FFCP PHASE1:Mm9::chr17:50439683..50439689,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:50439683..50439689,- to FFCP PHASE1:Mm9::chr17:50439683..50439689,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:50439683..50439689,- | |||
|description=CAGE_peak_at_chr17:50439683..50439689,- | |||
|id=chr17:50439683..50439689,- | |||
|ontology_enrichment_celltype=CL:0000473!1.91e-20!3;CL:0000627!1.91e-20!3;CL:0000682!1.91e-20!3;CL:0000239!1.41e-17!6;CL:0000677!1.41e-17!6;CL:0000212!1.41e-17!6;CL:0000584!1.41e-17!6;CL:0000075!4.14e-15!7;CL:0000066!2.75e-12!25;CL:0002563!8.23e-12!9;CL:0002251!8.23e-12!9;CL:0002076!3.65e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,7.32e-24,6;CL:0000677,7.32e-24,6;CL:0000584,7.32e-24,6;CL:0000075,1.60e-20,7;CL:0000066,3.30e-17,25;CL:0002563,4.63e-16,9;CL:0002251,4.63e-16,9;CL:0000473,3.13e-12,7;CL:0002076,8.81e-10,15;CL:0000223,2.08e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.53e-20!15;UBERON:0001962!2.26e-13!2;UBERON:0001961!2.26e-13!2;UBERON:0001744!2.26e-13!2;UBERON:0004923!1.62e-12!24;UBERON:0001242!2.08e-12!13;UBERON:0000060!2.08e-12!13;UBERON:0001262!2.08e-12!13;UBERON:0004786!2.08e-12!13;UBERON:0003350!8.23e-12!9;UBERON:0004808!8.23e-12!9;UBERON:0001277!8.23e-12!9;UBERON:0000485!1.05e-09!11;UBERON:0002465!3.19e-09!3;UBERON:0003199!1.53e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.53e-28,15;UBERON:0001962,7.90e-18,2;UBERON:0001961,7.90e-18,2;UBERON:0001744,7.90e-18,2;UBERON:0004923,1.69e-17,24;UBERON:0001242,4.98e-17,13;UBERON:0001262,4.98e-17,13;UBERON:0004786,4.98e-17,13;UBERON:0003350,4.63e-16,9;UBERON:0004808,4.63e-16,9;UBERON:0001277,4.63e-16,9;UBERON:0000485,3.26e-13,11;UBERON:0002465,3.16e-12,3;UBERON:0003199,8.42e-10,1;UBERON:0000160,3.43e-07,31 | |||
|phase1_expression=0,6.97950815278722,5.91499011206397,0,0,3.69334398206158,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.52350209173887,6.89078356938024,4.73838195774982,7.32602191132023,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.97950815278722,5.91499011206397,0,0,3.69334398206158,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.52350209173887,6.89078356938024,4.73838195774982,7.32602191132023,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:50439683..50439689,- | |||
}} | }} |
Latest revision as of 01:46, 5 August 2015
Short description: | p@chr17:50439683..50439689, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:50439683..50439689, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.37e-27 | 3 |
brush border epithelial cell | 7.32e-24 | 6 |
gut absorptive cell | 7.32e-24 | 6 |
enterocyte | 7.32e-24 | 6 |
columnar/cuboidal epithelial cell | 1.60e-20 | 7 |
epithelial cell | 3.30e-17 | 25 |
intestinal epithelial cell | 4.63e-16 | 9 |
epithelial cell of alimentary canal | 4.63e-16 | 9 |
defensive cell | 3.13e-12 | 7 |
endo-epithelial cell | 8.81e-10 | 15 |
endodermal cell | 2.08e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.53e-28 | 15 |
gut-associated lymphoid tissue | 7.90e-18 | 2 |
mucosa-associated lymphoid tissue | 7.90e-18 | 2 |
lymphoid tissue | 7.90e-18 | 2 |
organ component layer | 1.69e-17 | 24 |
intestinal mucosa | 4.98e-17 | 13 |
wall of intestine | 4.98e-17 | 13 |
gastrointestinal system mucosa | 4.98e-17 | 13 |
epithelium of mucosa | 4.63e-16 | 9 |
gastrointestinal system epithelium | 4.63e-16 | 9 |
intestinal epithelium | 4.63e-16 | 9 |
simple columnar epithelium | 3.26e-13 | 11 |
lymphoid system | 3.16e-12 | 3 |
egg chamber | 8.42e-10 | 1 |
intestine | 3.43e-07 | 31 |