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FFCP PHASE1:Mm9::chr11:115685343..115685411,+: Difference between revisions

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{{FFCP|EntrezGene=217325|HGNC=|MCL_coexpression_id=24|UniProt=Q3TJ91,B1ATA8,Q8BVC8|association_with_transcript=0bp_to_ENSMUST00000103032,ENSMUST00000133250,NM_001252532,NM_145438,uc007mit.1,uc011yhq.1_5end|description=CAGE_peak_1_at_Llgl2_5end|id=chr11:115685343..115685411,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.32e-26!130;UBERON:0000925!4.32e-26!130;UBERON:0006595!4.32e-26!130;UBERON:0001007!4.79e-25!128;UBERON:0001555!4.79e-25!128;UBERON:0007026!4.79e-25!128;UBERON:0004921!7.12e-24!126;UBERON:0004185!7.12e-24!126;UBERON:0000160!8.29e-21!43;UBERON:0005409!1.43e-19!59;UBERON:0000077!4.81e-10!97;UBERON:0000344!1.34e-09!15;UBERON:0001242!1.21e-08!13;UBERON:0000060!1.21e-08!13;UBERON:0001262!1.21e-08!13;UBERON:0004786!1.21e-08!13;UBERON:0000481!1.45e-08!230;UBERON:0001041!1.57e-08!92;UBERON:0002108!4.38e-08!16;UBERON:0003104!5.22e-08!131;UBERON:0009142!5.22e-08!131|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-20,118;UBERON:0000925,1.96e-20,118;UBERON:0006595,1.96e-20,118;UBERON:0001007,1.67e-19,116;UBERON:0001555,1.67e-19,116;UBERON:0007026,1.67e-19,116;UBERON:0004921,1.85e-18,114;UBERON:0000160,6.38e-16,31;UBERON:0005409,1.57e-14,47;UBERON:0000344,1.30e-09,15;UBERON:0001242,1.18e-08,13;UBERON:0001262,1.18e-08,13;UBERON:0004786,1.18e-08,13;UBERON:0005177,1.31e-08,79;UBERON:0002100,1.51e-07,90|phase1_expression=15.3742893220602,182.165162787746,171.079714010466,206.280592111258,220.895016906339,87.8008592099184,87.3711275827266,11.879345756625,14.0788722151667,11.0010327371337,5.30775701499065,6.62108919661292,15.2368649638773,13.7250031797826,4.66353666541928,2.22722794128809,3.49780939064073,10.0947892914636,9.87223921961319,8.06340338416257,16.5834415794586,7.34753038886551,6.79119451761232,61.5970827754616,57.1229109857253,136.667207459375,103.382879078178,92.4371588222464,99.7622952145963,85.4382139886165,73.1710685162506,29.211410979143,32.5984337419822,31.6963362030877,37.839562187417,33.9118676531324,41.6505486775233,2.92972141515835,2.3440060335714,3.66466620781659,2.94115744015507,2.73218193983378,3.39857247121808,5.03587271902309,4.05507724878058,4.22157529971868,30.5132624295735,4.57852828398938,19.3323840806335,21.7761486963197,8.67915814077248,7.18762821824858,11.5769998179838,21.035502118329,19.4934403502629,9.77585856936598,18.6246735960192,24.7522604293172,0.202316460859598,0.528990979272033,0.633831403506179,10.5041804941431,6.22506357277798,4.04954872776629,4.94433181283487,6.3943210345149,4.19440154725767,2.68952813725088,0.518448061542388,0.270011876663381,0.210324961351382,0,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.307213066512487,0,0.365950574409639,0.52091337055676,2.23346399201105,0.56276261003168,0.15279824777681,0.883885756421003,0.284743361598206,0.372798891650601,1.4387976733305,1.28471652181535,36.8127900651131,18.9293252935905,12.9194553404473,30.7630819233556,28.5901623676974,26.4335863387428,21.7688851204215,1.53387290320252,1.03914401841148,1.06001872353102,24.7884418806958,5.13305909657271,0,0,26.4119070033681,31.6699831843873,27.8038444758131,34.1409800359989,6.73238497482646,5.93768556259299,3.99016251562112,5.78484408793068,4.61230994512117,4.22023393547343,4.58595957829249,5.6549966098354,135.462842318437,3.7595832799177,4.42305275974937,4.85300549842228,3.5334642953663,3.87900202508178,63.3731988141615,0.292780797011547,1.8850203613211,87.3663128813382,0.239630249011841,1.79970819298022,1.39777249780371,0.449371918214468,0,0.125654352112864,0.521472960576829,0.511430914660661,0.62336413367868,0.811206315338788,11.3041693873851,11.3210343255185,38.4138592819186,64.816091613034,2.86264974517948,2.06911893990126,2.52086981727489,3.46621081022145,6.5995404176788,7.17436833595159,12.1812241927647,43.2034629134156,3.88022387279116,2.83659120251729,5.45448484908241,5.91828477554452,8.06337022754234,10.447564995665,13.7874031393322,6.36909653819178,0,1.54408744268829,1.70498099637356,15.1201813950916,8.91199027928165,10.6236616261