FFCP PHASE1:Mm9::chr19:6968774..6968790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1726 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6968774..6968790,+ | |||
|description=CAGE_peak_at_chr19:6968774..6968790,+ | |||
|id=chr19:6968774..6968790,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.86e-12!9;CL:0002251!5.86e-12!9;CL:0000239!7.15e-09!6;CL:0000677!7.15e-09!6;CL:0000212!7.15e-09!6;CL:0000584!7.15e-09!6;CL:0002076!1.65e-07!15;CL:0000075!2.02e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.33e-14,9;CL:0002251,1.33e-14,9;CL:0000239,1.22e-10,6;CL:0000677,1.22e-10,6;CL:0000584,1.22e-10,6;CL:0000075,3.93e-09,7;CL:0002076,1.51e-08,15;CL:0000066,2.25e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.11e-17!15;UBERON:0001242!1.82e-15!13;UBERON:0000060!1.82e-15!13;UBERON:0001262!1.82e-15!13;UBERON:0004786!1.82e-15!13;UBERON:0000160!1.06e-13!43;UBERON:0003350!5.86e-12!9;UBERON:0004808!5.86e-12!9;UBERON:0001277!5.86e-12!9;UBERON:0005409!1.39e-11!59;UBERON:0004923!4.09e-10!24;UBERON:0000485!2.47e-09!11;UBERON:0000014!6.83e-08!5;UBERON:0001003!6.83e-08!5;UBERON:0002097!6.83e-08!5;UBERON:0002199!6.83e-08!5;UBERON:0007029!6.83e-08!5;UBERON:0007376!6.83e-08!5;UBERON:0002416!6.83e-08!5;UBERON:0007383!6.83e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.14e-28,31;UBERON:0005409,1.75e-17,47;UBERON:0003350,1.33e-14,9;UBERON:0004808,1.33e-14,9;UBERON:0001277,1.33e-14,9;UBERON:0001242,1.25e-13,13;UBERON:0001262,1.25e-13,13;UBERON:0004786,1.25e-13,13;UBERON:0000014,5.47e-13,5;UBERON:0001003,5.47e-13,5;UBERON:0002097,5.47e-13,5;UBERON:0002199,5.47e-13,5;UBERON:0007029,5.47e-13,5;UBERON:0007376,5.47e-13,5;UBERON:0002416,5.47e-13,5;UBERON:0007383,5.47e-13,5;UBERON:0000485,7.48e-12,11;UBERON:0000344,1.06e-11,15;UBERON:0004921,2.27e-07,114;UBERON:0001007,3.48e-07,116;UBERON:0001555,3.48e-07,116;UBERON:0007026,3.48e-07,116;UBERON:0004119,5.25e-07,118;UBERON:0000925,5.25e-07,118;UBERON:0006595,5.25e-07,118;UBERON:0004923,5.47e-07,24 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,5.44435580352294,3.50627010962443,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0.430761996159075,1.50829862880122,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,1.58670339998127,0,0,0,0,0,0.380451252225118,2.37264530772256,0.164698954724011,1.00534083520108,1.59165177632921,1.36474860983384,0.898819408654221,2.80979464837102,1.59313018603494,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,2.80306630000516,0.645857706783622,2.71408162176701,3.46179797609096,4.59594519286172,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.330613822901344,0.26175594198403,0.259229946583586,0,0,0,0,0,0.258319646955462,0.506868376472335,0,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,3.86379188064381,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0,0,0.441182838239031,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,5.44435580352294,3.50627010962443,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0.430761996159075,1.50829862880122,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,1.32987716286794,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,1.58670339998127,0,0,0,0,0,0.380451252225118,2.37264530772256,0.164698954724011,1.00534083520108,1.59165177632921,1.36474860983384,0.898819408654221,2.80979464837102,1.59313018603494,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,2.80306630000516,0.645857706783622,2.71408162176701,3.46179797609096,4.59594519286172,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.330613822901344,0.26175594198403,0.259229946583586,0,0,0,0,0,0.258319646955462,0.506868376472335,0,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,3.86379188064381,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.436039249896986,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0.467863216890817,0,0,0.441182838239031,0 | ||
|short_description=p@chr19:6968774..6968790,+ | |||
}} | }} |
Latest revision as of 12:43, 4 August 2015
Short description: | p@chr19:6968774..6968790, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6968774..6968790, + |
Coexpression cluster: | MCL_coexpression_mm9:1726 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.33e-14 | 9 |
epithelial cell of alimentary canal | 1.33e-14 | 9 |
brush border epithelial cell | 1.22e-10 | 6 |
gut absorptive cell | 1.22e-10 | 6 |
enterocyte | 1.22e-10 | 6 |
columnar/cuboidal epithelial cell | 3.93e-09 | 7 |
endo-epithelial cell | 1.51e-08 | 15 |
epithelial cell | 2.25e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.14e-28 | 31 |
gastrointestinal system | 1.75e-17 | 47 |
epithelium of mucosa | 1.33e-14 | 9 |
gastrointestinal system epithelium | 1.33e-14 | 9 |
intestinal epithelium | 1.33e-14 | 9 |
intestinal mucosa | 1.25e-13 | 13 |
wall of intestine | 1.25e-13 | 13 |
gastrointestinal system mucosa | 1.25e-13 | 13 |
zone of skin | 5.47e-13 | 5 |
skin epidermis | 5.47e-13 | 5 |
skin of body | 5.47e-13 | 5 |
integument | 5.47e-13 | 5 |
surface | 5.47e-13 | 5 |
outer epithelium | 5.47e-13 | 5 |
integumental system | 5.47e-13 | 5 |
enveloping layer of ectoderm | 5.47e-13 | 5 |
simple columnar epithelium | 7.48e-12 | 11 |
mucosa | 1.06e-11 | 15 |
subdivision of digestive tract | 2.27e-07 | 114 |
digestive system | 3.48e-07 | 116 |
digestive tract | 3.48e-07 | 116 |
primitive gut | 3.48e-07 | 116 |
endoderm-derived structure | 5.25e-07 | 118 |
endoderm | 5.25e-07 | 118 |
presumptive endoderm | 5.25e-07 | 118 |
organ component layer | 5.47e-07 | 24 |