FFCP PHASE1:Mm9::chr2:165618343..165618355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=34 | |MCL_coexpression_id=34 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:165618343..165618355,- | |||
|description=CAGE_peak_at_chr2:165618343..165618355,- | |description=CAGE_peak_at_chr2:165618343..165618355,- | ||
|id=chr2:165618343..165618355,- | |id=chr2:165618343..165618355,- | ||
|ontology_enrichment_celltype=CL:0000542!3.70e-08!13;CL:0000051!3.70e-08!13;CL:0000893!3.74e-08!6;CL:0002489!3.74e-08!6;CL:0000898!3.74e-08!6;CL:0000809!3.74e-08!6;CL:0000810!3.74e-08!6;CL:0000895!3.74e-08!6;CL:0000808!3.74e-08!6;CL:0000894!3.74e-08!6;CL:0000806!3.74e-08!6;CL:0000807!3.74e-08!6;CL:0000805!3.74e-08!6;CL:0002425!3.74e-08!6;CL:0002436!3.74e-08!6;CL:0002427!3.74e-08!6;CL:0002428!3.74e-08!6;CL:0002429!3.74e-08!6;CL:0002433!3.74e-08!6;CL:0002431!3.74e-08!6;CL:0002432!3.74e-08!6;CL:0000084!1.08e-07!11;CL:0000827!1.08e-07!11;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0000988!2.10e-07!32;CL:0002032!2.10e-07!32;CL:0000037!2.10e-07!32;CL:0000566!2.10e-07!32;CL:0000837!2.10e-07!32;CL:0002320!4.39e-07!46;CL:0000134!4.39e-07!46;CL:0000838!5.96e-07!12 | |ontology_enrichment_celltype=CL:0000542!3.70e-08!13;CL:0000051!3.70e-08!13;CL:0000893!3.74e-08!6;CL:0002489!3.74e-08!6;CL:0000898!3.74e-08!6;CL:0000809!3.74e-08!6;CL:0000810!3.74e-08!6;CL:0000895!3.74e-08!6;CL:0000808!3.74e-08!6;CL:0000894!3.74e-08!6;CL:0000806!3.74e-08!6;CL:0000807!3.74e-08!6;CL:0000805!3.74e-08!6;CL:0002425!3.74e-08!6;CL:0002436!3.74e-08!6;CL:0002427!3.74e-08!6;CL:0002428!3.74e-08!6;CL:0002429!3.74e-08!6;CL:0002433!3.74e-08!6;CL:0002431!3.74e-08!6;CL:0002432!3.74e-08!6;CL:0000084!1.08e-07!11;CL:0000827!1.08e-07!11;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0000988!2.10e-07!32;CL:0002032!2.10e-07!32;CL:0000037!2.10e-07!32;CL:0000566!2.10e-07!32;CL:0000837!2.10e-07!32;CL:0002320!4.39e-07!46;CL:0000134!4.39e-07!46;CL:0000838!5.96e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-08,32;CL:0002032,1.17e-08,32;CL:0000037,1.17e-08,32;CL:0000837,1.17e-08,32;CL:0000893,4.75e-08,6;CL:0002489,4.75e-08,6;CL:0000898,4.75e-08,6;CL:0000809,4.75e-08,6;CL:0000810,4.75e-08,6;CL:0000895,4.75e-08,6;CL:0000808,4.75e-08,6;CL:0000894,4.75e-08,6;CL:0000806,4.75e-08,6;CL:0000807,4.75e-08,6;CL:0000805,4.75e-08,6;CL:0002425,4.75e-08,6;CL:0002436,4.75e-08,6;CL:0002427,4.75e-08,6;CL:0002428,4.75e-08,6;CL:0002429,4.75e-08,6;CL:0002433,4.75e-08,6;CL:0002431,4.75e-08,6;CL:0002432,4.75e-08,6;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.32e-09!48;UBERON:0002390!1.44e-07!45;UBERON:0003061!1.44e-07!45;UBERON:0004177!1.91e-07!29;UBERON:0002370!4.37e-07!23;UBERON:0000974!4.37e-07!23;UBERON:0004807!4.37e-07!23;UBERON:0005058!4.37e-07!23;UBERON:0003351!4.37e-07!23;UBERON:0009113!4.37e-07!23;UBERON:0003295!4.37e-07!23;UBERON:0009722!4.37e-07!23;UBERON:0005562!4.37e-07!23;UBERON:0007690!4.37e-07!23;UBERON:0002384!4.39e-07!46 | |ontology_enrichment_uberon=UBERON:0002193!5.32e-09!48;UBERON:0002390!1.44e-07!45;UBERON:0003061!1.44e-07!45;UBERON:0004177!1.91e-07!29;UBERON:0002370!4.37e-07!23;UBERON:0000974!4.37e-07!23;UBERON:0004807!4.37e-07!23;UBERON:0005058!4.37e-07!23;UBERON:0003351!4.37e-07!23;UBERON:0009113!4.37e-07!23;UBERON:0003295!4.37e-07!23;UBERON:0009722!4.37e-07!23;UBERON:0005562!4.37e-07!23;UBERON:0007690!4.37e-07!23;UBERON:0002384!4.39e-07!46 | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,1.63845168425395,1.02730780935303,0.8774937489487,0,0.174840804837995,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0.270011876663381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,5.63131085177825,2.99951365496704,3.81210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,14.2781881194838,13.0154850661002,12.9907975376158,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,1.63845168425395,1.02730780935303,0.8774937489487,0,0.174840804837995,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0.270011876663381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,5.63131085177825,2.99951365496704,3.81210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,14.2781881194838,13.0154850661002,12.9907975376158,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:165618343..165618355,- | |short_description=p@chr2:165618343..165618355,- | ||
}} | }} |
Latest revision as of 13:36, 4 August 2015
Short description: | p@chr2:165618343..165618355, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:165618343..165618355, - |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.17e-08 | 32 |
hematopoietic stem cell | 1.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.17e-08 | 32 |
thymocyte | 4.75e-08 | 6 |
double negative thymocyte | 4.75e-08 | 6 |
naive T cell | 4.75e-08 | 6 |
double-positive, alpha-beta thymocyte | 4.75e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 4.75e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.75e-08 | 6 |
DN4 thymocyte | 4.75e-08 | 6 |
DN1 thymic pro-T cell | 4.75e-08 | 6 |
DN2 thymocyte | 4.75e-08 | 6 |
DN3 thymocyte | 4.75e-08 | 6 |
immature single positive thymocyte | 4.75e-08 | 6 |
early T lineage precursor | 4.75e-08 | 6 |
mature CD4 single-positive thymocyte | 4.75e-08 | 6 |
resting double-positive thymocyte | 4.75e-08 | 6 |
double-positive blast | 4.75e-08 | 6 |
CD69-positive double-positive thymocyte | 4.75e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 4.75e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.75e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 4.75e-08 | 6 |
stem cell | 3.71e-07 | 97 |