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FFCP PHASE1:Mm9::chr11:86497263..86497349,-: Difference between revisions

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{{FFCP|EntrezGene=75909|HGNC=|MCL_coexpression_id=12|UniProt=Q99KU0|association_with_transcript=0bp_to_ENSMUST00000018315,ENSMUST00000139040,NM_029478,uc007ksv.1,uc007ksw.1_5end|description=CAGE_peak_1_at_Vmp1_5end|id=chr11:86497263..86497349,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.56e-13!43;UBERON:0005409!7.50e-13!59;UBERON:0000481!5.91e-11!230;UBERON:0004119!1.60e-09!130;UBERON:0000925!1.60e-09!130;UBERON:0006595!1.60e-09!130;UBERON:0001007!4.94e-09!128;UBERON:0001555!4.94e-09!128;UBERON:0007026!4.94e-09!128;UBERON:0002100!5.14e-09!98;UBERON:0005177!2.07e-08!85;UBERON:0004921!2.90e-08!126;UBERON:0004185!2.90e-08!126;UBERON:0005172!3.38e-08!49;UBERON:0005173!3.38e-08!49;UBERON:0002417!3.38e-08!49;UBERON:0000916!3.38e-08!49;UBERON:0004923!7.28e-08!24;UBERON:0000344!1.70e-07!15;UBERON:0000480!2.66e-07!308;UBERON:0000467!2.66e-07!308;UBERON:0009569!7.03e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.70e-13,31;UBERON:0005409,1.48e-11,47;UBERON:0002100,2.40e-08,90;UBERON:0005172,3.38e-08,49;UBERON:0005173,3.38e-08,49;UBERON:0002417,3.38e-08,49;UBERON:0000916,3.38e-08,49;UBERON:0005177,5.58e-08,79;UBERON:0004119,6.86e-08,118;UBERON:0000925,6.86e-08,118;UBERON:0006595,6.86e-08,118;UBERON:0004923,7.28e-08,24;UBERON:0000344,1.70e-07,15;UBERON:0001007,1.91e-07,116;UBERON:0001555,1.91e-07,116;UBERON:0007026,1.91e-07,116;UBERON:0003104,2.08e-07,61;UBERON:0009142,2.08e-07,61;UBERON:0009569,7.03e-07,66;UBERON:0004921,9.55e-07,114|phase1_expression=43.560486412504,217.062703551683,186.09468891032,167.262708852677,169.803652451812,68.3268636681392,73.8215944281861,26.0829113351984,21.11830832275,20.5976783163354,54.7897498321616,47.1453459662438,26.8785145991993,24.7399738845763,35.6427445142759,70.0564425168798,73.4539972034554,23.5019313191887,29.4796032252338,29.2828859740641,42.691731655837,30.4823220186718,43.3591649970633,145.273119896413,164.027635963027,218.208146363708,185.227658348402,163.758136841276,249.500749746219,208.932977570983,177.162678013588,26.6712882853045,28.2929802288902,31.6963362030877,41.8834848639348,54.5249636775855,36.7504841272264,29.2972141515835,22.6587249911902,36.1231383341921,20.5881020810855,21.8574555186703,22.8189865924642,105.375636645558,108.371939473661,152.527351046357,13.3006528539167,22.0205407944251,28.7788899382158,27.2201858703997,20.4380175573029,27.3129872293446,27.0129995752956,15.9579671242496,17.4768775554081,38.3316559693561,39.8281481514872,44.34779993586,23.4687094597133,25.9205579843296,27.2547503507657,17.6199156675949,10.6715375533337,19.7977937801908,13.8441290759376,17.7620028736525,9.58720353658895,11.5265491596466,21.2563705232379,20.2508907497536,24.6080204781117,47.1324124266276,46.1615250588872,22.4158162563366,27.6993411242703,18.3843757322004,36.3382407297983,70.2280359468532,61.7498263690099,24.6627358055462,30.373897676,30.2129754922921,73.7043117363646,69.2198010338966,56.8409481729734,33.8822873294718,41.430159112539,41.567076419042,57.7033593198862,39.5239259358488,19.1310562543107,101.530017483804,61.1974200336975,108.480341519201,131.904612741877,89.1573505323698,73.3119873087745,40.3919864509997,29.615604524727,29.3271846843582,48.5909798229548,35.931413676009,22.9324715735981,35.5533351576666,36.1540038488728,31.9233430498624,50.0469200564635,80.6138190816563,33.4029869904852,40.673146103762,34.1766093729288,35.3179954842084,50.5047938990768,60.4397788616016,47.9761925113676,52.4029685844747,105.799446190312,34.5592463038589,30.9613693182