FFCP PHASE1:Mm9::chr5:8912759..8912763,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:8912759..8912763,+ to FFCP PHASE1:Mm9::chr5:8912759..8912763,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1047 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:8912759..8912763,+ | |||
|description=CAGE_peak_at_chr5:8912759..8912763,+ | |||
|id=chr5:8912759..8912763,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.17e-07!70;CL:0000220!1.17e-07!70;CL:0000333!1.58e-07!10;CL:0000095!1.58e-07!10;CL:0000243!1.58e-07!10;CL:0000123!1.58e-07!10;CL:0000125!1.58e-07!10;CL:0000030!1.58e-07!10;CL:0000339!1.58e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.00e-19,10;CL:0000095,2.00e-19,10;CL:0000243,2.00e-19,10;CL:0000123,2.00e-19,10;CL:0000125,2.00e-19,10;CL:0000030,2.00e-19,10;CL:0000339,2.00e-19,10;CL:0002321,3.46e-18,70;CL:0002453,5.14e-16,8;CL:0000128,5.14e-13,6;CL:0000126,5.14e-13,6;CL:0000127,5.14e-13,6;CL:0000223,3.35e-09,20;CL:0000066,3.04e-08,25;CL:0000221,6.36e-08,44;CL:0000133,6.36e-08,44;CL:0002293,8.00e-08,3;CL:0000068,2.11e-07,3;CL:0002202,2.11e-07,3;CL:0000069,2.11e-07,3;CL:0002632,2.11e-07,3;CL:0002368,2.11e-07,3;CL:0000307,2.11e-07,3;CL:0000377,2.11e-07,3;CL:0002319,3.81e-07,43;CL:0000215,5.66e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.11e-07,3;UBERON:0001005,2.11e-07,3;UBERON:0007196,2.11e-07,3;UBERON:0001558,2.11e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.703943610758334,0.70219357896598,0.513653904676515,0,0,0,0.333109761815663,0,0,0.788655413395594,1.09691546884591,0.84877930359606,0,0.198581902401771,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0.755380907853464,0.304130793658544,1.65192076945513,1.56478268869608,2.39827672018491,4.39372365468944,5.8328969722285,2.09979632438044,7.18762821824858,0.503347818173209,0.725362142011344,0,1.28629718017973,0.286533439938757,2.06268836910977,0.809265843438391,0,0,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,1.15265491596466,0.311068836925433,0.405017814995072,0.630974884054146,0,0.883474163806454,1.22490799214954,0.383381884072945,0.919218786610021,0,0.255374676170375,0.307213066512487,0.659431438650969,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0,0.372798891650601,3.10477392666055,1.28471652181535,4.92769630792852,0,4.75979933595425,0,1.29955283489534,0,0.421333260395256,0.511290967734173,3.37721805983729,1.41335829804136,1.12674735821344,5.13305909657271,15.2883143823987,7.11066703153331,4.5463118612355,4.30711771307668,3.53867111510348,0,0.517875767294343,0.29688427812965,0.346970653532272,0.913396434936424,0.461230994512117,0.904335843315735,0.352766121407114,0.125666591329675,0.988779870937496,0.433798070759735,0,0.808834249737046,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0.239630249011841,0,0.254140454146129,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.712875546952214,0,0,0,0.390361328888111,0.459804208866946,1.44049703844279,0.150704817835715,0.408218994907967,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0.945530400839096,0.351902248327898,0.876782929710299,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.621377317606506,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,0.617068451549513,0.465067889500816,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.823236899034275,0,0.528901133327089,0.426576501070468,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0,0,0.494096864172033,0,0,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.203651327845314,0.775809948670503,0.420814919341911,0.379419222745544,0.295220295959204,0.31399745568275,0.370191491765402,1.1858105083486,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0.863088412352432,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,0,0.189491411770485,0.651859905768103,0.678980343100753,0.469380496577004,0.670025029767263,0.714130922658041,1.75620283072019,0.630540576424764,1.10732344824387,0.956728611944923,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0.819674726883377,0,0.94652465824877,1.17131623288992,1.72338718186239,1.67278158566786,0.891194696329576,0.566153061577665,0.809621403349789,1.16902343164525,0.790575555893047,0,0.283880170416537,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,1.69946445308487,0.302323556964751,0.565815239267694,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.517434735131018,0,0.709360934569094,0.356737635204141,0.164549020602121,0.304464949114599,1.17335854031855,0.42366414172764,0.661585194164886,0.32977250588296,0.484393280087717,0.241251699712623,0.835606408021955,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.158167996790568,1.01659733563424,0.648032044930808,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.496375471371293,0.583353565032143,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.419437377702843,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.358053391334963,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.0974578807397524,0.0962118416403295,0.467507608726276,0.226730383615211,0.887943813496259,0.269141569828427,0.671538465456314,1.15913756419314,0.375364950902364,0.549454872801795,0,1.00314420807073,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,1.03787347584177,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.919217542250071,0.44449345560323,0.412070114477788,1.92551525755089,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.811190281613988,0,1.23625770240992,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.788035859004508,0,0.309873682371932,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.382576664137687,0,0.927471342481686 