FFCP PHASE1:Mm9::chr17:48594216..48594232,+: Difference between revisions
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{{FFCP|EntrezGene=76589|HGNC=|MCL_coexpression_id=24|UniProt=E9QLC2,Q6R653|association_with_transcript=0bp_to_ENSMUST00000074574,ENSMUST00000076852,NM_152823,uc008cxz.2_5end|description=CAGE_peak_1_at_Unc5cl_5end|id=chr17:48594216..48594232,+|ontology_enrichment_celltype=CL:0002563!2.00e-07!9;CL:0002251!2.00e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,6.46e-09,9;CL:0002251,6.46e-09,9;CL:0000239,7.78e-07,6;CL:0000677,7.78e-07,6;CL:0000584,7.78e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.20e-27!59;UBERON:0000160!3.03e-21!43;UBERON:0004923!3.26e-12!24;UBERON:0000344!2.27e-11!15;UBERON:0004119!2.19e-10!130;UBERON:0000925!2.19e-10!130;UBERON:0006595!2.19e-10!130;UBERON:0001007!3.00e-10!128;UBERON:0001555!3.00e-10!128;UBERON:0007026!3.00e-10!128;UBERON:0001242!3.26e-10!13;UBERON:0000060!3.26e-10!13;UBERON:0001262!3.26e-10!13;UBERON:0004786!3.26e-10!13;UBERON:0004921!2.07e-09!126;UBERON:0004185!2.07e-09!126;UBERON:0003350!2.00e-07!9;UBERON:0004808!2.00e-07!9;UBERON:0001277!2.00e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.36e-31,47;UBERON:0000160,4.07e-26,31;UBERON:0000344,7.41e-14,15;UBERON:0004923,9.06e-13,24;UBERON:0001242,2.09e-12,13;UBERON:0001262,2.09e-12,13;UBERON:0004786,2.09e-12,13;UBERON:0001007,4.72e-10,116;UBERON:0001555,4.72e-10,116;UBERON:0007026,4.72e-10,116;UBERON:0004119,1.46e-09,118;UBERON:0000925,1.46e-09,118;UBERON:0006595,1.46e-09,118;UBERON:0004921,4.18e-09,114;UBERON:0003350,6.46e-09,9;UBERON:0004808,6.46e-09,9;UBERON:0001277,6.46e-09,9;UBERON:0000945,9.29e-07,16;UBERON:0010039,9.29e-07,16|phase1_expression=0,105.739548514726,120.119799198838,146.997606695119,175.313505481222,44.8237656004746,36.443571932902,0,0,0,0,0,0,0,1.66554880907831,2.42970320867791,0.699561878128147,0.315462165358238,0,0,13.8620562946244,0,0,32.3184694042681,34.1819828790083,71.7789955143775,83.9985892510196,71.3209780190293,47.6958782835498,64.7717433483022,54.7674361318603,0,0,0,31.4848265528889,26.5975432573588,34.7087905646028,0.418531630736908,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,3.45796474789399,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.837548997004143,1.12552522006336,0.45839474333043,0.294628585473668,0,0,0,0,7.8263411949453,0,0,0,0,0,3.5111105032938,0,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,11.418387971906,0,0,0,0,0.691846491768175,0,0.117588707135705,0.125666591329675,13.1013332899218,0,0,0.647067399789637,0.662524555381181,1.45462575940567,7.45567044872489,0.585561594023094,0.41889341362691,66.1633772990252,0,0,0,1.79748767285787,0,0.125654352112864,0.521472960576829,0.255715457330331,0.62336413367868,0.811206315338788,2.85150218780886,2.23932547098167,1.76905930903572,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,168.513579321737,67.6993450658673,1.06644125267617,8.82499353069666,28.4797089521826,46.7905777126155,49.1455476897163,36.9037714658365,65.9595395546871,31.4575003522861,44.737667166448,38.0006861598598,37.8230329011093,70.1079138750293,43.2276099749388,40.4256784706365,1.51734320762465,3.54170389090159,4.50830942692322,5.29493452397817,4.46090720485539,5.19005067188357,2.33975187359752,0,0.156998727841375,0.123397163921801,0,2.8363667971736,4.32429789249047,5.39669069723649,6.28866376304359,5.06472035480075,5.60176873919124,2.30156909960649,0.486405680325106,0.274561413188081,0,1.11642284300551,0,0,0,0,0,0.189491411770485,0,0.678980343100753,1.64283173801951,1.00503754465089,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0,0,0,0,2.75936746304733,1.12385412991454,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,8.23252494207958,0.890328018336276,0.651547837414304,11.0529982391599,0,0.728341908464944,1.209294227859,0.565815239267694,1.47650946440386,1.53717573971964,12.4045580720746,3.63533729477506,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