FFCP PHASE1:Mm9::chr1:172128898..172128922,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=354 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:172128898..172128922,- | |||
|description=CAGE_peak_at_chr1:172128898..172128922,- | |description=CAGE_peak_at_chr1:172128898..172128922,- | ||
|id=chr1:172128898..172128922,- | |id=chr1:172128898..172128922,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!2.70e-08!308;UBERON:0000467!2.70e-08!308;UBERON:0002050!5.12e-08!317;UBERON:0005423!5.12e-08!317;UBERON:0000923!1.31e-07!314;UBERON:0005291!1.31e-07!314;UBERON:0006598!1.31e-07!314;UBERON:0002532!1.31e-07!314;UBERON:0005172!4.75e-07!49;UBERON:0005173!4.75e-07!49;UBERON:0002417!4.75e-07!49;UBERON:0000916!4.75e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.79e-10,118;UBERON:0000925,6.79e-10,118;UBERON:0006595,6.79e-10,118;UBERON:0004921,2.44e-09,114;UBERON:0001007,6.11e-09,116;UBERON:0001555,6.11e-09,116;UBERON:0007026,6.11e-09,116;UBERON:0001041,9.63e-08,80;UBERON:0009569,7.63e-07,66;UBERON:0002100,8.72e-07,90;UBERON:0005177,9.21e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,1.33243904726265,0.404950534779652,0.699561878128147,0.630924330716475,0.411343300817216,0.42438965179803,1.53077922271926,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,0.550640256485045,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0.274462930807229,0,0,1.12552522006336,0.916789486660861,0.294628585473668,0,0,0.151452386666368,0.151143120213571,0,0,2.719885334831,0,0,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0.253359865475099,0,2.39786147410026,2.07150306917737,1.03909497345377,0.173485326766136,0.608930956624282,1.61430848079241,0.60289056221049,1.64624189989987,0.125666591329675,1.23597483867187,3.03658649531814,1.76922110389975,0.323533699894818,1.32504911076236,0.484875253135222,0,0.878342391034642,11.51956887474,3.57639877292028,0,0,0,0.449371918214468,0,0.753926112677186,1.04294592115366,0.767146371990992,0.62336413367868,0.648965052271031,0.81471491080253,2.36373244159177,0.758168275301024,1.05220927943237,1.56144531555244,0.229902104433473,0,0.150704817835715,0.680364991513279,0.896796041993948,0.468508622798644,1.03481348295606,0,0.378212160335639,0,0.219195732427575,0.834141747676794,0,0.411564272815887,1.19420560091096,0,0,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0,1.13496333364198,0.877199924551994,0.219550115291051,0.134206418760372,0.630869845692382,0.411618449517138,1.32167513193519,0.528901133327089,0.213288250535234,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,0.190225626112559,5.21981967698963,1.31759163779209,1.25667604400135,1.98956472041151,1.9496408711912,14.3811105384675,4.97117514711797,2.98711909881551,2.27601481143698,0.228497025219458,1.1270773567308,0,0,0.98190147846446,0.442655759869801,0.295220295959204,0.627994911365499,2.22114895059241,0.296452627087149,0.500535317148282,0.589676985339609,2.9232074610031,1.01430060694251,1.92941727801933,1.01850340712568,1.43848068725405,13.1329533687779,2.19649130550465,2.87536413054709,5.20997326735905,0.624075346229121,0.505157755894224,1.07638448113147,3.37710464954357,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,1.75620283072019,1.57635144106191,1.10732344824387,1.11618338060241,1.14704320301017,1.38147985492716,1.3018415272336,0,0,1.47529281905711,1.93155722413313,0.963303539926752,1.40654023910644,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,1.43381278771531,0.668396022247182,0.283076530788832,0,0.584511715822624,0.790575555893047,1.28528526568723,0.99358059645788,0.712262414669021,0.651547837414304,0.824850614862677,6.63725691699814,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0,1.81766864738753,2.13898427030833,0.948110273807448,0,1.03135543248187,0,0.18006109403131,0.776152102696527,0.857348140126369,0.177340233642274,0.178368817602071,0,0,2.3467170806371,1.27099242518292,0.441056796109924,0.16488625294148,4.68246837418126,0.784068024066026,0.477489376012546,0.328281799490123,8.74442509889552,0.741701208042039,3.58828849675491,1.65109494370578,0.925972636848558,1.50694765603753,4.37421528707281,1.60144721244566,0,0.139951452323658,0.138199973804424,0,1.10717597753397,0,0.216010681643603,0,0,1.07891477107857,1.40510874733071,1.57053565190418,2.46268449254406,0,0.56369293868419,0.747582730219894,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.58678619322877,0.13020438484395,0.943734099831398,0.483168241652012,0,3.16011120628178,1.01362607645082,1.54066435747241,1.16928740680016,0,0.79472541912506,0.961563596159751,2.06765338044408,0.908698049533329,1.06689529317,1.00826185136841,0.877120926657772,1.34696578296461,1.16876902181569,0.906921534460845,0.221985953374065,0.986852422704233,0.335769232728157,0.579568782096571,1.12609485270709,1.46521299413812,1.50057865355346,0.501572104035363,1.12950368523413,0,0.572895513439397,0.343706364687375,0,0,0,0,0.906284817968409,1.03552062350364,0.31136204275253,0.399024873401031,0.512200817262403,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0,