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.703943610758334,0.70219357896598,0.513653904676515,0,0,0,0.333109761815663,0,0,0.788655413395594,1.09691546884591,0.84877930359606,0,0.198581902401771,0,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0.755380907853464,0.304130793658544,1.65192076945513,1.56478268869608,2.39827672018491,4.39372365468944,5.8328969722285,2.09979632438044,7.18762821824858,0.503347818173209,0.725362142011344,0,1.28629718017973,0.286533439938757,2.06268836910977,0.809265843438391,0,0,0.677689064138264,0.889294796111139,0,0,0,1.49800055259202,1.15265491596466,0.311068836925433,0.405017814995072,0.630974884054146,0,0.883474163806454,1.22490799214954,0.383381884072945,0.919218786610021,0,0.255374676170375,0.307213066512487,0.659431438650969,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0,0.372798891650601,3.10477392666055,1.28471652181535,4.92769630792852,0,4.75979933595425,0,1.29955283489534,0,0.421333260395256,0.511290967734173,3.37721805983729,1.41335829804136,1.12674735821344,5.13305909657271,15.2883143823987,7.11066703153331,4.5463118612355,4.30711771307668,3.53867111510348,0,0.517875767294343,0.29688427812965,0.346970653532272,0.913396434936424,0.461230994512117,0.904335843315735,0.352766121407114,0.125666591329675,0.988779870937496,0.433798070759735,0,0.808834249737046,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0.239630249011841,0,0.254140454146129,0.299581278809645,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.712875546952214,0,0,0,0.390361328888111,0.459804208866946,1.44049703844279,0.150704817835715,0.408218994907967,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0.945530400839096,0.351902248327898,0.876782929710299,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.621377317606506,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,0.617068451549513,0.465067889500816,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.823236899034275,0,0.528901133327089,0.426576501070468,0.928946687441754,0.38660238396628,0.605050573870028,0.22237804384487,0,0,0.494096864172033,0,0,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.203651327845314,0.775809948670503,0.420814919341911,0.379419222745544,0.295220295959204,0.31399745568275,0.370191491765402,1.1858105083486,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0.863088412352432,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,0,0.189491411770485,0.651859905768103,0.678980343100753,0.469380496577004,0.670025029767263,0.714130922658041,1.75620283072019,0.630540576424764,1.10732344824387,0.956728611944923,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0.819674726883377,0,0.94652465824877,1.17131623288992,1.72338718186239,1.67278158566786,0.891194696329576,0.566153061577665,0.809621403349789,1.16902343164525,0.790575555893047,0,0.283880170416537,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,1.69946445308487,0.302323556964751,0.565815239267694,0.590603785761546,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.517434735131018,0,0.709360934569094,0.356737635204141,0.164549020602121,0.304464949114599,1.17335854031855,0.42366414172764,0.661585194164886,0.32977250588296,0.484393280087717,0.241251699712623,0.835606408021955,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.158167996790568,1.01659733563424,0.648032044930808,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.496375471371293,0.583353565032143,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0.419437377702843,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.358053391334963,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.0974578807397524,0.0962118416403295,0.467507608726276,0.226730383615211,0.887943813496259,0.269141569828427,0.671538465456314,1.15913756419314,0.375364950902364,0.549454872801795,0,1.00314420807073,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,1.03787347584177,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.919217542250071,0.44449345560323,0.412070114477788,1.92551525755089,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.811190281613988,0,1.23625770240992,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.788035859004508,0,0.309873682371932,0.771626443924566,0.499621155875892,0.467863216890817,0.429742108096597,0.382576664137687,0,0.927471342481686 | ||
|short_description=p@chr5:8912759..8912763,+ | |||
}} | }} |
Latest revision as of 17:26, 4 August 2015
Short description: | p@chr5:8912759..8912763, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:8912759..8912763, + |
Coexpression cluster: | MCL_coexpression_mm9:1047 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.00e-19 | 10 |
neuron associated cell | 2.00e-19 | 10 |
glial cell (sensu Vertebrata) | 2.00e-19 | 10 |
neuron associated cell (sensu Vertebrata) | 2.00e-19 | 10 |
glial cell | 2.00e-19 | 10 |
glioblast | 2.00e-19 | 10 |
glioblast (sensu Vertebrata) | 2.00e-19 | 10 |
embryonic cell | 3.46e-18 | 70 |
oligodendrocyte precursor cell | 5.14e-16 | 8 |
oligodendrocyte | 5.14e-13 | 6 |
macroglial cell | 5.14e-13 | 6 |
astrocyte | 5.14e-13 | 6 |
endodermal cell | 3.35e-09 | 20 |
epithelial cell | 3.04e-08 | 25 |
ectodermal cell | 6.36e-08 | 44 |
neurectodermal cell | 6.36e-08 | 44 |
epithelial cell of thymus | 8.00e-08 | 3 |
duct epithelial cell | 2.11e-07 | 3 |
epithelial cell of tracheobronchial tree | 2.11e-07 | 3 |
branched duct epithelial cell | 2.11e-07 | 3 |
epithelial cell of lower respiratory tract | 2.11e-07 | 3 |
respiratory epithelial cell | 2.11e-07 | 3 |
tracheal epithelial cell | 2.11e-07 | 3 |
tracheoblast | 2.11e-07 | 3 |
neural cell | 3.81e-07 | 43 |
barrier cell | 5.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.11e-07 | 3 |
respiratory airway | 2.11e-07 | 3 |
tracheobronchial tree | 2.11e-07 | 3 |
lower respiratory tract | 2.11e-07 | 3 |