FFCP PHASE1:Mm9::chr12:32808528..32808543,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=15|UniProt=|association_with_transcript=23bp_to_uc007nhz.1_5end|description=CAGE_peak_2_at_uc007nhz.1_5end|id=chr12:32808528..32808543,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.66e-08,3;CL:0002006,1.66e-08,3;CL:0002024,1.66e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!9.82e-09!49;UBERON:0005173!9.82e-09!49;UBERON:0002417!9.82e-09!49;UBERON:0000916!9.82e-09!49;UBERON:0002106!5.97e-07!6;UBERON:0004457!5.97e-07!6;UBERON:0000042!5.97e-07!6;UBERON:0004854!5.97e-07!6;UBERON:0009034!5.97e-07!6;UBERON:0002095!5.97e-07!6;UBERON:0004782!5.97e-07!6;UBERON:0003281!5.97e-07!6;UBERON:0009664!5.97e-07!6;UBERON:0002296!5.97e-07!6;UBERON:0005602!5.97e-07!6;UBERON:0001179!5.97e-07!6;UBERON:0006293!5.97e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.74e-11,6;UBERON:0004457,8.74e-11,6;UBERON:0000042,8.74e-11,6;UBERON:0004854,8.74e-11,6;UBERON:0009034,8.74e-11,6;UBERON:0002095,8.74e-11,6;UBERON:0004782,8.74e-11,6;UBERON:0003281,8.74e-11,6;UBERON:0009664,8.74e-11,6;UBERON:0002296,8.74e-11,6;UBERON:0005602,8.74e-11,6;UBERON:0001179,8.74e-11,6;UBERON:0006293,8.74e-11,6;UBERON:0002107,9.28e-10,22;UBERON:0007499,9.28e-10,22;UBERON:0006925,9.28e-10,22;UBERON:0009497,9.28e-10,22;UBERON:0000015,9.28e-10,22;UBERON:0002423,9.28e-10,22;UBERON:0006235,9.28e-10,22;UBERON:0008835,9.28e-10,22;UBERON:0003894,9.28e-10,22;UBERON:0004161,9.28e-10,22;UBERON:0008836,9.28e-10,22;UBERON:0005172,1.05e-09,49;UBERON:0005173,1.05e-09,49;UBERON:0002417,1.05e-09,49;UBERON:0000916,1.05e-09,49;UBERON:0009854,3.04e-09,23;UBERON:0009856,3.04e-09,23;UBERON:0003887,1.10e-08,10;UBERON:0002365,2.45e-08,25;UBERON:0002330,2.45e-08,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66219523631325,15.1856450542369,11.1929900500503,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.867426633830679,0.913396434936424,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0.289198713839823,6.19227386364912,0.808834249737046,4.63767188766826,3.87900202508178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11491850037158,0,0,0.130120442962704,0,0,1.05493372485001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0,0,0.0701358198903186,0,0,0,0,0,11.5123122944105,12.1866576970186,11.2431056192427,18.0545508035768,14.9529839046498,10.6942857748196,7.76779571117189,2.43202840162553,3.84385978463314,2.87536413054709,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,12.9861869406368,0.82554747185289,3.51869602002452,14.5043711893612,12.4391747226133,7.77845788902177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0.844780627453891,0,0.781226309063701,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.87806966329548,1.94485373654635,1.04806581313991,0,0.888986911206461,0.206035057238894,0.962757628775446,0.252697211763798,0.760437899670719,1.32038438970253,0.842773567228942,1.02440243847791,0.918967503289812,1.90517476513229,0.811190281613988,1.92909220463705,0.824171801606613,0.735994600671987,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.846984423737976,1.01537529470012,1.46342378298218,1.57841826862706,1.08643291076689,1.12228454331548,0.593175090620871,0.591026894253381,0.818462086339379,0.929621047115796,1.15743966588685,0,0.935726433781634,0.429742108096597,0,0.661774257358546,0.695603506861264|short_description=p2@uc007nhz.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=23bp_to_uc007nhz.1_5end | |||
|cluster_id=chr12:32808528..32808543,- | |||
|description=CAGE_peak_2_at_uc007nhz.1_5end | |||