456,33.3239710891663,41.518205470554,46.5480243009813,85.7402101603362,52.1149818680554,75.8197078664707,162.215230057456,28.515999632409,32.9946502046374,28.2095904102204,69.3530660444329,81.4351073017155,38.4502317465365,80.3068359288317,101.007605645481,70.0245710165718,91.5040723702153,31.2646847020471,37.0732772418077,45.4900965180614,208.547879183496,31.2289063110489,35.6348261871883,31.1507484563254,34.360698466543,27.0785266622285,37.7935474840307,33.170410494144,86.6656291975703,27.1615671095381,28.5550181053407,25.1610107554447,24.9883134967435,30.5851974148158,33.0839558196058,31.6904490068233,37.0203736282397,40.0261516768544,29.3376614110775,32.9629659298887,27.7548535197573,26.0323926579017,34.0317296161318,28.4093682702252,31.8758055430794,31.7790252547999,34.4150238230604,24.681152928765,29.7751623036282,35.2158078814848,39.564358843062,29.6711842937832,40.4973965168171,49.8378761710685,46.9722465661301,64.5590142091871,38.6921342546109,389.233326354914,151.530174698211,31.5666610792146,29.9585306699966,33.7632748663884,84.1020297679338,119.63938758854,190.986528617009,159.9162937405,245.236743584052,214.13759789783,228.998899319365,192.039625812333,118.644161942357,197.98245368522,169.668364812721,39.2612554972879,47.0703871952083,50.7184810528862,64.7611222548099,67.6894180215014,72.4503019466991,95.6768806690013,72.1813623620255,97.182212533811,91.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75909
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=uniprot:Q99KU0
|association_with_transcript=0bp_to_ENSMUST00000018315,ENSMUST00000139040,NM_029478,uc007ksv.1,uc007ksw.1_5end
|cluster_id=chr11:86497263..86497349,-
|description=CAGE_peak_1_at_Vmp1_5end
|id=chr11:86497263..86497349,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.56e-13!43;UBERON:0005409!7.50e-13!59;UBERON:0000481!5.91e-11!230;UBERON:0004119!1.60e-09!130;UBERON:0000925!1.60e-09!130;UBERON:0006595!1.60e-09!130;UBERON:0001007!4.94e-09!128;UBERON:0001555!4.94e-09!128;UBERON:0007026!4.94e-09!128;UBERON:0002100!5.14e-09!98;UBERON:0005177!2.07e-08!85;UBERON:0004921!2.90e-08!126;UBERON:0004185!2.90e-08!126;UBERON:0005172!3.38e-08!49;UBERON:0005173!3.38e-08!49;UBERON:0002417!3.38e-08!49;UBERON:0000916!3.38e-08!49;UBERON:0004923!7.28e-08!24;UBERON:0000344!1.70e-07!15;UBERON:0000480!2.66e-07!308;UBERON:0000467!2.66e-07!308;UBERON:0009569!7.03e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.70e-13,31;UBERON:0005409,1.48e-11,47;UBERON:0002100,2.40e-08,90;UBERON:0005172,3.38e-08,49;UBERON:0005173,3.38e-08,49;UBERON:0002417,3.38e-08,49;UBERON:0000916,3.38e-08,49;UBERON:0005177,5.58e-08,79;UBERON:0004119,6.86e-08,118;UBERON:0000925,6.86e-08,118;UBERON:0006595,6.86e-08,118;UBERON:0004923,7.28e-08,24;UBERON:0000344,1.70e-07,15;UBERON:0001007,1.91e-07,116;UBERON:0001555,1.91e-07,116;UBERON:0007026,1.91e-07,116;UBERON:0003104,2.08e-07,61;UBERON:0009142,2.08e-07,61;UBERON:0009569,7.03e-07,66;UBERON:0004921,9.55e-07,114
|phase1_expression=43.560486412504,217.062703551683,186.09468891032,167.262708852677,169.803652451812,68.3268636681392,73.8215944281861,26.0829113351984,21.11830832275,20.5976783163354,54.7897498321616,47.1453459662438,26.8785145991993,24.7399738845763,35.6427445142759,70.0564425168798,73.4539972034554,23.5019313191887,29.4796032252338,29.2828859740641,42.691731655837,30.4823220186718,43.3591649970633,145.273119896413,164.027635963027,218.208146363708,185.227658348402,163.758136841276,249.500749746219,208.932977570983,177.162678013588,26.6712882853045,28.2929802288902,31.6963362030877,41.8834848639348,54.5249636775855,36.7504841272264,29.2972141515835,22.6587249911902,36.1231383341921,20.5881020810