999,12.3107262504309,11.4123254413494,9.10175966035532,9.99895962426754,13.413670069981,12.6106569756543,10.2027106946358,5.58169377868924,9.80932595504854,9.9415991449226,10.3188554186794,13.1522290385164,2.52347938276953,0.92614151141356,130.185000495616,57.9146740993162,8.31824177087412,13.237490296045,29.8972510267257,53.2444505005624,58.263047487356,73.2368660533353,71.1793592316767,59.1269247459199,53.7857346832577,66.6504181337855,58.6841902228552,65.6138168317582,68.9480379100275,88.0204427784303,7.58671603812327,13.3670759753383,13.5249282807697,20.1614814566861,25.407775818959,33.9457368269142,34.90656849259,45.7591458736767,39.7206781438678,53.3075748142178,21.0481365231876,8.3422552858047,8.25547779475453,11.0182435068578,13.9973483758067,14.9529839046498,13.4951701444152,26.7557407829254,37.2911021582581,16.1991233780968,14.3768206527355,27.166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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:217325
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=uniprot:Q3TJ91,uniprot:B1ATA8,uniprot:Q8BVC8
|association_with_transcript=0bp_to_ENSMUST00000103032,ENSMUST00000133250,NM_001252532,NM_145438,uc007mit.1,uc011yhq.1_5end
|cluster_id=chr11:115685343..115685411,+
|description=CAGE_peak_1_at_Llgl2_5end
|id=chr11:115685343..115685411,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-20,118;UBERON:0000925,1.96e-20,118;UBERON:0006595,1.96e-20,118;UBERON:0001007,1.67e-19,116;UBERON:0001555,1.67e-19,116;UBERON:0007026,1.67e-19,116;UBERON:0004921,1.85e-18,114;UBERON:0000160,6.38e-16,31;UBERON:0005409,1.57e-14,47;UBERON:0000344,1.30e-09,15;UBERON:0001242,1.18e-08,13;UBERON:0001262,1.18e-08,13;UBERON:0004786,1.18e-08,13;UBERON:0005177,1.31e-08,79;UBERON:0002100,1.51e-07,90
|phase1_expression=15.3742893220602,182.165162787746,171.079714010466,206.280592111258,220.895016906339,87.8008592099184,87.3711275827266,11.879345756625,14.0788722151667,11.0010327371337,5.30775701499065,6.62108919661292,15.2368649638773,13.7250031797826,4.66353666541928,2.22722794128809,3.49780939064073,10.0947892914636,9.87223921961319,8.06340338416257,16.5834415794586,7.34753038886551,6.79119451761232,61.5970827754616,57.1229109857253,136.667207459375,103.382879078178,92.4371588222464,99.7622952145963,85.4382139886165,73.1710685162506,29.211410979143,32.5984337419822,31.6963362030877,37.839562187417,33.9118676531324,41.6505486775233,2.92972141515835,2.3440060335714,3.66466620781659,2.94115744015507,2.73218193983378,3.39857247121808,5.03587271902309,4.05507724878058,4.22157529971868,30.5132624295735,4.57852828398938,19.3323840806335,21.7761486963197,8.67915814077248,7.18762821824858,11.5769998179838,21.035502118329,19.4934403502629,9.77585856936598,18.6246735960192,24.7522604293172,0.202316460859598,0.528990979272033,0.633831403506179,10.5041804941431,6.22506357277798,4.04954872776629,4.94433181283487,6.3943210345149,4.19440154725767,2.68952813725088,0.518448061542388,0.270011876663381,0.210324961351382,0,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.307213066512487,0,0.365950574409639,0.52091337055676,2.23346399201105,0.56276261003168,0.15279824777681,0.883885756421003,0.284743361598206,0.372798891650601,1.4387976733305,1.28471652181535,36.8127900651131,18.9293252935905,12.9194553404473,30.7630819233556,28.5901623676974,26.4335863387428,21.7688851204215,1.53387290320252,1.03914401841148,1.06001872353102,24.7884418806958,5.13305909657271,0,0,26.4119070033681,31.6699831843873,27.8038444758131,34.1409800359989,6.73238497482646,5.93768556259299,3.99016251562112,5.78484408793068,4.61230994512117,4.22023393547343,4.58595957829249,5.6549966098354,135.462842318437,3.7595832799177,4.42305275974937,4.85300549842228,3.5334642953663,3.87900202508178,63.3731988141615,0.292780797011547,1.8850203613211,87.3663128813382,0.239630249011841,1.79970819298022,1.39777249780371,0.449371918214468,0,0.125654352112864,0.521472960576829,0.511430914660661,0.62336413367868,0.811206315338788,11.3041693873851,11.3210343255185,38.4138592819186,64.816091613034,2.86264974517948,2.06911893990126,2.52086981727489,3.46621081022145,6.5995404176788,7.17436833595159,12.