FFCP PHASE1:Mm9::chr12:73729838..73729853,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=779 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:73729838..73729853,- | |||
|description=CAGE_peak_at_chr12:73729838..73729853,- | |description=CAGE_peak_at_chr12:73729838..73729853,- | ||
|id=chr12:73729838..73729853,- | |id=chr12:73729838..73729853,- | ||
|ontology_enrichment_celltype=CL:0000181!4.43e-26!5;CL:0000417!4.43e-26!5;CL:0000668!4.43e-26!5;CL:0000412!4.43e-26!5;CL:0000182!4.43e-26!5;CL:0000414!4.53e-12!11;CL:0000057!3.04e-09!1;CL:0000632!3.04e-09!1;CL:0000223!9.31e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.37e-35,5;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1;CL:0000223,4.00e-09,20;CL:0000066,2.27e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.65e-23!22;UBERON:0007499!9.65e-23!22;UBERON:0006925!9.65e-23!22;UBERON:0009497!9.65e-23!22;UBERON:0000015!9.65e-23!22;UBERON:0002423!9.65e-23!22;UBERON:0006235!9.65e-23!22;UBERON:0008835!9.65e-23!22;UBERON:0003894!9.65e-23!22;UBERON:0004161!9.65e-23!22;UBERON:0008836!9.65e-23!22;UBERON:0009854!9.76e-22!23;UBERON:0009856!9.76e-22!23;UBERON:0002365!5.74e-20!25;UBERON:0002330!5.74e-20!25;UBERON:0005256!3.97e-13!47;UBERON:0005172!1.44e-12!49;UBERON:0005173!1.44e-12!49;UBERON:0002417!1.44e-12!49;UBERON:0000916!1.44e-12!49;UBERON:0003914!2.13e-10!47;UBERON:0002368!3.82e-10!60;UBERON:0005057!1.54e-09!51;UBERON:0002530!2.60e-09!65;UBERON:0009569!3.69e-09!66;UBERON:0003929!8.37e-09!55;UBERON:0000949!2.45e-08!72;UBERON:0000490!3.10e-07!66;UBERON:0005177!6.03e-07!85;UBERON:0005911!6.81e-07!69;UBERON:0002405!8.73e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.25e-18,22;UBERON:0007499,6.25e-18,22;UBERON:0006925,6.25e-18,22;UBERON:0009497,6.25e-18,22;UBERON:0000015,6.25e-18,22;UBERON:0002423,6.25e-18,22;UBERON:0006235,6.25e-18,22;UBERON:0008835,6.25e-18,22;UBERON:0003894,6.25e-18,22;UBERON:0004161,6.25e-18,22;UBERON:0008836,6.25e-18,22;UBERON:0009854,3.69e-17,23;UBERON:0009856,3.69e-17,23;UBERON:0002365,8.45e-16,25;UBERON:0002330,8.45e-16,25;UBERON:0005256,8.21e-09,45;UBERON:0003914,1.95e-08,47;UBERON:0005172,4.30e-08,49;UBERON:0005173,4.30e-08,49;UBERON:0002417,4.30e-08,49;UBERON:0000916,4.30e-08,49;UBERON:0003929,3.31e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,4.0798280022465,16.1910957491345,9.74664626171504,9.85659151614138,15.870219474888,0,0,0,0,0,0,0,0,0,0,13.9304333257253,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.941715335802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,4.0798280022465,16.1910957491345,9.74664626171504,9.85659151614138,15.870219474888,0,0,0,0,0,0,0,0,0,0,13.9304333257253,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.941715335802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:73729838..73729853,- | |short_description=p@chr12:73729838..73729853,- | ||
}} | }} |
Latest revision as of 05:06, 5 August 2015
Short description: | p@chr12:73729838..73729853, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73729838..73729853, - |
Coexpression cluster: | MCL_coexpression_mm9:779 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.37e-35 | 5 |
fibroblast | 5.53e-12 | 1 |
hepatic stellate cell | 5.53e-12 | 1 |
endodermal cell | 4.00e-09 | 20 |
epithelial cell | 2.27e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 6.25e-18 | 22 |
epithelial sac | 6.25e-18 | 22 |
digestive gland | 6.25e-18 | 22 |
epithelium of foregut-midgut junction | 6.25e-18 | 22 |
anatomical boundary | 6.25e-18 | 22 |
hepatobiliary system | 6.25e-18 | 22 |
foregut-midgut junction | 6.25e-18 | 22 |
hepatic diverticulum | 6.25e-18 | 22 |
liver primordium | 6.25e-18 | 22 |
septum transversum | 6.25e-18 | 22 |
liver bud | 6.25e-18 | 22 |
digestive tract diverticulum | 3.69e-17 | 23 |
sac | 3.69e-17 | 23 |
exocrine gland | 8.45e-16 | 25 |
exocrine system | 8.45e-16 | 25 |
trunk mesenchyme | 8.21e-09 | 45 |
epithelial tube | 1.95e-08 | 47 |
abdomen element | 4.30e-08 | 49 |
abdominal segment element | 4.30e-08 | 49 |
abdominal segment of trunk | 4.30e-08 | 49 |
abdomen | 4.30e-08 | 49 |
gut epithelium | 3.31e-07 | 55 |