FFCP PHASE1:Mm9::chr6:113384886..113384900,+: Difference between revisions
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|id=chr6:113384886..113384900,+
|short_description=p@chr6:113384886..113384900,+
|description=CAGE_peak_at_chr6:113384886..113384900,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=987 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:113384886..113384900,+ | |||
|description=CAGE_peak_at_chr6:113384886..113384900,+ | |||
|id=chr6:113384886..113384900,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.56e-09!6;CL:0000677!6.56e-09!6;CL:0000212!6.56e-09!6;CL:0000584!6.56e-09!6;CL:0002563!6.49e-08!9;CL:0002251!6.49e-08!9;CL:0000066!9.15e-08!25;CL:0000075!1.47e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.76e-14,6;CL:0000677,1.76e-14,6;CL:0000584,1.76e-14,6;CL:0000075,1.92e-12,7;CL:0002563,1.01e-09,9;CL:0002251,1.01e-09,9;CL:0000066,3.76e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.16e-22!59;UBERON:0000160!2.62e-18!43;UBERON:0004921!1.34e-10!126;UBERON:0004185!1.34e-10!126;UBERON:0001007!2.66e-10!128;UBERON:0001555!2.66e-10!128;UBERON:0007026!2.66e-10!128;UBERON:0004119!5.14e-10!130;UBERON:0000925!5.14e-10!130;UBERON:0006595!5.14e-10!130;UBERON:0001242!4.44e-09!13;UBERON:0000060!4.44e-09!13;UBERON:0001262!4.44e-09!13;UBERON:0004786!4.44e-09!13;UBERON:0003350!6.49e-08!9;UBERON:0004808!6.49e-08!9;UBERON:0001277!6.49e-08!9;UBERON:0000344!1.16e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.29e-27,31;UBERON:0005409,3.35e-20,47;UBERON:0001242,2.80e-10,13;UBERON:0001262,2.80e-10,13;UBERON:0004786,2.80e-10,13;UBERON:0003350,1.01e-09,9;UBERON:0004808,1.01e-09,9;UBERON:0001277,1.01e-09,9;UBERON:0000344,6.88e-09,15;UBERON:0004921,2.17e-08,114;UBERON:0001007,3.30e-08,116;UBERON:0001555,3.30e-08,116;UBERON:0007026,3.30e-08,116;UBERON:0004119,4.96e-08,118;UBERON:0000925,4.96e-08,118;UBERON:0006595,4.96e-08,118;UBERON:0000485,5.57e-08,11 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,2.41971369045464,2.50447864973174,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72269589234506,0.430761996159075,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,6.34681359992506,0,0,0.128867461322093,0,0.444756087689741,1.33157938278791,0.949058123089023,2.9645811850322,1.75934646160189,1.1937388322469,2.33956904542944,1.79763881730844,0.864552199498777,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.972811360650212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.41326727862668,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,2.41971369045464,2.50447864973174,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72269589234506,0.430761996159075,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,6.34681359992506,0,0,0.128867461322093,0,0.444756087689741,1.33157938278791,0.949058123089023,2.9645811850322,1.75934646160189,1.1937388322469,2.33956904542944,1.79763881730844,0.864552199498777,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.972811360650212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.41326727862668,0.26175594198403,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr6:113384886..113384900,+ | |||
}} | }} |
Latest revision as of 22:06, 4 August 2015
Short description: | p@chr6:113384886..113384900, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113384886..113384900, + |
Coexpression cluster: | MCL_coexpression_mm9:987 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.76e-14 | 6 |
gut absorptive cell | 1.76e-14 | 6 |
enterocyte | 1.76e-14 | 6 |
columnar/cuboidal epithelial cell | 1.92e-12 | 7 |
intestinal epithelial cell | 1.01e-09 | 9 |
epithelial cell of alimentary canal | 1.01e-09 | 9 |
epithelial cell | 3.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.29e-27 | 31 |
gastrointestinal system | 3.35e-20 | 47 |
intestinal mucosa | 2.80e-10 | 13 |
wall of intestine | 2.80e-10 | 13 |
gastrointestinal system mucosa | 2.80e-10 | 13 |
epithelium of mucosa | 1.01e-09 | 9 |
gastrointestinal system epithelium | 1.01e-09 | 9 |
intestinal epithelium | 1.01e-09 | 9 |
mucosa | 6.88e-09 | 15 |
subdivision of digestive tract | 2.17e-08 | 114 |
digestive system | 3.30e-08 | 116 |
digestive tract | 3.30e-08 | 116 |
primitive gut | 3.30e-08 | 116 |
endoderm-derived structure | 4.96e-08 | 118 |
endoderm | 4.96e-08 | 118 |
presumptive endoderm | 4.96e-08 | 118 |
simple columnar epithelium | 5.57e-08 | 11 |