855,21.8574555186703,22.8189865924642,105.375636645558,108.371939473661,152.527351046357,13.3006528539167,22.0205407944251,28.7788899382158,27.2201858703997,20.4380175573029,27.3129872293446,27.0129995752956,15.9579671242496,17.4768775554081,38.3316559693561,39.8281481514872,44.34779993586,23.4687094597133,25.9205579843296,27.2547503507657,17.6199156675949,10.6715375533337,19.7977937801908,13.8441290759376,17.7620028736525,9.58720353658895,11.5265491596466,21.2563705232379,20.2508907497536,24.6080204781117,47.1324124266276,46.1615250588872,22.4158162563366,27.6993411242703,18.3843757322004,36.3382407297983,70.2280359468532,61.7498263690099,24.6627358055462,30.373897676,30.2129754922921,73.7043117363646,69.2198010338966,56.8409481729734,33.8822873294718,41.430159112539,41.567076419042,57.7033593198862,39.5239259358488,19.1310562543107,101.530017483804,61.1974200336975,108.480341519201,131.904612741877,89.1573505323698,73.3119873087745,40.3919864509997,29.615604524727,29.3271846843582,48.5909798229548,35.931413676009,22.9324715735981,35.5533351576666,36.1540038488728,31.9233430498624,50.0469200564635,80.6138190816563,33.4029869904852,40.673146103762,34.1766093729288,35.3179954842084,50.5047938990768,60.4397788616016,47.9761925113676,52.4029685844747,105.799446190312,34.5592463038589,30.9613693182456,33.3239710891663,41.518205470554,46.5480243009813,85.7402101603362,52.1149818680554,75.8197078664707,162.215230057456,28.515999632409,32.9946502046374,28.2095904102204,69.3530660444329,81.4351073017155,38.4502317465365,80.3068359288317,101.007605645481,70.0245710165718,91.5040723702153,31.2646847020471,37.0732772418077,45.4900965180614,208.547879183496,31.2289063110489,35.6348261871883,31.1507484563254,34.360698466543,27.0785266622285,37.7935474840307,33.170410494144,86.6656291975703,27.1615671095381,28.5550181053407,25.1610107554447,24.9883134967435,30.5851974148158,33.0839558196058,31.6904490068233,37.0203736282397,40.0261516768544,29.3376614110775,32.9629659298887,27.7548535197573,26.0323926579017,34.0317296161318,28.4093682702252,31.8758055430794,31.7790252547999,34.4150238230604,24.681152928765,29.7751623036282,35.2158078814848,39.564358843062,29.6711842937832,40.4973965168171,49.8378761710685,46.9722465661301,64.5590142091871,38.6921342546109,389.233326354914,151.530174698211,31.5666610792146,29.9585306699966,33.7632748663884,84.1020297679338,119.63938758854,190.986528617009,159.9162937405,245.236743584052,214.13759789783,228.998899319365,192.039625812333,118.644161942357,197.98245368522,169.668364812721,39.2612554972879,47.0703871952083,50.7184810528862,64.7611222548099,67.6894180215014,72.4503019466991,95.6768806690013,72.1813623620255,97.182212533811,91.8074899578196,105.833587870112,37.5401487861212,45.0120098809235,50.3691131742072,48.4835690118522,61.2589985771139,65.9480956113877,50.059127916441,63.7191441225889,94.1745647235119,73.3217853289508,68.1017934233361,83.3140587215877,96.4851313757967,116.967113616287,152.452152750824,47.2968166826508,34.1084541186873,31.1263105004269,30.7238605253091,30.9791127740823,31.826188913945,41.1815498732804,41.7586006415689,34.679731703362,38.0919266195893,37.7907801718244,42.6044618260919,51.8054945597687,62.3437442486315,31.6661696272472,24.4757557718419,66.8799411305889,41.9423854383193,90.7110833431025,108.069175038011,21.9672826804745,78.7709292877644,21.1390507008892,21.0836921920185,19.6035291936847,21.9851294116348,19.8290819933331,18.1168979704853,24.2886421004937,23.9649803487276,23.3219788988449,47.8768761468492,32.0784592570687,27.6001685684246,28.9938787649365,26.5601897985782,63.7176664031822,33.2609471532325,35.0695326079111,59.4106001231