FFCP PHASE1:Mm9::chr7:88258146..88258158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:88258146..88258158,+ | |||
|description=CAGE_peak_at_chr7:88258146..88258158,+ | |description=CAGE_peak_at_chr7:88258146..88258158,+ | ||
|id=chr7:88258146..88258158,+ | |id=chr7:88258146..88258158,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.32e-16!9;CL:0002251!2.32e-16!9;CL:0000239!6.52e-15!6;CL:0000677!6.52e-15!6;CL:0000212!6.52e-15!6;CL:0000584!6.52e-15!6;CL:0000075!1.14e-12!7;CL:0000066!9.06e-10!25;CL:0002076!3.04e-09!15;CL:0000473!3.24e-08!3;CL:0000627!3.24e-08!3;CL:0000682!3.24e-08!3 | |ontology_enrichment_celltype=CL:0002563!2.32e-16!9;CL:0002251!2.32e-16!9;CL:0000239!6.52e-15!6;CL:0000677!6.52e-15!6;CL:0000212!6.52e-15!6;CL:0000584!6.52e-15!6;CL:0000075!1.14e-12!7;CL:0000066!9.06e-10!25;CL:0002076!3.04e-09!15;CL:0000473!3.24e-08!3;CL:0000627!3.24e-08!3;CL:0000682!3.24e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.51e-24,6;CL:0000677,5.51e-24,6;CL:0000584,5.51e-24,6;CL:0000075,1.68e-20,7;CL:0002563,7.55e-16,9;CL:0002251,7.55e-16,9;CL:0000682,9.82e-13,3;CL:0000066,7.63e-12,25;CL:0002076,2.59e-09,15;CL:0000223,7.45e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.85e-21!15;UBERON:0001242!3.49e-17!13;UBERON:0000060!3.49e-17!13;UBERON:0001262!3.49e-17!13;UBERON:0004786!3.49e-17!13;UBERON:0003350!2.32e-16!9;UBERON:0004808!2.32e-16!9;UBERON:0001277!2.32e-16!9;UBERON:0000160!4.73e-16!43;UBERON:0000485!4.00e-13!11;UBERON:0004923!2.19e-12!24;UBERON:0005409!1.80e-10!59 | |ontology_enrichment_uberon=UBERON:0000344!1.85e-21!15;UBERON:0001242!3.49e-17!13;UBERON:0000060!3.49e-17!13;UBERON:0001262!3.49e-17!13;UBERON:0004786!3.49e-17!13;UBERON:0003350!2.32e-16!9;UBERON:0004808!2.32e-16!9;UBERON:0001277!2.32e-16!9;UBERON:0000160!4.73e-16!43;UBERON:0000485!4.00e-13!11;UBERON:0004923!2.19e-12!24;UBERON:0005409!1.80e-10!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.01e-21,15;UBERON:0000160,3.92e-20,31;UBERON:0003350,7.55e-16,9;UBERON:0004808,7.55e-16,9;UBERON:0001277,7.55e-16,9;UBERON:0001242,7.91e-15,13;UBERON:0001262,7.91e-15,13;UBERON:0004786,7.91e-15,13;UBERON:0000485,6.99e-13,11;UBERON:0004923,1.35e-12,24;UBERON:0005409,1.63e-12,47;UBERON:0001962,3.91e-09,2;UBERON:0001961,3.91e-09,2;UBERON:0001744,3.91e-09,2 | |||
|phase1_expression=0,2.44282785347553,5.0049916332849,19.0552453123303,22.5403078475856,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,3.19984845586813,4.35877634027623,2.8711598205751,4.73838195774982,3.01659725760245,0,0.504060259519861,0,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9369544857965,2.3800550999719,0,0,0.128867461322093,0,0.22237804384487,0,2.37264530772256,0,0,0,0,2.69645822596266,4.97117514711797,18.9184209591649,0,0,0,0,0,0.0701358198903186,0.569128834118316,3.24742325555125,3.767969468193,6.16985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,5.0049916332849,19.0552453123303,22.5403078475856,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,3.19984845586813,4.35877634027623,2.8711598205751,4.73838195774982,3.01659725760245,0,0.504060259519861,0,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9369544857965,2.3800550999719,0,0,0.128867461322093,0,0.22237804384487,0,2.37264530772256,0,0,0,0,2.69645822596266,4.97117514711797,18.9184209591649,0,0,0,0,0,0.0701358198903186,0.569128834118316,3.24742325555125,3.767969468193,6.16985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:88258146..88258158,+ | |short_description=p@chr7:88258146..88258158,+ | ||
}} | }} |
Latest revision as of 16:13, 5 August 2015
Short description: | p@chr7:88258146..88258158, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:88258146..88258158, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.51e-24 | 6 |
gut absorptive cell | 5.51e-24 | 6 |
enterocyte | 5.51e-24 | 6 |
columnar/cuboidal epithelial cell | 1.68e-20 | 7 |
intestinal epithelial cell | 7.55e-16 | 9 |
epithelial cell of alimentary canal | 7.55e-16 | 9 |
M cell of gut | 9.82e-13 | 3 |
epithelial cell | 7.63e-12 | 25 |
endo-epithelial cell | 2.59e-09 | 15 |
endodermal cell | 7.45e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.01e-21 | 15 |
intestine | 3.92e-20 | 31 |
epithelium of mucosa | 7.55e-16 | 9 |
gastrointestinal system epithelium | 7.55e-16 | 9 |
intestinal epithelium | 7.55e-16 | 9 |
intestinal mucosa | 7.91e-15 | 13 |
wall of intestine | 7.91e-15 | 13 |
gastrointestinal system mucosa | 7.91e-15 | 13 |
simple columnar epithelium | 6.99e-13 | 11 |
organ component layer | 1.35e-12 | 24 |
gastrointestinal system | 1.63e-12 | 47 |
gut-associated lymphoid tissue | 3.91e-09 | 2 |
mucosa-associated lymphoid tissue | 3.91e-09 | 2 |
lymphoid tissue | 3.91e-09 | 2 |