FFCP PHASE1:Mm9::chr1:174365430..174365443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=656 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174365430..174365443,+ | |||
|description=CAGE_peak_at_chr1:174365430..174365443,+ | |description=CAGE_peak_at_chr1:174365430..174365443,+ | ||
|id=chr1:174365430..174365443,+ | |id=chr1:174365430..174365443,+ | ||
|ontology_enrichment_celltype=CL:0000473!1.42e-09!3;CL:0000627!1.42e-09!3;CL:0000682!1.42e-09!3;CL:0000239!5.12e-08!6;CL:0000677!5.12e-08!6;CL:0000212!5.12e-08!6;CL:0000584!5.12e-08!6;CL:0002563!7.58e-08!9;CL:0002251!7.58e-08!9;CL:0000075!7.32e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.31e-22,3;CL:0000239,1.44e-19,6;CL:0000677,1.44e-19,6;CL:0000584,1.44e-19,6;CL:0000075,7.91e-17,7;CL:0000066,7.44e-14,25;CL:0002563,3.62e-13,9;CL:0002251,3.62e-13,9;CL:0000473,4.65e-10,7;CL:0002076,5.17e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.75e-11!15;UBERON:0004923!3.51e-10!24;UBERON:0002465!1.73e-09!3;UBERON:0000014!5.55e-08!5;UBERON:0001003!5.55e-08!5;UBERON:0002097!5.55e-08!5;UBERON:0002199!5.55e-08!5;UBERON:0007029!5.55e-08!5;UBERON:0007376!5.55e-08!5;UBERON:0002416!5.55e-08!5;UBERON:0007383!5.55e-08!5;UBERON:0003350!7.58e-08!9;UBERON:0004808!7.58e-08!9;UBERON:0001277!7.58e-08!9;UBERON:0001242!2.12e-07!13;UBERON:0000060!2.12e-07!13;UBERON:0001262!2.12e-07!13;UBERON:0004786!2.12e-07!13;UBERON:0001962!3.99e-07!2;UBERON:0001961!3.99e-07!2;UBERON:0001744!3.99e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.93e-17,15;UBERON:0001962,3.44e-16,2;UBERON:0001961,3.44e-16,2;UBERON:0001744,3.44e-16,2;UBERON:0004923,1.72e-14,24;UBERON:0003350,3.62e-13,9;UBERON:0004808,3.62e-13,9;UBERON:0001277,3.62e-13,9;UBERON:0002465,4.11e-11,3;UBERON:0000485,7.86e-11,11;UBERON:0001242,3.31e-09,13;UBERON:0001262,3.31e-09,13;UBERON:0004786,3.31e-09,13;UBERON:0003199,7.41e-09,1 | |||
|phase1_expression=0,2.79180326111489,7.27998783023258,0,0,1.51091344720701,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,8.31960598525715,6.42345986988076,3.44539178469012,4.73838195774982,4.95583835177545,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2929457926309,0,0,0,0,0,0,0,0,0,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,2.79180326111489,7.27998783023258,0,0,1.51091344720701,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,8.31960598525715,6.42345986988076,3.44539178469012,4.73838195774982,4.95583835177545,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2929457926309,0,0,0,0,0,0,0,0,0,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr1:174365430..174365443,+ | |short_description=p@chr1:174365430..174365443,+ | ||
}} | }} |
Latest revision as of 07:39, 5 August 2015
Short description: | p@chr1:174365430..174365443, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174365430..174365443, + |
Coexpression cluster: | MCL_coexpression_mm9:656 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.31e-22 | 3 |
brush border epithelial cell | 1.44e-19 | 6 |
gut absorptive cell | 1.44e-19 | 6 |
enterocyte | 1.44e-19 | 6 |
columnar/cuboidal epithelial cell | 7.91e-17 | 7 |
epithelial cell | 7.44e-14 | 25 |
intestinal epithelial cell | 3.62e-13 | 9 |
epithelial cell of alimentary canal | 3.62e-13 | 9 |
defensive cell | 4.65e-10 | 7 |
endo-epithelial cell | 5.17e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.93e-17 | 15 |
gut-associated lymphoid tissue | 3.44e-16 | 2 |
mucosa-associated lymphoid tissue | 3.44e-16 | 2 |
lymphoid tissue | 3.44e-16 | 2 |
organ component layer | 1.72e-14 | 24 |
epithelium of mucosa | 3.62e-13 | 9 |
gastrointestinal system epithelium | 3.62e-13 | 9 |
intestinal epithelium | 3.62e-13 | 9 |
lymphoid system | 4.11e-11 | 3 |
simple columnar epithelium | 7.86e-11 | 11 |
intestinal mucosa | 3.31e-09 | 13 |
wall of intestine | 3.31e-09 | 13 |
gastrointestinal system mucosa | 3.31e-09 | 13 |
egg chamber | 7.41e-09 | 1 |