1812241927647,43.2034629134156,3.88022387279116,2.83659120251729,5.45448484908241,5.91828477554452,8.06337022754234,10.447564995665,13.7874031393322,6.36909653819178,0,1.54408744268829,1.70498099637356,15.1201813950916,8.91199027928165,10.6236616261999,12.3107262504309,11.4123254413494,9.10175966035532,9.99895962426754,13.413670069981,12.6106569756543,10.2027106946358,5.58169377868924,9.80932595504854,9.9415991449226,10.3188554186794,13.1522290385164,2.52347938276953,0.92614151141356,130.185000495616,57.9146740993162,8.31824177087412,13.237490296045,29.8972510267257,53.2444505005624,58.263047487356,73.2368660533353,71.1793592316767,59.1269247459199,53.7857346832577,66.6504181337855,58.6841902228552,65.6138168317582,68.9480379100275,88.0204427784303,7.58671603812327,13.3670759753383,13.5249282807697,20.1614814566861,25.407775818959,33.9457368269142,34.90656849259,45.7591458736767,39.7206781438678,53.3075748142178,21.0481365231876,8.3422552858047,8.25547779475453,11.0182435068578,13.9973483758067,14.9529839046498,13.4951701444152,26.7557407829254,37.2911021582581,16.1991233780968,14.3768206527355,27.1662891798007,20.594486425561,33.3404118890188,21.8864844496733,56.9283355208773,25.1264338626582,7.76914788258988,13.0371981153621,11.3729207469376,19.4792906079457,54.7745461834738,54.5119937628971,76.6875236081149,23.4876364718225,27.0186921371505,34.4422300300172,23.2685906896348,27.2842271348115,29.9423551263729,7.53956419696361,2.71952841909355,25.0799779239708,20.1433824802455,1.12385412991454,1.87538698547525,1.47541450839008,9.84636616097055,2.2085575359138,1.56175497718655,1.29254038639679,0.955875191810208,1.33679204449436,0.566153061577665,1.61924280669958,0.876767573733936,0,1.92792789853084,13.3423680095772,9.97167380536629,8.95878276444668,22.1059964783198,57.080409486184,33.7465084255424,32.9532677091579,41.8703277058094,52.2684350398968,43.0409207121498,45.4833795976069,37.4439741361831,34.580245703318,43.9291093530784,52.7093042874994,71.1635248412489,15.6602218646742,7.20244376125241,12.0303575917962,14.5749183821483,17.3793428969428,14.2695054081656,15.1385098953951,20.0946866415636,29.5686352160275,80.072522786524,35.2845436887939,20.1161228588606,11.948367575497,12.3038366853438,24.9488198966555,25.1135576609944,71.9957666475731,0.556275906031529,5.12612642393558,5.77883230297023,2.03713980106683,2.82552685507037,1.91371918809435,4.57556346413045,3.0596117398894,4.89830083132803,4.14599921413271,71.6002963511335,11.3880957689209,20.9419051140654,29.4854580443517,40.9813060188359,45.8561383866973,43.6960482286819,41.078767495492,66.2242533219595,101.22929414089,45.3577698553456,1.12738587736838,4.63501292736334,3.97100377097034,5.05573089694524,4.00395452780966,4.05494701177868,3.99014611395563,8.98410255423256,6.60613869881978,3.8653459332161,5.76060012515731,12.324433704499,14.798940716182,11.6063381596255,5.1968329191118,10.025494957379,8.74197961037565,9.97622231015741,8.12292399460175,7.16861794631848,7.62068066549998,9.37683521772617,10.0381617161945,11.7378446801202,12.2720747290647,44.2124248049662,197.345512549544,107.83605564459,111.643269882112,28.9784391048286,21.7711671523371,37.5460829747893,45.446096364762,38.1194799066876,0,0,0,0.343706364687375,0,2.2661816921691,0,0.900642406448441,0,1.03552062350364,3.1136204275253,6.3843979744165,3.75613932659095,8.265628380322,4.19226325255965,8.45680138870065,9.77885602327107,14.0103838922448,12.8367683836726,9.8551912587881,11.1530891951705,11.6948331659367,13.8589431055426,11.7166028900911,12.3486258254569,11.9073422820768,13.4425818096032,13.5036454324594,12.3625770240992,11.0399190100798,10.9718160763333,10.6485483695602,11.921809497366,10.0289027476307,9.97559432402504,12.3537327521848,12.6220301282213,10.2597187460759,13.9878237261238,11.7839877048125,13.1684870117833,13.1010961559499,8.59385190656348,11.0005157242036,10.6098636039628,10.9916654292696,16.3752125911786,19.3383948643468,6.50380329034067,9.70602244125868,3.01428186306548
|short_description=p1@Llgl2
}}

Revision as of 11:12, 5 August 2015

