e-14,13;UBERON:0001262,2.28e-14,13;UBERON:0004786,2.28e-14,13;UBERON:0004923,2.92e-13,24;UBERON:0000485,3.21e-12,11;UBERON:0001962,1.67e-11,2;UBERON:0001961,1.67e-11,2;UBERON:0001744,1.67e-11,2;UBERON:0000160,5.56e-10,31;UBERON:0002465,5.88e-08,3 | |||
|phase1_expression=0,33.1526637257393,28.2099528421512,0.90739263392049,2.00358291978539,13.0945832091274,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.39969691173627,7.79991555628378,12.0588712464154,16.7997178502039,14.8675150553263,0,0.252030129759931,1.33038306393183,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0,0.898819408654221,2.16138049874694,0.995706366271836,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,1.15719246865209,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,2.80306630000516,0,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0.38983152295901,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,33.1526637257393,28.2099528421512,0.90739263392049,2.00358291978539,13.0945832091274,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.39969691173627,7.79991555628378,12.0588712464154,16.7997178502039,14.8675150553263,0,0.252030129759931,1.33038306393183,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0,0.898819408654221,2.16138049874694,0.995706366271836,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,1.15719246865209,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,2.80306630000516,0,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0.38983152295901,0.384847366561318,0.701261413089414,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:107880104..107880107,- | |short_description=p@chr10:107880104..107880107,- | ||
}} | }} |
Latest revision as of 20:23, 3 August 2015
Short description: | p@chr10:107880104..107880107, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:107880104..107880107, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.84e-22 | 6 |
gut absorptive cell | 1.84e-22 | 6 |
enterocyte | 1.84e-22 | 6 |
columnar/cuboidal epithelial cell | 3.00e-19 | 7 |
M cell of gut | 4.51e-17 | 3 |
epithelial cell | 2.39e-16 | 25 |
intestinal epithelial cell | 5.87e-15 | 9 |
epithelial cell of alimentary canal | 5.87e-15 | 9 |
endodermal cell | 3.06e-09 | 20 |
endo-epithelial cell | 6.37e-09 | 15 |
defensive cell | 1.32e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.73e-22 | 15 |
epithelium of mucosa | 5.87e-15 | 9 |
gastrointestinal system epithelium | 5.87e-15 | 9 |
intestinal epithelium | 5.87e-15 | 9 |
intestinal mucosa | 2.28e-14 | 13 |
wall of intestine | 2.28e-14 | 13 |
gastrointestinal system mucosa | 2.28e-14 | 13 |
organ component layer | 2.92e-13 | 24 |
simple columnar epithelium | 3.21e-12 | 11 |
gut-associated lymphoid tissue | 1.67e-11 | 2 |
mucosa-associated lymphoid tissue | 1.67e-11 | 2 |
lymphoid tissue | 1.67e-11 | 2 |
intestine | 5.56e-10 | 31 |
lymphoid system | 5.88e-08 | 3 |