FFCP PHASE1:Mm9::chr10:61188895..61188907,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=95|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:61188895..61188907,+|id=chr10:61188895..61188907,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!3.42e-12!11;UBERON:0000162!7.45e-10!3;UBERON:0001353!7.45e-10!3;UBERON:0000163!7.45e-10!3;UBERON:0006866!7.45e-10!3;UBERON:0001046!7.45e-10!3;UBERON:0000164!7.45e-10!3;UBERON:0000931!7.45e-10!3;UBERON:0000161!8.79e-10!5;UBERON:0000474!7.58e-08!9;UBERON:0010147!4.55e-07!2;UBERON:0003937!4.55e-07!2;UBERON:0005399!4.55e-07!2;UBERON:0001911!5.90e-07!2;UBERON:0000076!5.90e-07!2;UBERON:0005333!5.90e-07!2;UBERON:0008425!5.90e-07!2;UBERON:0005311!5.90e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000162,2.28e-24,3;UBERON:0001353,2.28e-24,3;UBERON:0000163,2.28e-24,3;UBERON:0006866,2.28e-24,3;UBERON:0001046,2.28e-24,3;UBERON:0000164,2.28e-24,3;UBERON:0000931,2.28e-24,3;UBERON:0001255,5.15e-19,1;UBERON:0001556,5.15e-19,1;UBERON:0000998,7.74e-19,1;UBERON:0007194,7.74e-19,1;UBERON:0006868,7.74e-19,1;UBERON:0000996,1.16e-18,1;UBERON:0006834,1.74e-18,1;UBERON:0004175,3.44e-18,9;UBERON:0000161,4.39e-15,5;UBERON:0004122,4.39e-15,5;UBERON:0003100,6.63e-15,11;UBERON:0003975,7.12e-15,5;UBERON:0003064,4.05e-12,14;UBERON:0010147,4.13e-10,2;UBERON:0003937,4.13e-10,2;UBERON:0005399,4.13e-10,2;UBERON:0001911,7.56e-10,2;UBERON:0000076,7.56e-10,2;UBERON:0005333,7.56e-10,2;UBERON:0008425,7.56e-10,2;UBERON:0005311,7.56e-10,2;UBERON:0003134,1.08e-09,8;UBERON:0007023,3.67e-09,51;UBERON:0001008,3.87e-09,19;UBERON:0000474,1.00e-08,9;UBERON:0003133,2.53e-07,24;UBERON:0005156,8.19e-07,26;UBERON:0000990,8.19e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,1.47529281905711,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0,0,0,0.233753804363138,0.226730383615211,0,0,0,15.261977928543,1.50145980360946,0.36630324853453,1.92931541171159,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr10:61188895..61188907,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=95 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:61188895..61188907,+ | |||
|description=CAGE_peak_at_chr10:61188895..61188907,+ | |||
|id=chr10:61188895..61188907,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!3.42e-12!11;UBERON:0000162!7.45e-10!3;UBERON:0001353!7.45e-10!3;UBERON:0000163!7.45e-10!3;UBERON:0006866!7.45e-10!3;UBERON:0001046!7.45e-10!3;UBERON:0000164!7.45e-10!3;UBERON:0000931!7.45e-10!3;UBERON:0000161!8.79e-10!5;UBERON:0000474!7.58e-08!9;UBERON:0010147!4.55e-07!2;UBERON:0003937!4.55e-07!2;UBERON:0005399!4.55e-07!2;UBERON:0001911!5.90e-07!2;UBERON:0000076!5.90e-07!2;UBERON:0005333!5.90e-07!2;UBERON:0008425!5.90e-07!2;UBERON:0005311!5.90e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,2.28e-24,3;UBERON:0001353,2.28e-24,3;UBERON:0000163,2.28e-24,3;UBERON:0006866,2.28e-24,3;UBERON:0001046,2.28e-24,3;UBERON:0000164,2.28e-24,3;UBERON:0000931,2.28e-24,3;UBERON:0001255,5.15e-19,1;UBERON:0001556,5.15e-19,1;UBERON:0000998,7.74e-19,1;UBERON:0007194,7.74e-19,1;UBERON:0006868,7.74e-19,1;UBERON:0000996,1.16e-18,1;UBERON:0006834,1.74e-18,1;UBERON:0004175,3.44e-18,9;UBERON:0000161,4.39e-15,5;UBERON:0004122,4.39e-15,5;UBERON:0003100,6.63e-15,11;UBERON:0003975,7.12e-15,5;UBERON:0003064,4.05e-12,14;UBERON:0010147,4.13e-10,2;UBERON:0003937,4.13e-10,2;UBERON:0005399,4.13e-10,2;UBERON:0001911,7.56e-10,2;UBERON:0000076,7.56e-10,2;UBERON:0005333,7.56e-10,2;UBERON:0008425,7.56e-10,2;UBERON:0005311,7.56e-10,2;UBERON:0003134,1.08e-09,8;UBERON:0007023,3.67e-09,51;UBERON:0001008,3.87e-09,19;UBERON:0000474,1.00e-08,9;UBERON:0003133,2.53e-07,24;UBERON:0005156,8.19e-07,26;UBERON:0000990,8.19e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,1.47529281905711,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0,0,0,0.233753804363138,0.226730383615211,0,0,0,15.261977928543,1.50145980360946,0.36630324853453,1.92931541171159,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr10:61188895..61188907,+ | |||
}} |
Latest revision as of 13:28, 4 August 2015
Short description: | p@chr10:61188895..61188907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:61188895..61188907, + |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cloaca | 2.28e-24 | 3 |
anal region | 2.28e-24 | 3 |
embryonic cloaca | 2.28e-24 | 3 |
terminal part of digestive tract | 2.28e-24 | 3 |
hindgut | 2.28e-24 | 3 |
primitive urogenital sinus | 2.28e-24 | 3 |
proctodeum | 2.28e-24 | 3 |
urinary bladder | 5.15e-19 | 1 |
lower urinary tract | 5.15e-19 | 1 |
seminal vesicle | 7.74e-19 | 1 |
vesicular gland | 7.74e-19 | 1 |
seminal fluid secreting gland | 7.74e-19 | 1 |
vagina | 1.16e-18 | 1 |
uterus or analog | 1.74e-18 | 1 |
internal genitalia | 3.44e-18 | 9 |
orifice | 4.39e-15 | 5 |
genitourinary system | 4.39e-15 | 5 |
female organism | 6.63e-15 | 11 |
internal female genitalia | 7.12e-15 | 5 |
intermediate mesoderm | 4.05e-12 | 14 |
male accessory sex gland | 4.13e-10 | 2 |
sex gland | 4.13e-10 | 2 |
male reproductive gland | 4.13e-10 | 2 |
mammary gland | 7.56e-10 | 2 |
external ectoderm | 7.56e-10 | 2 |
mammary bud | 7.56e-10 | 2 |
mammary ridge | 7.56e-10 | 2 |
mammary placode | 7.56e-10 | 2 |
female reproductive organ | 1.08e-09 | 8 |
adult organism | 3.67e-09 | 51 |
renal system | 3.87e-09 | 19 |
female reproductive system | 1.00e-08 | 9 |
reproductive organ | 2.53e-07 | 24 |
reproductive structure | 8.19e-07 | 26 |
reproductive system | 8.19e-07 | 26 |