|id=chr12:32808528..32808543,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.66e-08,3;CL:0002006,1.66e-08,3;CL:0002024,1.66e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!9.82e-09!49;UBERON:0005173!9.82e-09!49;UBERON:0002417!9.82e-09!49;UBERON:0000916!9.82e-09!49;UBERON:0002106!5.97e-07!6;UBERON:0004457!5.97e-07!6;UBERON:0000042!5.97e-07!6;UBERON:0004854!5.97e-07!6;UBERON:0009034!5.97e-07!6;UBERON:0002095!5.97e-07!6;UBERON:0004782!5.97e-07!6;UBERON:0003281!5.97e-07!6;UBERON:0009664!5.97e-07!6;UBERON:0002296!5.97e-07!6;UBERON:0005602!5.97e-07!6;UBERON:0001179!5.97e-07!6;UBERON:0006293!5.97e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.74e-11,6;UBERON:0004457,8.74e-11,6;UBERON:0000042,8.74e-11,6;UBERON:0004854,8.74e-11,6;UBERON:0009034,8.74e-11,6;UBERON:0002095,8.74e-11,6;UBERON:0004782,8.74e-11,6;UBERON:0003281,8.74e-11,6;UBERON:0009664,8.74e-11,6;UBERON:0002296,8.74e-11,6;UBERON:0005602,8.74e-11,6;UBERON:0001179,8.74e-11,6;UBERON:0006293,8.74e-11,6;UBERON:0002107,9.28e-10,22;UBERON:0007499,9.28e-10,22;UBERON:0006925,9.28e-10,22;UBERON:0009497,9.28e-10,22;UBERON:0000015,9.28e-10,22;UBERON:0002423,9.28e-10,22;UBERON:0006235,9.28e-10,22;UBERON:0008835,9.28e-10,22;UBERON:0003894,9.28e-10,22;UBERON:0004161,9.28e-10,22;UBERON:0008836,9.28e-10,22;UBERON:0005172,1.05e-09,49;UBERON:0005173,1.05e-09,49;UBERON:0002417,1.05e-09,49;UBERON:0000916,1.05e-09,49;UBERON:0009854,3.04e-09,23;UBERON:0009856,3.04e-09,23;UBERON:0003887,1.10e-08,10;UBERON:0002365,2.45e-08,25;UBERON:0002330,2.45e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66219523631325,15.1856450542369,11.1929900500503,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.867426633830679,0.913396434936424,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0.289198713839823,6.19227386364912,0.808834249737046,4.63767188766826,3.87900202508178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11491850037158,0,0,0.130120442962704,0,0,1.05493372485001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0,0,0.0701358198903186,0,0,0,0,0,11.5123122944105,12.1866576970186,11.2431056192427,18.0545508035768,14.9529839046498,10.6942857748196,7.76779571117189,2.43202840162553,3.84385978463314,2.87536413054709,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,12.9861869406368,0.82554747185289,3.51869602002452,14.5043711893612,12.4391747226133,7.77845788902177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0.844780627453891,0,0.781226309063701,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.87806966329548,1.94485373654635,1.04806581313991,0,0.888986911206461,0.206035057238894,0.962757628775446,0.252697211763798,0.760437899670719,1.32038438970253,0.842773567228942,1.02440243847791,0.918967503289812,1.90517476513229,0.811190281613988,1.92909220463705,0.824171801606613,0.735994600671987,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.846984423737976,1.01537529470012,1.46342378298218,1.57841826862706,1.08643291076689,1.12228454331548,0.593175090620871,0.591026894253381,0.818462086339379,0.929621047115796,1.15743966588685,0,0.935726433781634,0.429742108096597,0,0.661774257358546,0.695603506861264 | |||
|short_description=p2@uc007nhz.1 | |||
}} |
Latest revision as of 23:36, 4 August 2015
Short description: | p2@uc007nhz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc007nhz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 23bp_to_uc007nhz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.66e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.66e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.66e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.74e-11 | 6 |
cavity lining | 8.74e-11 | 6 |
serous membrane | 8.74e-11 | 6 |
gastrointestinal system mesentery | 8.74e-11 | 6 |
stomach region | 8.74e-11 | 6 |
mesentery | 8.74e-11 | 6 |
gastrointestinal system serosa | 8.74e-11 | 6 |
mesentery of stomach | 8.74e-11 | 6 |
gut mesentery | 8.74e-11 | 6 |
dorsal mesentery | 8.74e-11 | 6 |
dorsal mesogastrium | 8.74e-11 | 6 |
peritoneal cavity | 8.74e-11 | 6 |
spleen primordium | 8.74e-11 | 6 |
liver | 9.28e-10 | 22 |
epithelial sac | 9.28e-10 | 22 |
digestive gland | 9.28e-10 | 22 |
epithelium of foregut-midgut junction | 9.28e-10 | 22 |
anatomical boundary | 9.28e-10 | 22 |
hepatobiliary system | 9.28e-10 | 22 |
foregut-midgut junction | 9.28e-10 | 22 |
hepatic diverticulum | 9.28e-10 | 22 |
liver primordium | 9.28e-10 | 22 |
septum transversum | 9.28e-10 | 22 |
liver bud | 9.28e-10 | 22 |
abdomen element | 1.05e-09 | 49 |
abdominal segment element | 1.05e-09 | 49 |
abdominal segment of trunk | 1.05e-09 | 49 |
abdomen | 1.05e-09 | 49 |
digestive tract diverticulum | 3.04e-09 | 23 |
sac | 3.04e-09 | 23 |
intraembryonic coelom | 1.10e-08 | 10 |
exocrine gland | 2.45e-08 | 25 |
exocrine system | 2.45e-08 | 25 |