0,0.188218760830661,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,1.07435527024149,1.72159498861959,1.32354851471709,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,1.33243904726265,0.404950534779652,0.699561878128147,0.630924330716475,0.411343300817216,0.42438965179803,1.53077922271926,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,0.550640256485045,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0.274462930807229,0,0,1.12552522006336,0.916789486660861,0.294628585473668,0,0,0.151452386666368,0.151143120213571,0,0,2.719885334831,0,0,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0.253359865475099,0,2.39786147410026,2.07150306917737,1.03909497345377,0.173485326766136,0.608930956624282,1.61430848079241,0.60289056221049,1.64624189989987,0.125666591329675,1.23597483867187,3.03658649531814,1.76922110389975,0.323533699894818,1.32504911076236,0.484875253135222,0,0.878342391034642,11.51956887474,3.57639877292028,0,0,0,0.449371918214468,0,0.753926112677186,1.04294592115366,0.767146371990992,0.62336413367868,0.648965052271031,0.81471491080253,2.36373244159177,0.758168275301024,1.05220927943237,1.56144531555244,0.229902104433473,0,0.150704817835715,0.680364991513279,0.896796041993948,0.468508622798644,1.03481348295606,0,0.378212160335639,0,0.219195732427575,0.834141747676794,0,0.411564272815887,1.19420560091096,0,0,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.16455984991348,0,1.13496333364198,0.877199924551994,0.219550115291051,0.134206418760372,0.630869845692382,0.411618449517138,1.32167513193519,0.528901133327089,0.213288250535234,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,0.190225626112559,5.21981967698963,1.31759163779209,1.25667604400135,1.98956472041151,1.9496408711912,14.3811105384675,4.97117514711797,2.98711909881551,2.27601481143698,0.228497025219458,1.1270773567308,0,0,0.98190147846446,0.442655759869801,0.295220295959204,0.627994911365499,2.22114895059241,0.296452627087149,0.500535317148282,0.589676985339609,2.9232074610031,1.01430060694251,1.92941727801933,1.01850340712568,1.43848068725405,13.1329533687779,2.19649130550465,2.87536413054709,5.20997326735905,0.624075346229121,0.505157755894224,1.07638448113147,3.37710464954357,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,1.75620283072019,1.57635144106191,1.10732344824387,1.11618338060241,1.14704320301017,1.38147985492716,1.3018415272336,0,0,1.47529281905711,1.93155722413313,0.963303539926752,1.40654023910644,0.491804836130026,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,1.43381278771531,0.668396022247182,0.283076530788832,0,0.584511715822624,0.790575555893047,1.28528526568723,0.99358059645788,0.712262414669021,0.651547837414304,0.824850614862677,6.63725691699814,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0,1.81766864738753,2.13898427030833,0.948110273807448,0,1.03135543248187,0,0.18006109403131,0.776152102696527,0.857348140126369,0.177340233642274,0.178368817602071,0,0,2.3467170806371,1.27099242518292,0.441056796109924,0.16488625294148,4.68246837418126,0.784068024066026,0.477489376012546,0.328281799490123,8.74442509889552,0.741701208042039,3.58828849675491,1.65109494370578,0.925972636848558,1.50694765603753,4.37421528707281,1.60144721244566,0,0.139951452323658,0.138199973804424,0,1.10717597753397,0,0.216010681643603,0,0,1.07891477107857,1.40510874733071,1.57053565190418,2.46268449254406,0,0.56369293868419,0.747582730219894,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.58678619322877,0.13020438484395,0.943734099831398,0.483168241652012,0,3.16011120628178,1.01362607645082,1.54066435747241,1.16928740680016,0,0.79472541912506,0.961563596159751,2.06765338044408,0.908698049533329,1.06689529317,1.00826185136841,0.877120926657772,1.34696578296461,1.16876902181569,0.906921534460845,0.221985953374065,0.986852422704233,0.335769232728157,0.579568782096571,1.12609485270709,1.46521299413812,1.50057865355346,0.501572104035363,1.12950368523413,0,0.572895513439397,0.343706364687375,0,0,0,0,0.906284817968409,1.03552062350364,0.31136204275253,0.399024873401031,0.512200817262403,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0,0,0.188218760830661,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,1.07435527024149,1.72159498861959,1.32354851471709,0.927471342481686 | ||
|short_description=p@chr1:172128898..172128922,- | |short_description=p@chr1:172128898..172128922,- | ||
}} | }} |
Latest revision as of 05:16, 5 August 2015
Short description: | p@chr1:172128898..172128922, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:172128898..172128922, - |
Coexpression cluster: | MCL_coexpression_mm9:354 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.79e-10 | 118 |
endoderm | 6.79e-10 | 118 |
presumptive endoderm | 6.79e-10 | 118 |
subdivision of digestive tract | 2.44e-09 | 114 |
digestive system | 6.11e-09 | 116 |
digestive tract | 6.11e-09 | 116 |
primitive gut | 6.11e-09 | 116 |
foregut | 9.63e-08 | 80 |
subdivision of trunk | 7.63e-07 | 66 |
trunk | 8.72e-07 | 90 |
trunk region element | 9.21e-07 | 79 |