FFCP PHASE1:Mm9::chr2:38469278..38469287,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38469278..38469287,- | |||
|description=CAGE_peak_at_chr2:38469278..38469287,- | |description=CAGE_peak_at_chr2:38469278..38469287,- | ||
|id=chr2:38469278..38469287,- | |id=chr2:38469278..38469287,- | ||
|ontology_enrichment_celltype=CL:0000473!8.04e-22!3;CL:0000627!8.04e-22!3;CL:0000682!8.04e-22!3;CL:0000239!1.80e-18!6;CL:0000677!1.80e-18!6;CL:0000212!1.80e-18!6;CL:0000584!1.80e-18!6;CL:0000075!6.98e-16!7;CL:0000066!4.19e-13!25;CL:0002563!2.02e-12!9;CL:0002251!2.02e-12!9;CL:0002076!1.51e-07!15 | |ontology_enrichment_celltype=CL:0000473!8.04e-22!3;CL:0000627!8.04e-22!3;CL:0000682!8.04e-22!3;CL:0000239!1.80e-18!6;CL:0000677!1.80e-18!6;CL:0000212!1.80e-18!6;CL:0000584!1.80e-18!6;CL:0000075!6.98e-16!7;CL:0000066!4.19e-13!25;CL:0002563!2.02e-12!9;CL:0002251!2.02e-12!9;CL:0002076!1.51e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.30e-30,3;CL:0000239,7.55e-26,6;CL:0000677,7.55e-26,6;CL:0000584,7.55e-26,6;CL:0000075,3.10e-22,7;CL:0000066,6.33e-19,25;CL:0002563,2.08e-17,9;CL:0002251,2.08e-17,9;CL:0000473,1.91e-13,7;CL:0002076,1.29e-10,15;CL:0000223,4.76e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!3.91e-21!3;UBERON:0000344!3.09e-16!15;UBERON:0001962!6.53e-15!2;UBERON:0001961!6.53e-15!2;UBERON:0001744!6.53e-15!2;UBERON:0003350!2.02e-12!9;UBERON:0004808!2.02e-12!9;UBERON:0001277!2.02e-12!9;UBERON:0000485!3.27e-10!11;UBERON:0004923!4.72e-10!24;UBERON:0001242!1.12e-08!13;UBERON:0000060!1.12e-08!13;UBERON:0001262!1.12e-08!13;UBERON:0004786!1.12e-08!13;UBERON:0003199!4.10e-08!1;UBERON:0000029!6.57e-08!1;UBERON:0001097!6.57e-08!1;UBERON:0003968!6.57e-08!1;UBERON:0008785!6.57e-08!1;UBERON:0001467!6.57e-08!1;UBERON:0001421!6.57e-08!1 | |ontology_enrichment_uberon=UBERON:0002465!3.91e-21!3;UBERON:0000344!3.09e-16!15;UBERON:0001962!6.53e-15!2;UBERON:0001961!6.53e-15!2;UBERON:0001744!6.53e-15!2;UBERON:0003350!2.02e-12!9;UBERON:0004808!2.02e-12!9;UBERON:0001277!2.02e-12!9;UBERON:0000485!3.27e-10!11;UBERON:0004923!4.72e-10!24;UBERON:0001242!1.12e-08!13;UBERON:0000060!1.12e-08!13;UBERON:0001262!1.12e-08!13;UBERON:0004786!1.12e-08!13;UBERON:0003199!4.10e-08!1;UBERON:0000029!6.57e-08!1;UBERON:0001097!6.57e-08!1;UBERON:0003968!6.57e-08!1;UBERON:0008785!6.57e-08!1;UBERON:0001467!6.57e-08!1;UBERON:0001421!6.57e-08!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.20e-23,15;UBERON:0001962,1.59e-20,2;UBERON:0001961,1.59e-20,2;UBERON:0001744,1.59e-20,2;UBERON:0003350,2.08e-17,9;UBERON:0004808,2.08e-17,9;UBERON:0001277,2.08e-17,9;UBERON:0004923,1.80e-14,24;UBERON:0000485,2.51e-14,11;UBERON:0002465,4.93e-14,3;UBERON:0001242,3.45e-12,13;UBERON:0001262,3.45e-12,13;UBERON:0004786,3.45e-12,13;UBERON:0003199,7.19e-11,1 | |||
|phase1_expression=0,3.83872948403297,5.45999087267443,0,0,2.68606835059024,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55968933452967,3.67054849707472,5.7423196411502,7.32295393470427,5.38678081714723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.83872948403297,5.45999087267443,0,0,2.68606835059024,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55968933452967,3.67054849707472,5.7423196411502,7.32295393470427,5.38678081714723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:38469278..38469287,- | |short_description=p@chr2:38469278..38469287,- | ||
}} | }} |
Latest revision as of 03:56, 5 August 2015
Short description: | p@chr2:38469278..38469287, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38469278..38469287, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.30e-30 | 3 |
brush border epithelial cell | 7.55e-26 | 6 |
gut absorptive cell | 7.55e-26 | 6 |
enterocyte | 7.55e-26 | 6 |
columnar/cuboidal epithelial cell | 3.10e-22 | 7 |
epithelial cell | 6.33e-19 | 25 |
intestinal epithelial cell | 2.08e-17 | 9 |
epithelial cell of alimentary canal | 2.08e-17 | 9 |
defensive cell | 1.91e-13 | 7 |
endo-epithelial cell | 1.29e-10 | 15 |
endodermal cell | 4.76e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.20e-23 | 15 |
gut-associated lymphoid tissue | 1.59e-20 | 2 |
mucosa-associated lymphoid tissue | 1.59e-20 | 2 |
lymphoid tissue | 1.59e-20 | 2 |
epithelium of mucosa | 2.08e-17 | 9 |
gastrointestinal system epithelium | 2.08e-17 | 9 |
intestinal epithelium | 2.08e-17 | 9 |
organ component layer | 1.80e-14 | 24 |
simple columnar epithelium | 2.51e-14 | 11 |
lymphoid system | 4.93e-14 | 3 |
intestinal mucosa | 3.45e-12 | 13 |
wall of intestine | 3.45e-12 | 13 |
gastrointestinal system mucosa | 3.45e-12 | 13 |
egg chamber | 7.19e-11 | 1 |