FFCP PHASE1:Mm9::chr4:57969494..57969498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2157 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:57969494..57969498,+ | |||
|description=CAGE_peak_at_chr4:57969494..57969498,+ | |description=CAGE_peak_at_chr4:57969494..57969498,+ | ||
|id=chr4:57969494..57969498,+ | |id=chr4:57969494..57969498,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.18e-08!66;CL:0000066!6.26e-08!25;CL:0000223!4.14e-07!20;CL:0002563!6.22e-07!9;CL:0002251!6.22e-07!9;CL:0000144!6.66e-07!121;CL:0000012!6.66e-07!121;CL:0002076!7.90e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.29e-17,25;CL:0002076,4.24e-17,15;CL:0000223,3.02e-16,20;CL:0002563,1.72e-14,9;CL:0002251,1.72e-14,9;CL:0000239,3.37e-10,6;CL:0000677,3.37e-10,6;CL:0000584,3.37e-10,6;CL:0000075,1.36e-08,7;CL:0000034,1.97e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.12e-09!15;UBERON:0001242!7.55e-09!13;UBERON:0000060!7.55e-09!13;UBERON:0001262!7.55e-09!13;UBERON:0004786!7.55e-09!13;UBERON:0003350!6.22e-07!9;UBERON:0004808!6.22e-07!9;UBERON:0001277!6.22e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.18e-16,13;UBERON:0001262,1.18e-16,13;UBERON:0004786,1.18e-16,13;UBERON:0000344,1.38e-16,15;UBERON:0003350,1.72e-14,9;UBERON:0004808,1.72e-14,9;UBERON:0001277,1.72e-14,9;UBERON:0000485,1.88e-11,11;UBERON:0004923,4.84e-09,24;UBERON:0000160,2.88e-07,31 | |||
|phase1_expression=0.480446541314382,1.74487703819681,3.63999391511629,3.32710632437513,7.01254021924886,1.6787927191189,2.10251376535973,1.16210991097419,0.985521055061667,1.17032263160997,1.02730780935303,0.8774937489487,0.171200729931206,0.34968160967599,0,0,0.699561878128147,0,0,0,0.255129870453209,0.397163804803541,0.261199789138935,0.799962113967033,2.06468352960453,1.14846392823004,1.7230479846363,1.50829862880122,1.52018735565099,1.51218077855958,2.66076612786366,8.89042942843484,5.53558308826113,0,5.48818077527422,1.32987716286794,6.53341940039581,1.67412652294763,0.7813353445238,2.09409497589519,3.52938892818609,2.73218193983378,1.45653105909346,1.88845226963366,1.62203089951223,1.10128051297009,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0.671130424230945,2.17608642603403,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,1.3498495759221,0,0.7104801149461,0.299600110518405,1.92109152660777,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0,0.530083353332288,0.529000920747499,8.98579914975201,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.421333260395256,1.02258193546835,1.55871602761721,1.06001872353102,0.14084341977668,1.28326477414318,0,0,3.68034769719064,2.78695852022608,6.0662933401774,0.22836775943812,0.258937883647172,0.742210695324124,0.520455980298408,0,0.461230994512117,0.60289056221049,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0,0.41889341362691,1.27728527604296,1.91704199209472,1.79970819298022,2.41433431438823,0.299581278809645,0.457500602818626,0,0,0.767146371990992,0.41557608911912,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0.772043721344145,2.55747149456033,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0,0.493679549740441,0.164167464079095,0.162137619091711,0.438599962275997,0.658650345873152,0,0.210289948564127,0,0.991256348951394,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0,0.949058123089023,0.658795818896044,0.502670417600539,0.795825888164603,0,0.898819408654221,0.648414149624083,0.398282546508734,0.758671603812327,0.456994050438915,0,1.01825663922657,0.387904974335251,0.0701358198903186,0.379419222745544,0.295220295959204,1.255989822731,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0.482443521363367,0.739012760666419,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.518054945597687,0.723245292907558,0,2.17562273527484,0,0.551873492609465,0.160550589987792,0.468846746368813,0.491804836130026,1.26235463602186,0.315508219416257,0.390438744296638,0.861693590931196,0.955875191810208,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0,0,0.425820255624806,0.178065603667255,0.488660878060728,0,1.32745138339963,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,1.07168517515796,0.886701168211368,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,0.847328283455281,0,0.8244312647074,0,0.301564624640779,0,0,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0,2.54967644990783,1.6794174278839,1.38199973804424,0,0.474503990371703,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.523511883968059,0.259229946583586,1.24267862617385,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.2604087696879,0.629156066554265,0.483168241652012,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.360586348559907,0,0.302899349844443,0.304827226619999,0.100826185136841,0.292373642219257,0,0.350630706544707,1.13365191807606,1.10992976687032,1.25599399253266,0.503653849092235,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.280924522409647,0.320125762024346,0,0,0.115884325944855,0.192909220463705,0,