,0,0.36012218806262,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0.164140899745061,51.5921080834836,0.370850604021019,1.53783792718067,0.412773735926445,1.66675074632741,4.89757988212197,2.32380187125743,4.57556346413045,0.169978429993855,0.139951452323658,0,2.86401185404534,1.58167996790568,6.70954241518601,10.9085394230019,6.48173717644853,8.07941485860857,3.2367443132357,3.05817786183743,2.09404753587224,4.27729411862916,0.621339313086926,0,0,0,0,0.516639293910924,0,0.58678619322877,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0,2.25218970541418,132.6017759695,4.93047271881851,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.512200817262403,4.37592090722929,0.628839487883947,1.2869045591501,2.00022055021454,3.09052585858341,1.92551525755089,1.51618327058278,1.77435509923168,3.2066478035633,2.34103768674706,1.98477972455095,3.61843454420364,2.38146845641537,2.54945517078682,2.12200142510076,2.88460130562315,2.94397840268795,1.02860775715625,2.48466128623072,1.1921809497366,1.74415699958794,2.1645157495526,2.36920902096694,1.28049581010941,2.36762740294059,2.98769050460896,1.12228454331548,2.96587545310435,2.56111654176465,1.22769312950907,2.78886314134739,2.50778594275484,0,2.10538447600868,3.00819475667618,0,0.220591419119515,0.231867835620421|short_description=p1@Unc5cl}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76589 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QLC2,uniprot:Q6R653 | |||
|association_with_transcript=0bp_to_ENSMUST00000074574,ENSMUST00000076852,NM_152823,uc008cxz.2_5end | |||
|cluster_id=chr17:48594216..48594232,+ | |||
|description=CAGE_peak_1_at_Unc5cl_5end | |||
|id=chr17:48594216..48594232,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.00e-07!9;CL:0002251!2.00e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.46e-09,9;CL:0002251,6.46e-09,9;CL:0000239,7.78e-07,6;CL:0000677,7.78e-07,6;CL:0000584,7.78e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.20e-27!59;UBERON:0000160!3.03e-21!43;UBERON:0004923!3.26e-12!24;UBERON:0000344!2.27e-11!15;UBERON:0004119!2.19e-10!130;UBERON:0000925!2.19e-10!130;UBERON:0006595!2.19e-10!130;UBERON:0001007!3.00e-10!128;UBERON:0001555!3.00e-10!128;UBERON:0007026!3.00e-10!128;UBERON:0001242!3.26e-10!13;UBERON:0000060!3.26e-10!13;UBERON:0001262!3.26e-10!13;UBERON:0004786!3.26e-10!13;UBERON:0004921!2.07e-09!126;UBERON:0004185!2.07e-09!126;UBERON:0003350!2.00e-07!9;UBERON:0004808!2.00e-07!9;UBERON:0001277!2.00e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.36e-31,47;UBERON:0000160,4.07e-26,31;UBERON:0000344,7.41e-14,15;UBERON:0004923,9.06e-13,24;UBERON:0001242,2.09e-12,13;UBERON:0001262,2.09e-12,13;UBERON:0004786,2.09e-12,13;UBERON:0001007,4.72e-10,116;UBERON:0001555,4.72e-10,116;UBERON:0007026,4.72e-10,116;UBERON:0004119,1.46e-09,118;UBERON:0000925,1.46e-09,118;UBERON:0006595,1.46e-09,118;UBERON:0004921,4.18e-09,114;UBERON:0003350,6.46e-09,9;UBERON:0004808,6.46e-09,9;UBERON:0001277,6.46e-09,9;UBERON:0000945,9.29e-07,16;UBERON:0010039,9.29e-07,16 | |||
|phase1_expression=0,105.739548514726,120.119799198838,146.997606695119,175.313505481222,44.8237656004746,36.443571932902,0,0,0,0,0,0,0,1.66554880907831,2.42970320867791,0.699561878128147,0.315462165358238,0,0,13.8620562946244,0,0,32.3184694042681,34.1819828790083,71.7789955143775,83.9985892510196,71.3209780190293,47.6958782835498,64.7717433483022,54.7674361318603,0,0,0,31.4848265528889,26.5975432573588,34.7087905646028,0.418531630736908,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,3.45796474789399,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.837548997004143,1.12552522006336,0.45839474333043,0.294628585473668,0,0,0,0,7.8263411949453,0,0,0,0,0,3.5111105032938,0,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,11.418387971906,0,0,0,0,0.691846491768175,0,0.117588707135705,0.125666591329675,13.1013332899218,0,0,0.647067399789637,0.662524555381181,1.45462575940567