FFCP PHASE1:Mm9::chr8:87514769..87514800,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:87514769..87514800,- | |||
|description=CAGE_peak_at_chr8:87514769..87514800,- | |description=CAGE_peak_at_chr8:87514769..87514800,- | ||
|id=chr8:87514769..87514800,- | |id=chr8:87514769..87514800,- | ||
|ontology_enrichment_celltype=CL:0002563!2.65e-07!9;CL:0002251!2.65e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.08e-10,9;CL:0002251,6.08e-10,9;CL:0000075,6.95e-08,7;CL:0000239,1.32e-07,6;CL:0000677,1.32e-07,6;CL:0000584,1.32e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.13e-23!43;UBERON:0005409!1.36e-21!59;UBERON:0004119!9.65e-18!130;UBERON:0000925!9.65e-18!130;UBERON:0006595!9.65e-18!130;UBERON:0001007!1.55e-17!128;UBERON:0001555!1.55e-17!128;UBERON:0007026!1.55e-17!128;UBERON:0004921!1.69e-16!126;UBERON:0004185!1.69e-16!126;UBERON:0000344!1.15e-10!15;UBERON:0001242!1.24e-09!13;UBERON:0000060!1.24e-09!13;UBERON:0001262!1.24e-09!13;UBERON:0004786!1.24e-09!13;UBERON:0002108!1.54e-07!16;UBERON:0001008!2.31e-07!17;UBERON:0000485!2.54e-07!11;UBERON:0003350!2.65e-07!9;UBERON:0004808!2.65e-07!9;UBERON:0001277!2.65e-07!9;UBERON:0006554!6.94e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.35e-26,31;UBERON:0005409,1.24e-22,47;UBERON:0001007,4.81e-15,116;UBERON:0001555,4.81e-15,116;UBERON:0007026,4.81e-15,116;UBERON:0000344,7.77e-15,15;UBERON:0004119,1.83e-14,118;UBERON:0000925,1.83e-14,118;UBERON:0006595,1.83e-14,118;UBERON:0004921,7.52e-14,114;UBERON:0001242,2.48e-13,13;UBERON:0001262,2.48e-13,13;UBERON:0004786,2.48e-13,13;UBERON:0003350,6.08e-10,9;UBERON:0004808,6.08e-10,9;UBERON:0001277,6.08e-10,9;UBERON:0000485,5.25e-09,11;UBERON:0004923,2.26e-08,24;UBERON:0005177,4.56e-07,79;UBERON:0001008,5.36e-07,19 | |||
|phase1_expression=0.640595388419176,5.23463111459042,4.09499315450582,10.8887116070459,12.0214975187123,6.21153306073992,5.60670337429262,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,3.35984087866154,2.75291137280604,2.29692785646008,3.4460959692726,4.30942465371778,4.75058548640935,3.52842181663903,1.99557459589774,0,0,0,6.35473563452804,1.49611180822643,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,1.26759077799012,0,0,0,0.216491041011214,1.01343946190039,0.505524445014783,1.02765491747154,0.517875767294343,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,2.47194967734374,0,0,0,0,0,7.45567044872489,0,0,3.32094171771169,0,0,0.127070227073065,0.299581278809645,0,0,0,0,0,0.162241263067758,0.916554274652847,0.622034853050465,1.76905930903572,1.05220927943237,0,0,0.180062129805349,0,0.0680364991513279,0,0.281105173679186,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0,0,1.74126083261083,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,7.93005079161115,4.7601101999438,0.639864751605702,1.16118335930219,2.70621668776396,4.84040459096022,4.66993892074228,1.90225626112559,4.2707615539006,2.63518327558417,4.02136334080431,3.97912944082302,2.9244613067868,2.69645822596266,5.83572734661674,6.57166201739412,1.13800740571849,1.14248512609729,1.1270773567308,2.03651327845314,1.74557238450863,2.17421041659988,2.97211724484009,3.09981310757165,2.98297582898612,2.96153193412321,1.1858105083486,0,0,0,0,0.241177159752417,0.50925170356284,1.15078454980324,2.59416362840057,1.09824565275233,2.87536413054709,1.11642284300551,2.18426371180192,1.01031551178845,1.07638448113147,1.92977408545347,0.923765950833023,0,0.814824882210129,0.848725428875941,1.17345124144251,1.00503754465089,1.42826184531608,1.36593553500459,1.26108115284953,1.10732344824387,0.318909537314974,0.81931657357869,0.172684981865896,1.3018415272336,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,1.31976098378028,11.9470624505967,0.971122544619926,1.51161778482376,2.82907619633847,3.54362271456927,4.30409207121498,3.35956781118687,1.45413491791002,2.49548164869305,4.10847785316561,1.05418608574999,0,1.70219802876894,0.18006109403131,0.129358683782755,0.428674070063185,0.709360934569094,0.356737635204141,0.822745103010605,2.43571959291679,0.23467170806371,0.847328283455281,1.54369878638473,3.95727007059552,0.645857706783622,1.20625849856312,0.954978752025092,1.64140899745061,5.53813589596716,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0.158167996790568,2.03319467126849,2.26811215725783,0.836353184057875,0.655087691238533,1.34864346384821,1.40510874733071,1.57053565190418,4.01806417204558,1.24267862617385,0,0,0.330916980914195,0,0,0.337912250981556,0.117357238645754,0.2604087696879,0.104859344425711,0.724752362478018,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0.403304740547362,0.292373642219257,0.192423683280659,0,0.680191150845634,0.887943813496259,0.358855426437903,1.17519231454855,3.09103350451505,0.750729901804728,1.64836461840539,2.78678892802786,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0.729320151204882,0.209613162627982,0.551530525350042,0.222246727801615,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.768301828858431,0.861532034334199,0.952587382566147,0.463537303779422,0.578727661391115,1.23625770240992,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,1.0174249164263,0.941093804153306,0.338458431566706,0.548783918618318,1.57841826862706,1.22223702461276,0,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,0.578719832943424,0.749431733813838,0.935726433781634,0.644613162144895,0,0.441182838239031,0 | |phase1_expression=0.640595388419176,5.23463111459042,4.09499315450582,10.8887116070459,12.0214975187123,6.21153306073992,5.60670337429262,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,3.35984087866154,2.75291137280604,2.29692785646008,3.4460959692726,4.30942465371778,4.75058548640935,3.52842181663903,1.99557459589774,0,0,0,6.35473563452804,1.49611180822643,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.73918693221007,0,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,1.26759077799012,0,0,0,0.216491041011214,1.01343946190039,0.505524445014783,1.02765491747154,0.517875767294343,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,2.47194967734374,0,0,0,0,0,7.45567044872489,0,0,3.32094171771169,0,0,0.127070227073065,0.299581278809645,0,0,0,0,0,0.162241263067758,0.916554274652847,0.622034853050465,1.76905930903572,1.05220927943237,0,0,0.180062129805349,0,0.0680364991513279,0,0.281105173679186,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0,0,1.74126083261083,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,7.93005079161115,4.7601101999438,0.639864751605702,1.16118335930219,2.70621668776396,4.84040459096022,4.66993892074228,1.90225626112559,4.2707615539006,2.63518327558417,4.02136334080431,3.97912944082302,2.9244613067868,2.69645822596266,5.83572734661674,6.57166201739412,1.13800740571849,1.14248512609729,1.1270773567308,2.03651327845314,1.74557238450863,2.17421041659988,2.97211724484009,3.09981310757165,2.98297582898612,2.96153193412321,1.1858105083486,0,0,0,0,0.241177159752417,0.50925170356284,1.15078454980324,2.59416362840057,1.09824565275233,2.87536413054709,1.11642284300551,2.18426371180192,1.01031551178845,1.07638448113147,1.92977408545347,0.923765950833023,0,0.814824882210129,0.848725428875941,1.17345124144251,1.00503754465089,1.42826184531608,1.36593553500459,1.26108115284953,1.10732344824387,0.318909537314974,0.81931657357869,0.172684981865896,1.3018415272336,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,1.31976098378028,11.9470624505967,0.971122544619926,1.51161778482376,2.82907619633847,3.54362271456927,4.30409207121498,3.35956781118687,1.45413491791002,2.49548164869305,4.10847785316561,1.05418608574999,0,1.70219802876894,0.18006109403131,0.129358683782755,0.428674070063185,0.709360934569094,0.356737635204141,0.822745103010605,2.43571959291679,0.23467170806371,0.847328283455281,1.54369878638473,3.95727007059552,0.645857706783622,1.20625849856312,0.954978752025092,1.64140899745061,5.53813589596716,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0.158167996790568,2.03319467126849,2.26811215725783,0.836353184057875,0.655087691238533,1.34864346384821,1.40510874733071,1.57053565190418,4.01806417204558,1.24267862617385,0,0,0.330916980914195,0,0,0.337912250981556,0.117357238645754,0.2604087696879,0.104859344425711,0.724752362478018,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0.403304740547362,0.292373642219257,0.192423683280659,0,0.680191150845634,0.887943813496259,0.358855426437903,1.17519231454855,3.09103350451505,0.750729901804728,1.64836461840539,2.78678892802786,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0,0.729320151204882,0.209613162627982,0.551530525350042,0.222246727801615,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.768301828858431,0.861532034334199,0.952587382566147,0.463537303779422,0.578727661391115,1.23625770240992,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,1.0174249164263,0.941093804153306,0.338458431566706,0.548783918618318,1.57841826862706,1.22223702461276,0,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,0.578719832943424,0.749431733813838,0.935726433781634,0.644613162144895,0,0.441182838239031,0 | ||
|short_description=p@chr8:87514769..87514800,- | |short_description=p@chr8:87514769..87514800,- | ||
}} | }} |
Latest revision as of 06:44, 4 August 2015
Short description: | p@chr8:87514769..87514800, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:87514769..87514800, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.08e-10 | 9 |
epithelial cell of alimentary canal | 6.08e-10 | 9 |
columnar/cuboidal epithelial cell | 6.95e-08 | 7 |
brush border epithelial cell | 1.32e-07 | 6 |
gut absorptive cell | 1.32e-07 | 6 |
enterocyte | 1.32e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.35e-26 | 31 |
gastrointestinal system | 1.24e-22 | 47 |
digestive system | 4.81e-15 | 116 |
digestive tract | 4.81e-15 | 116 |
primitive gut | 4.81e-15 | 116 |
mucosa | 7.77e-15 | 15 |
endoderm-derived structure | 1.83e-14 | 118 |
endoderm | 1.83e-14 | 118 |
presumptive endoderm | 1.83e-14 | 118 |
subdivision of digestive tract | 7.52e-14 | 114 |
intestinal mucosa | 2.48e-13 | 13 |
wall of intestine | 2.48e-13 | 13 |
gastrointestinal system mucosa | 2.48e-13 | 13 |
epithelium of mucosa | 6.08e-10 | 9 |
gastrointestinal system epithelium | 6.08e-10 | 9 |
intestinal epithelium | 6.08e-10 | 9 |
simple columnar epithelium | 5.25e-09 | 11 |
organ component layer | 2.26e-08 | 24 |
trunk region element | 4.56e-07 | 79 |
renal system | 5.36e-07 | 19 |