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0.09410938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|phase1_expression=0.480446541314382,1.74487703819681,3.63999391511629,3.32710632437513,7.01254021924886,1.6787927191189,2.10251376535973,1.16210991097419,0.985521055061667,1.17032263160997,1.02730780935303,0.8774937489487,0.171200729931206,0.34968160967599,0,0,0.699561878128147,0,0,0,0.255129870453209,0.397163804803541,0.261199789138935,0.799962113967033,2.06468352960453,1.14846392823004,1.7230479846363,1.50829862880122,1.52018735565099,1.51218077855958,2.66076612786366,8.89042942843484,5.53558308826113,0,5.48818077527422,1.32987716286794,6.53341940039581,1.67412652294763,0.7813353445238,2.09409497589519,3.52938892818609,2.73218193983378,1.45653105909346,1.88845226963366,1.62203089951223,1.10128051297009,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0.671130424230945,2.17608642603403,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0.338844532069132,0,1.3498495759221,0,0.7104801149461,0.299600110518405,1.92109152660777,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0,0.530083353332288,0.529000920747499,8.98579914975201,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.421333260395256,1.02258193546835,1.55871602761721,1.06001872353102,0.14084341977668,1.28326477414318,0,0,3.68034769719064,2.78695852022608,6.0662933401774,0.22836775943812,0.258937883647172,0.742210695324124,0.520455980298408,0,0.461230994512117,0.60289056221049,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0,0.41889341362691,1.27728527604296,1.91704199209472,1.79970819298022,2.41433431438823,0.299581278809645,0.457500602818626,0,0,0.767146371990992,0.41557608911912,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0.772043721344145,2.55747149456033,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0,0.493679549740441,0.164167464079095,0.162137619091711,0.438599962275997,0.658650345873152,0,0.210289948564127,0,0.991256348951394,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0,0.949058123089023,0.658795818896044,0.502670417600539,0.795825888164603,0,0.898819408654221,0.648414149624083,0.398282546508734,0.758671603812327,0.456994050438915,0,1.01825663922657,0.387904974335251,0.0701358198903186,0.379419222745544,0.295220295959204,1.255989822731,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0.482443521363367,0.739012760666419,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.518054945597687,0.723245292907558,0,2.17562273527484,0,0.551873492609465,0.160550589987792,0.468846746368813,0.491804836130026,1.26235463602186,0.315508219416257,0.390438744296638,0.861693590931196,0.955875191810208,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0,0,0.425820255624806,0.178065603667255,0.488660878060728,0,1.32745138339963,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,1.07168517515796,0.886701168211368,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,0.847328283455281,0,0.8244312647074,0,0.301564624640779,0,0,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0,2.54967644990783,1.6794174278839,1.38199973804424,0,0.474503990371703,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.523511883968059,0.259229946583586,1.24267862617385,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.2604087696879,0.629156066554265,0.483168241652012,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.360586348559907,0,0.302899349844443,0.304827226619999,0.100826185136841,0.292373642219257,0,0.350630706544707,1.13365191807606,1.10992976687032,1.25599399253266,0.503653849092235,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.280924522409647,0.320125762024346,0,0,0.115884325944855,0.192909220463705,0,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0.09410938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| ||
|short_description=p@chr4:57969494..57969498,+ | |short_description=p@chr4:57969494..57969498,+ | ||
}} | }} |
Latest revision as of 15:17, 5 August 2015
Short description: | p@chr4:57969494..57969498, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:57969494..57969498, + |
Coexpression cluster: | MCL_coexpression_mm9:2157 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.29e-17 | 25 |
endo-epithelial cell | 4.24e-17 | 15 |
endodermal cell | 3.02e-16 | 20 |
intestinal epithelial cell | 1.72e-14 | 9 |
epithelial cell of alimentary canal | 1.72e-14 | 9 |
brush border epithelial cell | 3.37e-10 | 6 |
gut absorptive cell | 3.37e-10 | 6 |
enterocyte | 3.37e-10 | 6 |
columnar/cuboidal epithelial cell | 1.36e-08 | 7 |
stem cell | 1.97e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.18e-16 | 13 |
wall of intestine | 1.18e-16 | 13 |
gastrointestinal system mucosa | 1.18e-16 | 13 |
mucosa | 1.38e-16 | 15 |
epithelium of mucosa | 1.72e-14 | 9 |
gastrointestinal system epithelium | 1.72e-14 | 9 |
intestinal epithelium | 1.72e-14 | 9 |
simple columnar epithelium | 1.88e-11 | 11 |
organ component layer | 4.84e-09 | 24 |
intestine | 2.88e-07 | 31 |