Short description:p1@Llgl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Llgl2_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000103032, ENSMUST00000133250, NM_001252532, NM_145438, uc007mit.1, uc011yhq.1_5end
EntrezGene:217325
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Llgl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5182.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6171.08
CD326+ enterocyte, pool1.CNhs13542.11848-124I3206.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I4220.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I787.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I887.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D161.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.12
GP2+ M cell, pool1.CNhs13228.11845-124H9136.67
GP2+ M cell, pool2.CNhs13231.11846-124I1103.38
GP2+ M cell, pool3.CNhs13240.11847-124I292.44
Ileum epithelium, pool1.CNhs13199.10252-104B999.76
Ileum epithelium, pool2.CNhs13232.10253-104C185.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C873.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I329.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G632.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.91
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F741.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B730.51
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.04
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.75
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G336.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F428.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.43
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G231.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G327.80
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.14
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A8135.46
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H463.37
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H787.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.32
epididymis, adult.CNhs10490.58-23B238.41
eyeball, adult.CNhs10484.31-12G464.82
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G812.18
eyeball, neonate N16.CNhs11188.777-19A243.20
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E25.45
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B513.79
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I910.62
heart, embryo E14.CNhs10597.403-26D412.31
heart, embryo E15.CNhs11017.431-16C811.41
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G313.41
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I210.20
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G19.81
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D213.15
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I3130.19
intestine, adult.CNhs10496.178-9A357.91
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D513.24
intestine, embryo E15.CNhs10602.976-16D829.90
intestine, embryo E16.CNhs10585.463-22H453.24
intestine, embryo E17.CNhs10582.482-18D358.26
intestine, embryo E18.CNhs10526.1289-20F773.24
intestine, neonate N00.CNhs11126.644-26D171.18
intestine, neonate N01.CNhs11192.1322-23E959.13
intestine, neonate N06.CNhs11102.688-20B853.79
intestine, neonate N07.CNhs11095.720-20F266.65
intestine, neonate N10.CNhs11098.755-23A558.68
intestine, neonate N20.CNhs11187.827-18D165.61
intestine, neonate N25.CNhs11121.1352-25E368.95
intestine, neonate N30.CNhs11131.1384-42G188.02
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F813.37
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I220.16
kidney, embryo E18.CNhs11001.1288-20C725.41
kidney, neonate N00.CNhs11214.646-21G733.95
kidney, neonate N10.CNhs11206.758-6D534.91
kidney, neonate N20.CNhs11113.832-19I145.76
kidney, neonate N25.CNhs11122.1353-25F339.72
kidney, neonate N30.CNhs11203.1385-42H153.31
liver, adult pregnant day01.CNhs10466.508-5B221.05
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E111.02
liver, embryo E15.CNhs10520.433-16D714.00
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G426.76
liver, neonate N00.CNhs11117.641-24F437.29
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H227.17
liver, neonate N10.CNhs11115.751-24B920.59
liver, neonate N20.CNhs11220.823-25A333.34