079,45.476491503639,63.0242053285051,74.1689201392795,41.8063788899131,42.4231880277818,80.9054100315689,76.9555842597491,48.4737053266478,32.3417625466099,29.7100805151662,25.7423780727681,30.4358589744861,29.4384787846174,27.4687979107189,30.7706668525966,28.9241701658869,47.8730284449969,97.6545846682211,54.2499859215206,32.977250588296,38.4285335536255,39.1430882783731,48.2264269772671,45.3028883296369,163.229268512716,88.0770184549921,41.0090113914846,28.4813877789247,47.0394099519068,68.7544868067122,47.0228143360327,63.3715539782068,24.646872349109,26.4508244891714,22.1119958087078,58.2349076989219,23.408863525004,32.9377536745495,41.9060722388589,31.1541561061558,50.0050270978747,48.4163003521506,44.2195988130547,91.8763356363944,72.7140000166958,59.6485740563449,22.5477175473676,30.6508919390157,37.7245358242183,26.2509104264464,33.1940746337769,36.8324353569896,34.6203854004974,32.9417093655194,39.9514102261958,45.9009829569411,40.612230882359,23.3848229264852,31.6251335852656,27.321114605844,25.5944021266256,23.4524971324401,26.6233015406895,23.9188944544738,29.2425263805663,27.8667401856887,27.2820367824899,27.7272009126311,25.1441332308561,27.7090103924149,24.4272725559479,38.5441652145859,53.2766288097755,46.6512054369274,43.4821156382963,28.5920599167642,38.0995425165899,26.5569855187534,34.5133090317296,58.1823640681022,77.9357542811552,91.144396828421,82.4969539352731,73.8968684077857,93.1712226888073,75.53938973897,83.7027900287439,73.4023561255479,72.5027854374727,73.5219642687584,12.4544817101012,22.3453929104577,28.3417785551863,32.8194068042197,13.6248555708189,10.1113929647508,30.4478017088213,30.0811183568786,35.9429514742833,31.0817570469471,30.1640366869385,32.255104377019,34.4600747489167,31.9485510500298,36.1843454420364,32.8642646985321,34.5335291315669,42.4400285020151,35.0273015682811,35.9165365127929,31.8868404718436,37.6248709057795,35.5269923021508,33.8657150753325,34.0675957103497,35.1150622750457,32.0123952527352,34.7252019097953,33.2720078922361,32.5462517561488,33.8109801653896,30.1423716069224,40.5138732737992,33.1564840137967,32.0224974228695,26.2301106834843,44.4470056046276,44.693179242046,32.5190164517034,33.5298957061664,43.5911530966392
|short_description=p1@Vmp1
}}

Revision as of 06:20, 4 August 2015

Short description:p1@Vmp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vmp1_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000018315, ENSMUST00000139040, NM_029478, uc007ksv.1, uc007ksw.1_5end
EntrezGene:75909
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vmp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G743.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5217.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6186.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I3167.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I4169.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I768.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I873.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E654.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F147.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A135.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A370.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A573.45
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.50
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H230.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I943.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1145.27
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2164.03
GP2+ M cell, pool1.CNhs13228.11845-124H9218.21
GP2+ M cell, pool2.CNhs13231.11846-124I1185.23
