FFCP PHASE1:Mm9::chr12:86479702..86479714,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:86479702..86479714,-|id=chr12:86479702..86479714,-|ontology_enrichment_celltype=CL:0000473!1.91e-20!3;CL:0000627!1.91e-20!3;CL:0000682!1.91e-20!3;CL:0000239!2.08e-17!6;CL:0000677!2.08e-17!6;CL:0000212!2.08e-17!6;CL:0000584!2.08e-17!6;CL:0000075!5.77e-15!7;CL:0000066!3.22e-12!25;CL:0002563!1.06e-11!9;CL:0002251!1.06e-11!9;CL:0002076!4.23e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,1.25e-23,6;CL:0000677,1.25e-23,6;CL:0000584,1.25e-23,6;CL:0000075,2.53e-20,7;CL:0000066,4.14e-17,25;CL:0002563,6.61e-16,9;CL:0002251,6.61e-16,9;CL:0000473,3.13e-12,7;CL:0002076,1.09e-09,15;CL:0000223,2.44e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.53e-20!15;UBERON:0001962!8.16e-14!2;UBERON:0001961!8.16e-14!2;UBERON:0001744!8.16e-14!2;UBERON:0004923!1.62e-12!24;UBERON:0001242!3.06e-12!13;UBERON:0000060!3.06e-12!13;UBERON:0001262!3.06e-12!13;UBERON:0004786!3.06e-12!13;UBERON:0003350!1.06e-11!9;UBERON:0004808!1.06e-11!9;UBERON:0001277!1.06e-11!9;UBERON:0000485!1.29e-09!11;UBERON:0002465!1.63e-09!3;UBERON:0003199!1.14e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.53e-28,15;UBERON:0001962,1.94e-18,2;UBERON:0001961,1.94e-18,2;UBERON:0001744,1.94e-18,2;UBERON:0004923,1.69e-17,24;UBERON:0001242,8.52e-17,13;UBERON:0001262,8.52e-17,13;UBERON:0004786,8.52e-17,13;UBERON:0003350,6.61e-16,9;UBERON:0004808,6.61e-16,9;UBERON:0001277,6.61e-16,9;UBERON:0000485,4.36e-13,11;UBERON:0002465,1.24e-12,3;UBERON:0003199,5.62e-10,1;UBERON:0000160,4.27e-07,31|phase1_expression=0,11.5161884520989,13.1949779422965,0,0,3.02182689441402,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31960598525715,7.34109699414944,13.7815671387605,13.3536218809313,7.97243560937789,0,0,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr12:86479702..86479714,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:86479702..86479714,- | |||
|description=CAGE_peak_at_chr12:86479702..86479714,- | |||
|id=chr12:86479702..86479714,- | |||
|ontology_enrichment_celltype=CL:0000473!1.91e-20!3;CL:0000627!1.91e-20!3;CL:0000682!1.91e-20!3;CL:0000239!2.08e-17!6;CL:0000677!2.08e-17!6;CL:0000212!2.08e-17!6;CL:0000584!2.08e-17!6;CL:0000075!5.77e-15!7;CL:0000066!3.22e-12!25;CL:0002563!1.06e-11!9;CL:0002251!1.06e-11!9;CL:0002076!4.23e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-27,3;CL:0000239,1.25e-23,6;CL:0000677,1.25e-23,6;CL:0000584,1.25e-23,6;CL:0000075,2.53e-20,7;CL:0000066,4.14e-17,25;CL:0002563,6.61e-16,9;CL:0002251,6.61e-16,9;CL:0000473,3.13e-12,7;CL:0002076,1.09e-09,15;CL:0000223,2.44e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.53e-20!15;UBERON:0001962!8.16e-14!2;UBERON:0001961!8.16e-14!2;UBERON:0001744!8.16e-14!2;UBERON:0004923!1.62e-12!24;UBERON:0001242!3.06e-12!13;UBERON:0000060!3.06e-12!13;UBERON:0001262!3.06e-12!13;UBERON:0004786!3.06e-12!13;UBERON:0003350!1.06e-11!9;UBERON:0004808!1.06e-11!9;UBERON:0001277!1.06e-11!9;UBERON:0000485!1.29e-09!11;UBERON:0002465!1.63e-09!3;UBERON:0003199!1.14e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.53e-28,15;UBERON:0001962,1.94e-18,2;UBERON:0001961,1.94e-18,2;UBERON:0001744,1.94e-18,2;UBERON:0004923,1.69e-17,24;UBERON:0001242,8.52e-17,13;UBERON:0001262,8.52e-17,13;UBERON:0004786,8.52e-17,13;UBERON:0003350,6.61e-16,9;UBERON:0004808,6.61e-16,9;UBERON:0001277,6.61e-16,9;UBERON:0000485,4.36e-13,11;UBERON:0002465,1.24e-12,3;UBERON:0003199,5.62e-10,1;UBERON:0000160,4.27e-07,31 | |||
|phase1_expression=0,11.5161884520989,13.1949779422965,0,0,3.02182689441402,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31960598525715,7.34109699414944,13.7815671387605,13.3536218809313,7.97243560937789,0,0,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:86479702..86479714,- | |||
}} |
Latest revision as of 09:52, 5 August 2015
Short description: | p@chr12:86479702..86479714, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:86479702..86479714, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.37e-27 | 3 |
brush border epithelial cell | 1.25e-23 | 6 |
gut absorptive cell | 1.25e-23 | 6 |
enterocyte | 1.25e-23 | 6 |
columnar/cuboidal epithelial cell | 2.53e-20 | 7 |
epithelial cell | 4.14e-17 | 25 |
intestinal epithelial cell | 6.61e-16 | 9 |
epithelial cell of alimentary canal | 6.61e-16 | 9 |
defensive cell | 3.13e-12 | 7 |
endo-epithelial cell | 1.09e-09 | 15 |
endodermal cell | 2.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.53e-28 | 15 |
gut-associated lymphoid tissue | 1.94e-18 | 2 |
mucosa-associated lymphoid tissue | 1.94e-18 | 2 |
lymphoid tissue | 1.94e-18 | 2 |
organ component layer | 1.69e-17 | 24 |
intestinal mucosa | 8.52e-17 | 13 |
wall of intestine | 8.52e-17 | 13 |
gastrointestinal system mucosa | 8.52e-17 | 13 |
epithelium of mucosa | 6.61e-16 | 9 |
gastrointestinal system epithelium | 6.61e-16 | 9 |
intestinal epithelium | 6.61e-16 | 9 |
simple columnar epithelium | 4.36e-13 | 11 |
lymphoid system | 1.24e-12 | 3 |
egg chamber | 5.62e-10 | 1 |
intestine | 4.27e-07 | 31 |