liver, neonate N25.CNhs11198.1368-26H121.89
liver, neonate N30.CNhs11106.1382-42D156.93
lung, adult.CNhs10474.28-22B125.13
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F813.04
lung, embryo E15.CNhs11020.432-17C511.37
lung, embryo E16.CNhs10998.458-17B619.48
lung, embryo E17.CNhs10605.480-44A654.77
lung, embryo E18.CNhs10583.1287-20I654.51
lung, neonate N00.CNhs11224.640-42C676.69
lung, neonate N06.CNhs11212.683-20E523.49
lung, neonate N07.CNhs11111.715-19A327.02
lung, neonate N10.CNhs11219.750-23E634.44
lung, neonate N20.CNhs11109.822-18A423.27
lung, neonate N25.CNhs11119.1359-25C727.28
lung, neonate N30.CNhs11133.1394-42H229.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I713.34
ovary, embryo E18.CNhs11040.505-44H79.97
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G622.11
pancreas, adult.CNhs10486.34-16E457.08
pancreas, embryo E14.CNhs11012.405-44F433.75
pancreas, embryo E15.CNhs11042.1556-45F232.95
pancreas, embryo E16.CNhs11003.460-26E541.87
pancreas, embryo E17.CNhs10599.1558-45G352.27
pancreas, embryo E18.CNhs10580.1535-43I743.04
pancreas, neonate N00.CNhs11105.645-26G945.48
pancreas, neonate N01.CNhs11138.1531-43D737.44
pancreas, neonate N02.CNhs11139.1539-43D834.58
pancreas, neonate N16.CNhs11136.787-43B643.93
pancreas, neonate N25.CNhs11094.1555-45E252.71
pancreas, neonate N30.CNhs11182.1548-44H571.16
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C712.03
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B917.38
pituitary gland, embryo E16.CNhs11036.449-43F614.27
pituitary gland, embryo E17.CNhs11039.1265-44F515.14
pituitary gland, neonate N00.CNhs11190.1308-22E920.09
placenta, adult pregnant day10.CNhs10472.539-13I729.57
placenta, adult pregnant day17.CNhs10464.577-18G380.07
prostate, adult.CNhs10470.859-1F835.28
skin, adult.CNhs10492.30-1C320.12
skin, neonate N00.CNhs11124.650-25G411.95
skin, neonate N03.CNhs11215.662-22H312.30
skin, neonate N06.CNhs11097.693-20I524.95
skin, neonate N10.CNhs11108.762-6C425.11
small intestine, neonate N16.CNhs11114.790-21I172.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H671.60
stomach, embryo E12.CNhs10588.356-43E311.39
stomach, embryo E15.CNhs10603.1252-16G820.94
stomach, embryo E16.CNhs11022.459-17D429.49
stomach, embryo E17.CNhs11006.1035-18D540.98
stomach, embryo E18.CNhs10999.1286-20C645.86
stomach, neonate N03.CNhs11193.1340-24B843.70
stomach, neonate N07.CNhs11210.718-18A941.08
stomach, neonate N25.CNhs11104.1355-25E466.22
stomach, neonate N30.CNhs11134.1386-42I1101.23
submandibular gland, adult.CNhs10469.59-29C145.36
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I48.98
testis, neonate N10.CNhs11204.763-44D96.61
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I211.61
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C110.03
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F89.98
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D37.62
thymus, neonate N10.CNhs11194.748-24E49.38
thymus, neonate N20.CNhs11186.820-7A210.04
thymus, neonate N25.CNhs11125.1362-25G711.74
thymus, neonate N30.CNhs11132.1393-42G212.27
tongue, adult.CNhs10499.32-1B444.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3197.35
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7107.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5111.64
urinary bladder, adult.CNhs10481.879-12E428.98
uterus, adult pregnant day19.CNhs10497.590-15F521.77
uterus, adult.CNhs10509.92-27E537.55
vagina, adult.CNhs10502.89-27D545.45
vesicular gland, adult.CNhs10491.51-27F838.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B316.38
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B43.01





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.96e-20118
endoderm1.96e-20118
presumptive endoderm1.96e-20118
digestive system1.67e-19116
digestive tract1.67e-19116
primitive gut1.67e-19116
subdivision of digestive tract1.85e-18114
intestine6.38e-1631
gastrointestinal system1.57e-1447
mucosa1.30e-0915
intestinal mucosa1.18e-0813
wall of intestine1.18e-0813
gastrointestinal system mucosa1.18e-0813
trunk region element1.31e-0879
trunk1.51e-0790
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