GP2+ M cell, pool3.CNhs13240.11847-124I2163.76
Ileum epithelium, pool1.CNhs13199.10252-104B9249.50
Ileum epithelium, pool2.CNhs13232.10253-104C1208.93
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8177.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G628.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F541.88
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F654.52
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F736.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H336.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.82
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8105.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9108.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3152.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.02
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B828.78
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.48
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C138.33
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E139.83
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C544.35
Mouse Granule cells, donor1.CNhs12131.11713-123C323.47
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.62
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.25
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D546.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F370.23
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D761.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E473.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E569.22
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.57
Mouse Schwann, donor1.CNhs12507.11728-123D957.70
Mouse Schwann, donor2.CNhs12573.11746-123F939.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7101.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C461.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C8108.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F4131.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F689.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A773.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I740.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E329.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I829.33
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G648.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G136.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G231.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G350.05
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B680.61
accessory axillary lymph node, adult.CNhs10475.1063-29H933.40
adrenal gland, adult.CNhs10508.49-24D740.67
adrenal gland, embryo E14.CNhs11038.406-44C534.18
adrenal gland, embryo E16.CNhs11004.1254-43D635.32
adrenal gland, embryo E17.CNhs11043.1263-45I150.50
adrenal gland, embryo E18.CNhs11026.1262-18F560.44
adrenal gland, neonate N00.CNhs11191.1311-23C147.98
adrenal gland, neonate N25.CNhs11223.1377-27I352.40
amnion, adult pregnant day17.5.CNhs10488.583-22A8105.80
aorta, adult.CNhs10498.46-23H134.56
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F533.32
bone (os femoris), neonate N16.CNhs11225.1525-43A641.52
bone (os femoris), neonate N20.CNhs11195.1350-25C346.55
cecum, adult.CNhs10467.37-13H485.74
cerebellum, adult.CNhs10494.15-8B252.11
cerebellum, neonate N30.CNhs11135.1395-42I275.82
colon, adult.CNhs10468.36-18H7162.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D132.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.21
corpora quadrigemina, adult.CNhs10501.16-22A469.35
corpus striatum, adult.CNhs10487.19-21D881.44
corpus striatum, neonate N00.CNhs11226.630-43F138.45
cortex, adult.CNhs10473.12-14D580.31