,7.45567044872489,0.585561594023094,0.41889341362691,66.1633772990252,0,0,0,1.79748767285787,0,0.125654352112864,0.521472960576829,0.255715457330331,0.62336413367868,0.811206315338788,2.85150218780886,2.23932547098167,1.76905930903572,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,168.513579321737,67.6993450658673,1.06644125267617,8.82499353069666,28.4797089521826,46.7905777126155,49.1455476897163,36.9037714658365,65.9595395546871,31.4575003522861,44.737667166448,38.0006861598598,37.8230329011093,70.1079138750293,43.2276099749388,40.4256784706365,1.51734320762465,3.54170389090159,4.50830942692322,5.29493452397817,4.46090720485539,5.19005067188357,2.33975187359752,0,0.156998727841375,0.123397163921801,0,2.8363667971736,4.32429789249047,5.39669069723649,6.28866376304359,5.06472035480075,5.60176873919124,2.30156909960649,0.486405680325106,0.274561413188081,0,1.11642284300551,0,0,0,0,0,0.189491411770485,0,0.678980343100753,1.64283173801951,1.00503754465089,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.518054945597687,0,0,0,0,2.75936746304733,1.12385412991454,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,8.23252494207958,0.890328018336276,0.651547837414304,11.0529982391599,0,0.728341908464944,1.209294227859,0.565815239267694,1.47650946440386,1.53717573971964,12.4045580720746,3.63533729477506,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,0,0.36012218806262,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0.164140899745061,51.5921080834836,0.370850604021019,1.53783792718067,0.412773735926445,1.66675074632741,4.89757988212197,2.32380187125743,4.57556346413045,0.169978429993855,0.139951452323658,0,2.86401185404534,1.58167996790568,6.70954241518601,10.9085394230019,6.48173717644853,8.07941485860857,3.2367443132357,3.05817786183743,2.09404753587224,4.27729411862916,0.621339313086926,0,0,0,0,0.516639293910924,0,0.58678619322877,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0,2.25218970541418,132.6017759695,4.93047271881851,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.512200817262403,4.37592090722929,0.628839487883947,1.2869045591501,2.00022055021454,3.09052585858341,1.92551525755089,1.51618327058278,1.77435509923168,3.2066478035633,2.34103768674706,1.98477972455095,3.61843454420364,2.38146845641537,2.54945517078682,2.12200142510076,2.88460130562315,2.94397840268795,1.02860775715625,2.48466128623072,1.1921809497366,1.74415699958794,2.1645157495526,2.36920902096694,1.28049581010941,2.36762740294059,2.98769050460896,1.12228454331548,2.96587545310435,2.56111654176465,1.22769312950907,2.78886314134739,2.50778594275484,0,2.10538447600868,3.00819475667618,0,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Unc5cl | |||
}} |
Revision as of 01:30, 5 August 2015
Short description: | p1@Unc5cl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Unc5cl_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000074574, ENSMUST00000076852, NM_152823, uc008cxz.2_5end |
EntrezGene: | 76589 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.46e-09 | 9 |
epithelial cell of alimentary canal | 6.46e-09 | 9 |
brush border epithelial cell | 7.78e-07 | 6 |
gut absorptive cell | 7.78e-07 | 6 |
enterocyte | 7.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.36e-31 | 47 |
intestine | 4.07e-26 | 31 |
mucosa | 7.41e-14 | 15 |
organ component layer | 9.06e-13 | 24 |
intestinal mucosa | 2.09e-12 | 13 |
wall of intestine | 2.09e-12 | 13 |
gastrointestinal system mucosa | 2.09e-12 | 13 |
digestive system | 4.72e-10 | 116 |
digestive tract | 4.72e-10 | 116 |
primitive gut | 4.72e-10 | 116 |
endoderm-derived structure | 1.46e-09 | 118 |
endoderm | 1.46e-09 | 118 |
presumptive endoderm | 1.46e-09 | 118 |
subdivision of digestive tract | 4.18e-09 | 114 |
epithelium of mucosa | 6.46e-09 | 9 |
gastrointestinal system epithelium | 6.46e-09 | 9 |
intestinal epithelium | 6.46e-09 | 9 |
stomach | 9.29e-07 | 16 |
food storage organ | 9.29e-07 | 16 |