FFCP PHASE1:Mm9::chr2:38469247..38469270,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38469247..38469270,- | |||
|description=CAGE_peak_at_chr2:38469247..38469270,- | |description=CAGE_peak_at_chr2:38469247..38469270,- | ||
|id=chr2:38469247..38469270,- | |id=chr2:38469247..38469270,- | ||
|ontology_enrichment_celltype=CL:0000473!2.80e-09!3;CL:0000627!2.80e-09!3;CL:0000682!2.80e-09!3;CL:0000239!1.20e-07!6;CL:0000677!1.20e-07!6;CL:0000212!1.20e-07!6;CL:0000584!1.20e-07!6 | |ontology_enrichment_celltype=CL:0000473!2.80e-09!3;CL:0000627!2.80e-09!3;CL:0000682!2.80e-09!3;CL:0000239!1.20e-07!6;CL:0000677!1.20e-07!6;CL:0000212!1.20e-07!6;CL:0000584!1.20e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,1.25e-23,6;CL:0000677,1.25e-23,6;CL:0000584,1.25e-23,6;CL:0000075,2.53e-20,7;CL:0000066,4.14e-17,25;CL:0002563,6.61e-16,9;CL:0002251,6.61e-16,9;CL:0000473,3.13e-12,7;CL:0002076,1.09e-09,15;CL:0000223,2.44e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!6.11e-09!3;UBERON:0000344!3.90e-08!15 | |ontology_enrichment_uberon=UBERON:0002465!6.11e-09!3;UBERON:0000344!3.90e-08!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.91e-26,3;UBERON:0000344,7.11e-21,15;UBERON:0001962,1.94e-18,2;UBERON:0001961,1.94e-18,2;UBERON:0001744,1.94e-18,2;UBERON:0003350,6.61e-16,9;UBERON:0004808,6.61e-16,9;UBERON:0001277,6.61e-16,9;UBERON:0000485,4.36e-13,11;UBERON:0004923,4.88e-13,24;UBERON:0001242,3.95e-11,13;UBERON:0001262,3.95e-11,13;UBERON:0004786,3.95e-11,13;UBERON:0003199,5.62e-10,1;UBERON:0000029,1.03e-09,1;UBERON:0001097,1.03e-09,1;UBERON:0003968,1.03e-09,1;UBERON:0001467,1.03e-09,1 | |||
|phase1_expression=0,18.8446720125255,59.6049003600292,0,0,15.277013743982,16.3528848416868,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,27.0387194520857,18.8115610475079,43.0673973086265,55.9990595006797,37.0610520219729,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.66088190564909,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,18.8446720125255,59.6049003600292,0,0,15.277013743982,16.3528848416868,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,27.0387194520857,18.8115610475079,43.0673973086265,55.9990595006797,37.0610520219729,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.66088190564909,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:38469247..38469270,- | |short_description=p@chr2:38469247..38469270,- | ||
}} | }} |
Latest revision as of 03:56, 5 August 2015
Short description: | p@chr2:38469247..38469270, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38469247..38469270, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.37e-27 | 3 |
brush border epithelial cell | 1.25e-23 | 6 |
gut absorptive cell | 1.25e-23 | 6 |
enterocyte | 1.25e-23 | 6 |
columnar/cuboidal epithelial cell | 2.53e-20 | 7 |
epithelial cell | 4.14e-17 | 25 |
intestinal epithelial cell | 6.61e-16 | 9 |
epithelial cell of alimentary canal | 6.61e-16 | 9 |
defensive cell | 3.13e-12 | 7 |
endo-epithelial cell | 1.09e-09 | 15 |
endodermal cell | 2.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.91e-26 | 3 |
mucosa | 7.11e-21 | 15 |
gut-associated lymphoid tissue | 1.94e-18 | 2 |
mucosa-associated lymphoid tissue | 1.94e-18 | 2 |
lymphoid tissue | 1.94e-18 | 2 |
epithelium of mucosa | 6.61e-16 | 9 |
gastrointestinal system epithelium | 6.61e-16 | 9 |
intestinal epithelium | 6.61e-16 | 9 |
simple columnar epithelium | 4.36e-13 | 11 |
organ component layer | 4.88e-13 | 24 |
intestinal mucosa | 3.95e-11 | 13 |
wall of intestine | 3.95e-11 | 13 |
gastrointestinal system mucosa | 3.95e-11 | 13 |
egg chamber | 5.62e-10 | 1 |
lymph node | 1.03e-09 | 1 |
axillary lymph node | 1.03e-09 | 1 |
peripheral lymph node | 1.03e-09 | 1 |
shoulder | 1.03e-09 | 1 |