cortex, neonate N30.CNhs11107.1392-42F2101.01
diencephalon, adult.CNhs10482.20-12F270.02
diencephalon, neonate N30.CNhs11201.1388-42B291.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.07
epididymis, adult.CNhs10490.58-23B245.49
eyeball, adult.CNhs10484.31-12G4208.55
eyeball, embryo E12.CNhs11016.345-16C631.23
eyeball, embryo E14.CNhs10521.399-16E235.63
eyeball, embryo E15.CNhs10593.426-16C931.15
eyeball, embryo E17.CNhs11023.1261-18D434.36
eyeball, neonate N00.CNhs11207.633-15C627.08
eyeball, neonate N01.CNhs11140.1532-43E737.79
eyeball, neonate N02.CNhs11205.1551-44G833.17
eyeball, neonate N16.CNhs11188.777-19A286.67
forelimb, embryo E11.CNhs10596.335-25E227.16
forelimb, embryo E12.CNhs10600.359-14H228.56
forelimb, embryo E13.CNhs10589.384-1E225.16
forelimb, embryo E14.CNhs10577.413-26A824.99
forelimb, embryo E15.CNhs11007.437-20E730.59
forelimb, embryo E17.CNhs10598.1517-43C433.08
forelimb, embryo E18.CNhs11008.1520-43B531.69
gonad, embryo E13.CNhs11044.1564-45I637.02
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.03
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D229.34
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.96
heart, embryo E11.CNhs10586.331-24E927.75
heart, embryo E12.CNhs11015.353-12F526.03
heart, embryo E13.CNhs11013.376-3I934.03
heart, embryo E14.CNhs10597.403-26D428.41
heart, embryo E15.CNhs11017.431-16C831.88
heart, embryo E16.CNhs11021.457-17C631.78
heart, embryo E17.CNhs11025.479-18E534.42
heart, embryo E18.CNhs11030.1283-20G324.68
heart, neonate N00.CNhs11213.639-21E329.78
heart, neonate N03.CNhs11221.1349-25I235.22
heart, neonate N10.CNhs11118.749-24G139.56
heart, neonate N16.CNhs11209.782-15G129.67
heart, neonate N20.CNhs11127.821-26I640.50
heart, neonate N25.CNhs11196.1351-25D349.84
heart, neonate N30.CNhs11202.1390-42D246.97
hippocampus, adult.CNhs10478.13-16E864.56
hippocampus, neonate N00.CNhs11228.627-43G138.69
intestinal mucosa, adult.CNhs10506.860-29I3389.23
intestine, adult.CNhs10496.178-9A3151.53
intestine, embryo E12.CNhs11019.1251-16I531.57
intestine, embryo E13.CNhs11010.381-16D529.96
intestine, embryo E15.CNhs10602.976-16D833.76
intestine, embryo E16.CNhs10585.463-22H484.10
intestine, embryo E17.CNhs10582.482-18D3119.64
intestine, embryo E18.CNhs10526.1289-20F7190.99
intestine, neonate N00.CNhs11126.644-26D1159.92
intestine, neonate N01.CNhs11192.1322-23E9245.24
intestine, neonate N06.CNhs11102.688-20B8214.14
intestine, neonate N07.CNhs11095.720-20F2229.00
intestine, neonate N10.CNhs11098.755-23A5192.04
intestine, neonate N20.CNhs11187.827-18D1118.64
intestine, neonate N25.CNhs11121.1352-25E3197.98
intestine, neonate N30.CNhs11131.1384-42G1169.67
kidney, embryo E14.CNhs10606.411-4I939.26
kidney, embryo E15.CNhs10997.434-16F847.07
kidney, embryo E16.CNhs10584.464-22A550.72
kidney, embryo E17.CNhs11028.483-18I264.76
kidney, embryo E18.CNhs11001.1288-20C767.69
kidney, neonate N00.CNhs11214.646-21G772.45
kidney, neonate N10.CNhs11206.758-6D595.68
kidney, neonate N20.CNhs11113.832-19I172.18
kidney, neonate N25.CNhs11122.1353-25F397.18
kidney, neonate N30.CNhs11203.1385-42H191.81
liver, adult pregnant day01.CNhs10466.508-5B2105.83
liver, embryo E12.CNhs10601.355-15F837.54
liver, embryo E13.CNhs10524.378-3H645.01
liver, embryo E14.CNhs10594.409-16E150.37
liver, embryo E15.CNhs10520.433-16D748.48
liver, embryo E16.CNhs10523.462-17F561.26
liver, embryo E17.CNhs10510.481-18A365.95
liver, embryo E18.CNhs10579.499-43G450.06
liver, neonate N00.CNhs11117.641-24F463.72
liver, neonate N03.CNhs11123.1345-25G294.17
liver, neonate N06.CNhs11101.684-20A873.32
liver, neonate N07.CNhs11103.716-20H268.10
liver, neonate N10.CNhs11115.751-24B983.31
liver, neonate N20.CNhs11220.823-25A396.49
liver, neonate N25.CNhs11198.1368-26H1116.97
liver, neonate N30.CNhs11106.1382-42D1152.45
lung, adult.CNhs10474.28-22B147.30
lung, embryo E12.CNhs10522.354-16G234.11
lung, embryo E14.CNhs10604.404-26F831.13
lung, embryo E15.CNhs11020.432-17C530.72
lung, embryo E16.CNhs10998.458-17B630.98
lung, embryo E17.CNhs10605.480-44A631.83
lung, embryo E18.CNhs10583.1287-20I641.18
lung, neonate N00.CNhs11224.640-42C641.76
lung, neonate N06.CNhs11212.683-20E534.68
lung, neonate N07.CNhs11111.715-19A338.09
lung, neonate N10.CNhs11219.750-23E637.79
lung, neonate N20.CNhs11109.822-18A442.60
lung, neonate N25.CNhs11119.1359-25C751.81
lung, neonate N30.CNhs11133.1394-42H262.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A124.48
mammary gland, adult lactating day02.CNhs10480.595-22B666.88
mammary gland, adult pregnant day19.CNhs10476.588-5H241.94
medulla oblongata, adult.CNhs10477.17-12C290.71
medulla oblongata, neonate N30.CNhs11200.1396-42A3108.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C278.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.96
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.32
olfactory brain, adult.CNhs10489.18-22I947.88
ovary, adult.CNhs10507.91-2I732.08
ovary, embryo E18.CNhs11040.505-44H727.60
ovary, neonate N00.CNhs11217.1299-22I428.99
oviduct, adult pregnant day01.CNhs10500.988-6G626.56
pancreas, adult.CNhs10486.34-16E463.72
pancreas, embryo E14.CNhs11012.405-44F433.26
pancreas, embryo E15.CNhs11042.1556-45F235.07
pancreas, embryo E16.CNhs11003.460-26E559.41
pancreas, embryo E17.CNhs10599.1558-45G345.48
pancreas, embryo E18.CNhs10580.1535-43I763.02
pancreas, neonate N00.CNhs11105.645-26G974.17
pancreas, neonate N01.CNhs11138.1531-43D741.81
pancreas, neonate N02.CNhs11139.1539-43D842.42
pancreas, neonate N16.CNhs11136.787-43B680.91
pancreas, neonate N25.CNhs11094.1555-45E276.96
pancreas, neonate N30.CNhs11182.1548-44H548.47
pituitary gland, adult.CNhs10493.21-1G832.34
pituitary gland, embryo E12.CNhs11018.346-16E629.71
pituitary gland, embryo E13.CNhs11009.370-44C725.74
pituitary gland, embryo E14.CNhs11037.398-44A530.44
pituitary gland, embryo E15.CNhs10592.427-16B929.44
pituitary gland, embryo E16.CNhs11036.449-43F627.47
pituitary gland, embryo E17.CNhs11039.1265-44F530.77
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I747.87
placenta, adult pregnant day17.CNhs10464.577-18G397.65
prostate, adult.CNhs10470.859-1F854.25
skin, adult.CNhs10492.30-1C332.98
skin, neonate N00.CNhs11124.650-25G438.43
skin, neonate N03.CNhs11215.662-22H339.14
skin, neonate N06.CNhs11097.693-20I548.23
skin, neonate N10.CNhs11108.762-6C445.30
small intestine, neonate N16.CNhs11114.790-21I1163.23
spinal cord, adult.CNhs10505.24-13C988.08
spleen, adult.CNhs10465.25-2G241.01
spleen, embryo E16.CNhs11035.461-43C128.48
spleen, embryo E18.CNhs11011.1271-21F247.04
spleen, neonate N10.CNhs11116.752-24D168.75
spleen, neonate N20.CNhs11112.824-19H147.02
spleen, neonate N25.CNhs11099.1354-25G363.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.11
stomach, adult.CNhs10503.33-1H658.23
stomach, embryo E12.CNhs10588.356-43E323.41
stomach, embryo E15.CNhs10603.1252-16G832.94
stomach, embryo E16.CNhs11022.459-17D441.91
stomach, embryo E17.CNhs11006.1035-18D531.15
stomach, embryo E18.CNhs10999.1286-20C650.01
stomach, neonate N03.CNhs11193.1340-24B848.42
stomach, neonate N07.CNhs11210.718-18A944.22
stomach, neonate N25.CNhs11104.1355-25E491.88
stomach, neonate N30.CNhs11134.1386-42I172.71
submandibular gland, adult.CNhs10469.59-29C159.65
testis, adult.CNhs10504.57-7G522.55
testis, embryo E13.CNhs11031.389-23F530.65
testis, embryo E15.CNhs11034.443-27C537.72
testis, embryo E16.CNhs11033.470-26G526.25
testis, embryo E17.CNhs11029.486-18I533.19
testis, embryo E18.CNhs11027.503-18G536.83
testis, neonate N00.CNhs11189.1300-22B734.62
testis, neonate N07.CNhs11222.726-26I432.94
testis, neonate N10.CNhs11204.763-44D939.95
testis, neonate N20.CNhs11110.839-18H345.90
testis, neonate N30.CNhs11130.1391-42E240.61
thymus, adult.CNhs10471.38-12B523.38
thymus, embryo E14.CNhs11041.402-44I431.63
thymus, embryo E15.CNhs11005.430-45I227.32
thymus, embryo E16.CNhs11002.456-26C525.59
thymus, embryo E17.CNhs10581.478-18C123.45
thymus, embryo E18.CNhs10595.1273-19G426.62
thymus, neonate N02.CNhs11181.1541-43F823.92
thymus, neonate N03.CNhs11137.2104-43C729.24
thymus, neonate N06.CNhs11197.681-26C427.87
thymus, neonate N07.CNhs11211.713-19D327.28
thymus, neonate N10.CNhs11194.748-24E427.73
thymus, neonate N20.CNhs11186.820-7A225.14
thymus, neonate N25.CNhs11125.1362-25G727.71
thymus, neonate N30.CNhs11132.1393-42G224.43
tongue, adult.CNhs10499.32-1B438.54
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H353.28
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F746.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G543.48
urinary bladder, adult.CNhs10481.879-12E428.59
uterus, adult pregnant day19.CNhs10497.590-15F538.10
uterus, adult.CNhs10509.92-27E526.56
vagina, adult.CNhs10502.89-27D534.51
vesicular gland, adult.CNhs10491.51-27F858.18
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A177.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A291.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A382.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A493.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A575.54
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A683.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A773.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A872.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A973.52
whole body, embryo E11.CNhs11014.324-5I812.45
whole body, embryo E12.CNhs10587.857-27C922.35
whole body, embryo E13.CNhs10512.372-23H228.34
whole body, embryo E14.5.CNhs10578.420-27D232.82
whole body, embryo E14.CNhs10519.395-14B113.62
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.94
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G534.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G534.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G531.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G535.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G533.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G534.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G534.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G533.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F932.02
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B344.45
whole body, neonate N00.CNhs10525.657-19C244.69
whole body, neonate N01.CNhs10576.659-23C632.52
whole body, neonate N06.CNhs10515.692-21D133.53
whole body, neonate N10.CNhs10518.761-6B443.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine7.70e-1331
gastrointestinal system1.48e-1147
trunk2.40e-0890
abdomen element3.38e-0849
abdominal segment element3.38e-0849
abdominal segment of trunk3.38e-0849
abdomen3.38e-0849
trunk region element5.58e-0879
endoderm-derived structure6.86e-08118
endoderm6.86e-08118
presumptive endoderm6.86e-08118
organ component layer7.28e-0824
mucosa1.70e-0715
digestive system1.91e-07116
digestive tract1.91e-07116
primitive gut1.91e-07116
mesenchyme2.08e-0761
entire embryonic mesenchyme2.08e-0761
subdivision of trunk7.03e-0766
subdivision of digestive tract9.55e-07114
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